Chlamydomonas reinhardtii: CHLRE_09g405150v5
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Entry
CHLRE_09g405150v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cre03016
]
CHLRE_09g405150v5
Enzymes [BR:
cre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CHLRE_09g405150v5
Transfer RNA biogenesis [BR:
cre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHLRE_09g405150v5
Prokaryotic type
CHLRE_09g405150v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
5723201
NCBI-ProteinID:
XP_042921451
UniProt:
A0A2K3DF61
LinkDB
All DBs
Position
9:complement(6120610..6127495)
Genome browser
AA seq
541 aa
AA seq
DB search
MLFGGAAAPLGRALAPARHAATAHAVRPSVSSPAVRSSAAPLALPSSYPRTHHAQPAFAP
PSAPAAPGTAAGCWGPPSPRGTAVFARAGLAAGGQGSAAGTGWRREEEDERIPVPEGAVP
RRLKMVVAYDGSEFAGFQFQPGKVRTVQGELERCAKRLFVGCSRMVGSSRTDGGAHAYGQ
VVHFDVYGERDNLESDTLYYNSFLPPDVRVLELSYAEEGFDSHFSACGKTYIYKFAAGLP
DPMQAKYRWWVYDRWCERSRGKPSKLSDIRLDVGAMCEAGQLLLGRHDFSAFMDAKRPAG
LGSAKRKNPKLAERGIKPERTSAKNTRILSHLSITEGVSALSGGQEVTMEVTGNGFLYRM
VRMLAAGLVEVGHGRITPQGLLKLLEKGDRSALPEAAPPTGLYLASVHYAGDAVFESRIQ
AVTDRIRLQAGSGSFGFGSRPAAGAAAAGDGASSSGALAAAGAEAEAEAVEVAAELRQTQ
GQKAAALMRAAAAARRAAAADAGGGGEGGAGEAGEEGLGLALVGTDGRVDYSKLKDRDDD
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcggcggcgcagcagcgccgctgggcagggcgctggcacccgcccggcacgcc
gccacggcgcacgctgtccgcccatccgtttcatcaccagccgtccgctcgtccgctgct
cccctcgcgctgccctcctcctacccccgcacacaccatgcccagcctgccttcgctcct
cccagcgcgccagcagcacctggcaccgctgctggctgctgggggccgcccagcccacgg
ggaactgcggtgtttgcgcgggcggggctagcagcgggcgggcaggggtcggctgctggc
acgggctggcggcgggaggaggaggacgagcgcatacccgtgcccgagggcgccgtgcca
cgtcgcctaaagatggtggtggcgtatgacgggtcagagttcgccggctttcagttccag
ccagggaaagtacggacggtgcagggtgagctggagcgctgcgccaagcggctgtttgtg
ggctgctcgcgaatggtgggctcttcacgcacagacggcggggcgcacgcgtacggccag
gtggtacatttcgacgtgtacggcgagcgggacaatctggagagcgacacactgtactac
aactccttcctgccgccggacgtgagggtgctggagctgtcgtacgcggaggagggcttc
gatagccacttcagcgcctgcggcaaaacctacatctacaagttcgctgccgggctgccc
gacccaatgcaggctaagtaccggtggtgggtatacgaccgctggtgcgagcgcagccgc
ggaaagccgagcaaactgtccgacatccggctggacgtaggcgccatgtgtgaggccggc
cagctgctgctggggcgacacgacttcagcgccttcatggacgccaagaggcccgcgggc
ctgggcagcgctaagcggaagaatccaaagctggcggaacggggaatcaagccggagcgc
acgtcagccaagaacacacgcatcctgagccacctgtccatcactgaaggcgtcagcgcg
ctcagcggcggccaggaggtcaccatggaggtcaccggcaacggattcctgtacaggatg
gtacgcatgctggcggctgggctggtggaagttgggcacggccgcatcacgccgcagggt
ttgctaaagctcctggagaaaggggaccggtcagcgctaccggaggccgcaccgcccacc
ggactgtatctggcgagcgtgcactacgcaggggatgccgtgttcgaatccaggatccaa
gcggtgaccgatcggatccgactgcaggcagggtctggatcctttggattcggatcccgg
ccggcggcgggggcagctgcggccggggacggggcgtcgtcgagcggggcactggcggcg
gctggagcggaggcggaggcggaggcagtggaggtggcggcggagcttcgccagacgcaa
ggacagaaggcggcggcactcatgcgtgcggcggcggcggcacggcgtgcggcggcggct
gatgcagggggaggtggcgagggtggggctggggaggcgggtgaggagggcctgggcctg
gcgctggtggggacggacggaagagtggattactccaagctcaaggaccgggacgacgac
cagtag
DBGET
integrated database retrieval system
