KEGG   Chlamydomonas reinhardtii: CHLRE_10g419750v5
Entry
CHLRE_10g419750v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03020  RNA polymerase
cre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CHLRE_10g419750v5
  09124 Replication and repair
   03420 Nucleotide excision repair
    CHLRE_10g419750v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cre03021]
    CHLRE_10g419750v5
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_10g419750v5
Transcription machinery [BR:cre03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     CHLRE_10g419750v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CHLRE_10g419750v5
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 5728298
NCBI-ProteinID: XP_001702786
UniProt: A0A2K3D929
LinkDB
Position
10:278444..281167
AA seq 372 aa
MAYARTRDNSRKPTISVRTLEPDYMVFELKNTDPSSANALRRAMVAEVPTIAIDLVEMEN
NTTVLNDEFLAHRLGLIPLVSRNAVYWKRPFEWSGDNDIIETAFSLDVMCEQEGVMDVTS
NDLVPLEPDAGVVPVNYHSATEKPIVICKLRRGQHLKLVARARKGIGKDHAKFIPVATAV
FQYKAQITLSASAMADMTDDEKQAFVHSDPSKTFKFNPITRMIEVENEESYMYDEECVVK
ARELGRPDLVTIRQVQDHFIFRVEGTGVLEVKSIVRQGIEILHKKCVDLETLAREAVAIA
KGQPLPERAPAAGSDMGPGGGHMDQMGGGQDMGPGGHMGMGGGDMGPGGHMGGMYGGPPG
PYGGGPGMGMYR
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggcgtacgcacgcacgcgcgacaactcgcgcaagccgaccataagcgtgcgcacgctc
gagcccgactatatggtcttcgagcttaagaacacggaccctagctcagcaaatgcgctc
cgaagagccatggttgcggaggtgcctacaatcgctatcgatcttgtggaaatggagaac
aacaccaccgtcctaaacgacgagttccttgcccatcgccttgggttgattcccctggtg
tctaggaacgcggtgtactggaagcggccgttcgagtggagcggcgacaacgacatcatt
gagacagcgttctcgctggacgtgatgtgcgagcaggagggcgtcatggacgtgaccagc
aatgacctggtgccgttagagccggacgcaggcgtggtgccggtcaattaccacagcgcg
actgagaagccaattgtcatctgcaaattgcggcgagggcagcacctaaagctggtcgcg
cgtgcgcgcaaaggcatcgggaaggaccatgcaaagttcattcccgtcgccacggcggtt
ttccagtacaaggcgcaaatcacgctcagcgcgtcggcaatggcggatatgacggacgac
gagaagcaggcttttgtgcacagtgacccgtccaaaaccttcaagttcaaccccatcacg
cgcatgattgaggtggagaacgaggagtcgtacatgtacgatgaggagtgcgttgtcaag
gcgcgcgagctggggcggccggacctggtcaccatccggcaggtgcaggaccacttcatc
ttccgcgtggagggcacgggcgtgctggaggtcaagagcattgtgcgccagggcattgag
atcctgcacaaaaagtgtgtggacctggagaccctggcgcgagaggcagtggccatcgcc
aagggacagccgcttccggagcgggcgcccgcggccgggtcggacatgggcccgggcggc
ggccacatggaccagatgggcggcggccaggacatggggccgggcggccacatgggcatg
ggcggcggggacatggggccaggcgggcacatgggcgggatgtacggcgggccacctggg
ccgtacggcggcgggccaggcatgggcatgtaccgataa

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