Chlamydomonas reinhardtii: CHLRE_10g423800v5
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Entry
CHLRE_10g423800v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CHLRE_10g423800v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_10g423800v5
DNA repair and recombination proteins [BR:
cre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
CHLRE_10g423800v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Motif
Other DBs
NCBI-GeneID:
5728221
NCBI-ProteinID:
XP_001702579
UniProt:
A8ICD8
LinkDB
All DBs
Position
10:complement(857515..867610)
Genome browser
AA seq
1076 aa
AA seq
DB search
MAHNYKDLHVLVLDVGPHMQPYLPLLHRLVFNVLNTKLLFKPLHEVAVVLYGTEGTRHEL
HDPSDAASTYPHVTVLRPLQAVGDYRDLQYFAFASDPPPPAPDEAWAVGGGAGDNDDPND
AAARPALLGLPHLTDADADAAAAALQRRVEAAGVGVAGRTADGAATAAARAVRLFGRPGP
KSDWADGLVVALDLLARARRERLEGDKRVKGLRMTLVSNFVGQSEPLDDEMAAGLVGTLE
ELGCRLEVAALDHYVPPPAAAAAATTAAAVTAGGAGAAGAAAGGVGVTASDREALAALPA
ELAAARSANLQALHGLKSQLREAPFLHLRQPAELLCLTAATEVTMTASLADLRIAPPPPP
PPPRQGAAGAAGDPMELDGAGGLQDISLKVKLYKKVQQVRVTGWTSYYSGGGAGGEGAGG
QGEGEGAAPVAAAAEPHADAYGAYGAADGGADGGGEAGGGGVGRHGLLREVEYEDPTTGE
KFDRDSLVRGYNFGAQVVPVDEVTAATAQLQFAKDFSLLGFAPEPLALVPRHRLVAEPSV
VVGADATATAALAALARAMDAPLVAGGPRPGTGAIARLKNRAAIPALVLLTPHLSHSPDV
PDCLLLSPLPYFEDIRTFFFPTFRNEQEAQDTAAALAEARATRTGVPVTAAATAPLGAAG
VSGGSSSAGGLLSGSGNSQAGGTQAGNGSSSSQPQQGEALGVRWEKLQPTQAQQDAASEL
VRLLDLGPQPLLLPTQQAAGSGGGSSSSDQRPEALQPQHTVNPHLQRAYGFITSRALDAH
AQLPHPDDDPLVDTLLRPSGAYWRPGAAAALAAAEALLNTTERVFEGRGGRTSLDGAAAG
EGDAAAEAEAGDGGDGGAGAGGGTGGVAGSVLADLLGSAAAAAGGAGAGAGGVTSVRRAT
AEEDFAAMLAAGKEPAARAVSQLGALVGELVESSPGDTLYGRALQLLAVLRAGAAAAGRA
GAFNSLLRKLAADCTAPGRGRSGFVSRLVADKLTLLSAADLPPAAGGSGPAALPHFEDDG
GAVAPAAAAAFLEDLAAAVAAEAAAGAAGVGGAGADLEETLAPAEVVVDEAFEDMD
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcgcataactacaaggacctgcatgtgttggtgctggacgtggggccgcacatgcag
ccctacctcccgctgctgcaccgcctggtgtttaatgtcttgaacaccaagctcctgttc
aagccactgcacgaggtggccgtggtgctgtacggcactgagggcacgcggcacgagctg
cacgacccatcggacgccgccagcacctacccccacgtcacagtgctgcggccgctgcag
gcggtgggtgactaccgagacctgcagtacttcgccttcgcctccgatccaccgccgccg
gcccccgatgaggcctgggccgtgggcgggggcgcgggcgacaacgacgaccccaacgac
gccgccgcccgccccgccctcctcggcctgccgcacctcaccgacgcggacgccgacgcc
gcggcggcggcgctccagcggcgcgtggaagccgcgggcgtgggcgtggcgggccgcact
gccgacggcgccgccactgcggcggcgcgcgcggtccggctgtttggtcggcccggaccc
aagtccgactgggcggatggtctggtggttgcgctggacctgttggcgcgggccaggcgg
gagcggctggagggcgacaagcgggtcaaggggctgcgcatgacgctggtgtccaacttc
gtggggcagtctgagcctctggatgacgagatggcggccggcctggtgggcacactcgag
gagctgggctgcaggctggaggtggcggcgctggaccactacgtcccgcccccggctgca
