KEGG   Chlamydomonas reinhardtii: CHLRE_09g386731v5
Entry
CHLRE_09g386731v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K13095  splicing factor 1
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHLRE_09g386731v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cre03041]
    CHLRE_09g386731v5
Spliceosome [BR:cre03041]
 Complex A
  Other components
   Complex A specific factors
    CHLRE_09g386731v5
SSDB
Motif
Pfam: RRM_1 SF1-HH KH-I_KHDC4-BBP KH_1 KH_12 zf-CCHC KH_PNO1_2nd
Other DBs
NCBI-GeneID: 5720836
NCBI-ProteinID: XP_001695273
UniProt: A0A2K3DCF2
LinkDB
Position
9:131006..138736
AA seq 891 aa
MDLGEEPAMQYGGMELQTSGEALAQHQDGGHVEAQQSVAVERAVAEPAAAEAGSAEPAAG
EGQPNGAEHAAAGEGDGDGEGQGGDEQPRRRRRKWGPPALDAPGGVEGQGAASGGGGSTP
TPPPDGGEGDEAERKRRRRSRWEESDGSAAANTALAVVPAAGGGALMALFPREVVLSGGI
KVSLPSAITGAPDSSLAATDPRVKALHGELETLNRRLQNNELDIPPEGDPRRSPSPEPVY
DRNGIRQNTREIRYRERLVDARNKVVEELLREDPGFKPPTDYRPKKYWKKVYIPQDTFPT
YNFIGLIIGPRGNTQKRMQKETNTKIAIRGRGSVKEGASRDPKYDYGEEEELHVLITGER
QEDVDKAVDMIERLLEPNDDTLNEHKRLQLRELAALNGTLKDETACYVCGDTSHRGFECP
KQQAVEVYKLPEEMRQKVEELYARDVARMAGEGGGGRGPGLEDEYKSFLRLYVAGLPPIY
NDAMLRSMFEPYGHVLYAVVATDGAGNSRCFGFVHMPDAATARAARDAVDGRPLEGRPLT
VRLRSERHEPRGRGGPGGGGPGGGGGHGGLEGVDDACKLYLGQLPPSATEQLLKPLFEPF
GGVLELRLIRDRDTGALKGFGFLTMATPAAAAAVLRAMHGYRLDGKSIVVKQAGAPGGGP
GGGGPGGGGHGGGHGDHHSRLGPGRMMGPGGPFPPPGGPPPPPGGPPPPYPPPYPPPGGP
PPPYPPHHPPHYPPPGGHFPPQQGYGGHYGGPPGGPPPPYPPPGGPYGEPAYGGPPPPPY
GAPGQEHGGYGYGGGGGYGYGGPQGGYDGYGAGGYGAPPPPSYAPPGAPPPPPPDGEQPP
LPPGAEPPQHQYGGHHHQAPPPPPPGPPQQQAHEVTEYERFMAEMQRGQFS
NT seq 2676 nt   +upstreamnt  +downstreamnt
atggacctcggggaggaaccagcgatgcagtatggaggcatggagctacagacgagtggt
gaggccctggcgcagcaccaggatggcggtcacgtagaggcgcaacagtctgtggcagtg
gagcgggctgtggccgagcccgctgcggccgaggcgggctcggctgagccggccgctggt
gagggccaacccaacggcgccgagcacgcggctgcgggcgagggcgacggcgacggcgag
ggccagggcggcgacgagcagcccaggcggagacggcgtaagtgggggccgccggcactg
gatgcgccaggcggggtggaggggcagggtgctgccagcggcggtgggggctcgacgccc
acgcctccaccggacggcggcgaaggcgatgaagcggagcgcaaacggcggcgcaggagc
aggtgggaggagagcgacggcagtgctgcggccaacacggccctggcggtggtgccggca
gcgggcggcggcgcgctcatggcgctgttccccagggaggtggtgctgtcgggcggaatc
aaggtgtctctgccctccgccatcacgggcgccccagactcctccctggccgccaccgac
ccgcgcgtcaaggcgctgcacggcgagctggagacactcaacaggcggctgcagaacaac
gagctggacatccccccggagggggacccgcgccgttcgccctcgcccgagcccgtgtac
gaccgcaacggcatcaggcagaacacacgagagatacgctaccgcgagcggctggtggac
gcccgcaacaaggtggtggaggagctgctgcgcgaggaccccggcttcaagccgcccaca
gactacaggcccaagaagtactggaagaaggtgtacatcccgcaggacaccttccccacc
tacaacttcatcggcctcatcatcgggccgcgcggcaacacgcagaagcgcatgcagaag
gagaccaacaccaagatcgccatccgaggccggggcagtgtgaaggagggcgccagccgc
gaccccaagtacgactacggcgaggaggaggagctgcacgtgctcatcactggcgagcgg
caggaggacgtggacaaggcggtggacatgatcgagcgcctgctggagcccaacgacgac
acgctcaacgagcacaagcgcctgcagctgagggagctggcggcgctcaacggaacactc
aaggacgagacggcctgctacgtgtgcggcgacacctcccaccgcggcttcgagtgcccc
aagcagcaggcggtggaggtctacaagctgcctgaggagatgcgccaaaaggtggaggag
ctgtacgcgcgcgacgtggcgcgcatggcgggcgagggcggcggcgggcgcggccccggg
ctggaggacgagtacaagagcttcctcaggctgtacgtggccggcctgccacccatctac
aacgacgccatgctgaggtccatgttcgagccgtacggacacgtgctgtacgcggtggtg
gccacggacggcgccggcaacagccgctgcttcggcttcgtgcacatgccggacgccgcc
acagcccgggccgcgcgcgacgccgtggacgggcggccgctggagggccgcccgctcacg
gtgcgcctgcgcagcgagcgacacgagccgcgcgggcggggcgggccaggcggcggcggg
ccgggcggcggcggcggccacgggggtctggagggcgtggacgacgcctgcaagctgtac
ctgggccagctgccgcccagcgccacagagcagctgctcaagccgctgttcgagccgttt
ggcggtgtgctggagctgcgcctcatccgtgaccgagacacaggggcgctcaagggcttt
ggattcctgaccatggccacccccgccgccgccgccgccgtgctacgcgccatgcacggc
taccggctggacggcaagtccattgtggtcaagcaggcgggcgcgccgggaggaggcccg
ggaggcggcggcccgggcggaggcggacatggaggcggccacggcgaccaccactcgcgc
ctgggcccgggccgcatgatgggacccggcggcccgttcccgccccccggcggcccacca
cccccgcccggcggcccgccaccgccctacccgccgccctacccaccgcctggagggccc
ccgccgccctacccgccgcatcacccgccgcactacccgccgcccggcggccacttcccg
ccgcagcagggctacggcggccactacggcggcccgccgggtggccccccgccgccctac
ccgccgccaggggggccctacggcgagcccgcatatggcggcccgccgccgccgccctat
ggggctccggggcaggagcacgggggctatggctacgggggtggcgggggctacggctac
ggtgggcctcagggtggatacgacggctacggggcaggcggctacggcgcccccccgccg
ccgtcatacgccccgcccggcgccccgccgccgccgccccctgacggcgagcagccgccg
ctgccgcccggggctgagccgccgcagcaccagtacggcggccaccaccaccaggcaccg
ccgccgccgccgcccgggccgccccagcaacaggcgcacgaggtgaccgagtacgagcgc
ttcatggcggagatgcagcggggccagttctcatga

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