Chlamydomonas reinhardtii: CHLRE_10g427600v5
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Entry
CHLRE_10g427600v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cre04812
]
CHLRE_10g427600v5
Enzymes [BR:
cre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
CHLRE_10g427600v5
Cytoskeleton proteins [BR:
cre04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
CHLRE_10g427600v5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
KATNA1_MIT
RuvB_N
AAA_22
AAA_14
AAA_16
nSTAND_NTPase5
AAA_5
Mg_chelatase
AAA_18
IstB_IS21
TIP49
AAA_24
nSTAND3
AAA_2
AAA_7
AAA_33
AAA_25
TsaE
NPHP3_N
DUF815
PhoH
AAA_17
RNA_helicase
AAA_28
ORC-CDC6-like
GP38
Motif
Other DBs
NCBI-GeneID:
5728161
NCBI-ProteinID:
XP_001702548
UniProt:
Q9SNV7
A0A2K3D9L9
LinkDB
All DBs
Position
10
Genome browser
AA seq
558 aa
AA seq
DB search
MGGADVQAITIAVTTGRDCAMSGDYSAGCTYYENAVELITRYVRTLGDPHAIRQWSALLK
EVQDEHSSVRQCDKEARGMRVYDSVARSNSYPEMNDPRGSAAYDDGYRQPIVVCHNSGQE
DPMVWRPPTRGEGRSGAPARGAPPPRARSSQDDNKLPSWANNNNGGGGGPPARGNAAGPS
GRAGSAPRRPTGNAPAGNAAAGGSYDRPWRQNMQGKQGAAGPGGKPGDKGSAGEKAKKQY
SGPDQELAAMLERDIVDQGTSVKWDDIAGLEEAKRVLNEALVLPMIMPDFFTGIRRPVKG
VLLFGPPGTGKTMLAKAAATETSCTFFNVSSATLASKYRGESERMVRILFEMARDLAPSM
IFIDEVDSLCSQRGTANEHEASRRVKTELLTQVDGVHGSEKDKEPGPDGEPPAPKHVFVL
AATNFPWDIDEALRRRLEKRVYIPLPGQAQRLQLLKINLRDVAVAPDVNLEAVAGQMDGY
SGDDITNVCRDAAMNGMRRLVAGKTPAEIKALREAGMTGGQEPITSDDFREALRKINPSV
SKEDIKRHEEWLSVFGST
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggggggcgcggacgtgcaggcgatcaccatcgccgtgacgacggggagagactgcgcc
atgagcggggattactccgcggggtgcacgtactatgagaacgccgtggagctcatcact
cggtacgtccgcacgctgggtgacccacacgctatccggcaatggagcgcgctgctcaag
gaggtgcaagatgagcacagcagcgtacggcagtgcgacaaggaggcacggggcatgcgc
gtgtacgacagcgtcgcgcggtccaacagctaccccgagatgaacgaccctcgtggctcg
gcggcctacgatgacggctaccggcaacccattgttgtgtgccacaactcgggccaggag
gaccccatggtgtggcggccgcccacacgcggcgagggccgcagcggcgcgcccgcccgc
ggcgcgccgcctccccgcgcacgctccagccaggatgacaacaagctgccctcctgggct
aacaacaacaacggcggcggcggcggtccgcccgccagaggcaacgcggcggggccgtcg
gggcgcgccggctcggcgccacggcgaccgacaggcaacgcgccggcagggaacgctgcc
gcaggcggcagttatgacaggccctggcgccagaacatgcaggggaagcagggcgcggcg
gggccaggcggcaagcctggcgacaagggcagcgcgggcgagaaggccaagaagcagtac
tcgggtccggaccaggagctggcagccatgctggagcgagacatcgtggaccagggaacc
agcgtcaagtgggacgacattgcgggtctggaggaggccaagcgcgtgttgaacgaggcg
ctggtgctgcccatgatcatgcccgacttcttcactggcatcaggaggcccgtcaagggt
gtgctgctgttcggcccgcccgggaccggcaagaccatgctcgccaaggccgccgcgacg
gagacgtcgtgcaccttcttcaacgtctcctccgccacgctggcgtccaagtaccgtggc
gagagcgagcgcatggtgcgcatcttgtttgagatggcccgcgacctggccccctccatg
atcttcatcgacgaggtcgactcgctctgctcccagcgcggcaccgccaatgagcacgag
gccagccgccgcgtcaagacggagctgctcacgcaggtggacggcgtgcacggcagcgaa
aaggacaaggagccgggtcccgacggcgagccgccggctcccaagcacgtgttcgtgctg
gcagccaccaacttcccctgggacatcgatgaggcgctgcggcgccgcctggagaagcgc
gtgtacatcccgctgccggggcaggcgcagcggctgcagctactcaagatcaacctgcgg
gacgtggcagtggcaccggacgtgaacctggaggcggtggcgggccagatggacggctac
agcggcgacgacatcaccaacgtgtgccgcgacgccgccatgaacggcatgcggcgactg
gtggcgggcaagacgccggcggagattaaggcgctgcgcgaggcgggcatgacgggcggc
caggagcccatcacgtccgacgacttccgcgaggcactgcgcaagatcaacccgtccgtg
tccaaggaggacatcaagcggcacgaggagtggctcagcgtgttcggcagcacctag
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