gctgcagctgcgacaactgctgcagctgtgacagcaggtggtgccggcgcggcgggggcg
gcagcgggcggggtgggcgtcacggcaagtgaccgggaggcgctggcggcgctgccggcg
gagctggcggcggcacggtcggccaacctgcaggcgctgcacggactcaagtcgcagctg
cgggaggcgcccttcctccacctgcgccagcccgccgagctgctgtgcctcaccgccgcc
accgaggtgaccatgacggcctccctggcggacctgcgcatcgcgccgccgccgccgccg
ccgccgccacgtcagggggccgccggcgcagcgggcgaccccatggagttggatggggcc
ggcgggctgcaagacatcagcctcaaggttaagctgtacaagaaggtccagcaggtccgt
gtgaccggctggacgtcctactactcgggaggaggtgcaggcggagaaggtgcaggaggc
cagggagaaggggaaggagccgcacccgtggccgcagccgcagagccgcacgccgacgcc
tacggcgcctatggcgcagccgacggcggcgcggacggcggcggcgaggctggtggcggc
ggcgtgggccggcacgggttgctgcgggaggtggagtatgaggacccgacaacaggcgag
aagtttgaccgggacagcctggtgcggggatacaactttggcgcgcaggtggtgccagtg
gacgaggtgactgccgccacggcgcagctgcagttcgccaaggacttcagcctgctgggc
ttcgcgccggagccactcgcgctggtgcccaggcaccgactggtggcggagccgtctgtg
gtggtgggtgcggacgccactgccactgcggcgctggcggcgctggctcgggccatggat
gcgccgctggtggcgggcgggccccgacccggcaccggcgccatcgcccgcctcaagaac
cgcgccgccatccccgcgctggtgctgctgacgccgcacctgagccacagccccgacgtg
cccgactgcctgctgctcagcccgctgccctactttgaggacatccgcacattcttcttc
cccaccttcaggaacgagcaggaagctcaggacacggccgcggcgctggcggaggcacgc
gccacccgcacgggcgtccccgtgaccgccgctgctacagcccccctcggcgccgccggg
gtcagcggcggcagtagcagcgccggcgggctgctatcgggctctgggaactcgcaggca
ggcggcacgcaggccggcaacggcagtagcagcagccaaccgcagcagggagaggcgctg
ggggtgcggtgggagaagctacagccgacacaggcgcagcaagatgcagcatcggagctc
gttcggttgttggacctggggccgcagccgctgctactgccgacgcagcaggctgcaggc
agtggcggcggcagtagcagcagcgaccagcggccggaggcgctacagccgcagcacacg
gtgaacccgcacctgcagcgagcgtacggcttcatcacgtcgagagctctggacgcgcac
gcacagctgccgcaccccgacgacgacccgctggtggacaccctgctgcggcccagcggc
gcctactggcggccgggggcggcggcggcgctggcggcggctgaggcgctgctcaacacc
acggagcgtgtgttcgaggggcgcggcggcaggaccagcctggatggcgccgccgccggc
gaaggcgacgccgccgcagaggccgaggcgggcgacggcggcgacggcggcgcgggcgct
ggtggcggcactggaggagttgcgggcagcgtgcttgcagacctgttgggtagcgccgcc
gccgcggcgggcggtgcgggcgctggcgctggcggcgtcaccagtgtccggagggcgacg
gcggaggaagactttgcggcaatgctggcggccggcaaagagccggcggcccgggcggtg
tctcagctgggcgcgctggtgggggagctggtggagtcatcacccggagacacgctgtac
ggcagggccctgcagctgctggcggtgctgcgggcgggggcggcggcagcggggcgggcg
ggcgccttcaactccctcctgcgcaagctggcagcggactgcaccgcgccagggcgcggc
agatcgggcttcgtgtctcgcctggtggcagacaaacttacgctcctgtccgctgcggac
ctgccgccagccgcgggcggctcgggaccagcagcactcccgcactttgaggatgacggc
ggcgcagtggcgccggcggcggcggcggcgttcctggaggacctggcggcggcggtggcg
gcggaggcggcagcaggggcggcaggtgtgggcggtgcgggcgcggacttggaggagacg
ctggctcctgctgaggtggtggtggatgaggcgtttgaagacatggactga
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