Chlamydomonas reinhardtii: CHLRE_09g386731v5
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Entry
CHLRE_09g386731v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K13095
splicing factor 1
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLRE_09g386731v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cre03041
]
CHLRE_09g386731v5
Spliceosome [BR:
cre03041
]
Complex A
Other components
Complex A specific factors
CHLRE_09g386731v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SF1-HH
KH-I_KHDC4-BBP
KH_1
KH_12
zf-CCHC
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
5720836
NCBI-ProteinID:
XP_001695273
UniProt:
A0A2K3DCF2
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All DBs
Position
9:131006..138736
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AA seq
891 aa
AA seq
DB search
MDLGEEPAMQYGGMELQTSGEALAQHQDGGHVEAQQSVAVERAVAEPAAAEAGSAEPAAG
EGQPNGAEHAAAGEGDGDGEGQGGDEQPRRRRRKWGPPALDAPGGVEGQGAASGGGGSTP
TPPPDGGEGDEAERKRRRRSRWEESDGSAAANTALAVVPAAGGGALMALFPREVVLSGGI
KVSLPSAITGAPDSSLAATDPRVKALHGELETLNRRLQNNELDIPPEGDPRRSPSPEPVY
DRNGIRQNTREIRYRERLVDARNKVVEELLREDPGFKPPTDYRPKKYWKKVYIPQDTFPT
YNFIGLIIGPRGNTQKRMQKETNTKIAIRGRGSVKEGASRDPKYDYGEEEELHVLITGER
QEDVDKAVDMIERLLEPNDDTLNEHKRLQLRELAALNGTLKDETACYVCGDTSHRGFECP
KQQAVEVYKLPEEMRQKVEELYARDVARMAGEGGGGRGPGLEDEYKSFLRLYVAGLPPIY
NDAMLRSMFEPYGHVLYAVVATDGAGNSRCFGFVHMPDAATARAARDAVDGRPLEGRPLT
VRLRSERHEPRGRGGPGGGGPGGGGGHGGLEGVDDACKLYLGQLPPSATEQLLKPLFEPF
GGVLELRLIRDRDTGALKGFGFLTMATPAAAAAVLRAMHGYRLDGKSIVVKQAGAPGGGP
GGGGPGGGGHGGGHGDHHSRLGPGRMMGPGGPFPPPGGPPPPPGGPPPPYPPPYPPPGGP
PPPYPPHHPPHYPPPGGHFPPQQGYGGHYGGPPGGPPPPYPPPGGPYGEPAYGGPPPPPY
GAPGQEHGGYGYGGGGGYGYGGPQGGYDGYGAGGYGAPPPPSYAPPGAPPPPPPDGEQPP
LPPGAEPPQHQYGGHHHQAPPPPPPGPPQQQAHEVTEYERFMAEMQRGQFS
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggacctcggggaggaaccagcgatgcagtatggaggcatggagctacagacgagtggt
gaggccctggcgcagcaccaggatggcggtcacgtagaggcgcaacagtctgtggcagtg
gagcgggctgtggccgagcccgctgcggccgaggcgggctcggctgagccggccgctggt
gagggccaacccaacggcgccgagcacgcggctgcgggcgagggcgacggcgacggcgag
ggccagggcggcgacgagcagcccaggcggagacggcgtaagtgggggccgccggcactg
gatgcgccaggcggggtggaggggcagggtgctgccagcggcggtgggggctcgacgccc
acgcctccaccggacggcggcgaaggcgatgaagcggagcgcaaacggcggcgcaggagc
aggtgggaggagagcgacggcagtgctgcggccaacacggccctggcggtggtgccggca
gcgggcggcggcgcgctcatggcgctgttccccagggaggtggtgctgtcgggcggaatc
aaggtgtctctgccctccgccatcacgggcgccccagactcctccctggccgccaccgac
ccgcgcgtcaaggcgctgcacggcgagctggagacactcaacaggcggctgcagaacaac
gagctggacatccccccggagggggacccgcgccgttcgccctcgcccgagcccgtgtac
gaccgcaacggcatcaggcagaacacacgagagatacgctaccgcgagcggctggtggac
gcccgcaacaaggtggtggaggagctgctgcgcgaggaccccggcttcaagccgcccaca
gactacaggcccaagaagtactggaagaaggtgtacatcccgcaggacaccttccccacc
tacaacttcatcggcctcatcatcgggccgcgcggcaacacgcagaagcgcatgcagaag
gagaccaacaccaagatcgccatccgaggccggggcagtgtgaaggagggcgccagccgc
gaccccaagtacgactacggcgaggaggaggagctgcacgtgctcatcactggcgagcgg
caggaggacgtggacaaggcggtggacatgatcgagcgcctgctggagcccaacgacgac
acgctcaacgagcacaagcgcctgcagctgagggagctggcggcgctcaacggaacactc
aaggacgagacggcctgctacgtgtgcggcgacacctcccaccgcggcttcgagtgcccc
aagcagcaggcggtggaggtctacaagctgcctgaggagatgcgccaaaaggtggaggag
ctgtacgcgcgcgacgtggcgcgcatggcgggcgagggcggcggcgggcgcggccccggg
ctggaggacgagtacaagagcttcctcaggctgtacgtggccggcctgccacccatctac
aacgacgccatgctgaggtccatgttcgagccgtacggacacgtgctgtacgcggtggtg
gccacggacggcgccggcaacagccgctgcttcggcttcgtgcacatgccggacgccgcc
acagcccgggccgcgcgcgacgccgtggacgggcggccgctggagggccgcccgctcacg
gtgcgcctgcgcagcgagcgacacgagccgcgcgggcggggcgggccaggcggcggcggg
ccgggcggcggcggcggccacgggggtctggagggcgtggacgacgcctgcaagctgtac
ctgggccagctgccgcccagcgccacagagcagctgctcaagccgctgttcgagccgttt
ggcggtgtgctggagctgcgcctcatccgtgaccgagacacaggggcgctcaagggcttt
ggattcctgaccatggccacccccgccgccgccgccgccgtgctacgcgccatgcacggc
taccggctggacggcaagtccattgtggtcaagcaggcgggcgcgccgggaggaggcccg
ggaggcggcggcccgggcggaggcggacatggaggcggccacggcgaccaccactcgcgc
ctgggcccgggccgcatgatgggacccggcggcccgttcccgccccccggcggcccacca
cccccgcccggcggcccgccaccgccctacccgccgccctacccaccgcctggagggccc
ccgccgccctacccgccgcatcacccgccgcactacccgccgcccggcggccacttcccg
ccgcagcagggctacggcggccactacggcggcccgccgggtggccccccgccgccctac
ccgccgccaggggggccctacggcgagcccgcatatggcggcccgccgccgccgccctat
ggggctccggggcaggagcacgggggctatggctacgggggtggcgggggctacggctac
ggtgggcctcagggtggatacgacggctacggggcaggcggctacggcgcccccccgccg
ccgtcatacgccccgcccggcgccccgccgccgccgccccctgacggcgagcagccgccg
ctgccgcccggggctgagccgccgcagcaccagtacggcggccaccaccaccaggcaccg
ccgccgccgccgcccgggccgccccagcaacaggcgcacgaggtgaccgagtacgagcgc
ttcatggcggagatgcagcggggccagttctcatga
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