Chlamydomonas reinhardtii: CHLRE_10g427700v5
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Entry
CHLRE_10g427700v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_10g427700v5
03041 Spliceosome [BR:
cre03041
]
CHLRE_10g427700v5
03036 Chromosome and associated proteins [BR:
cre03036
]
CHLRE_10g427700v5
Enzymes [BR:
cre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHLRE_10g427700v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CHLRE_10g427700v5
mRNA cycle factors
Common to processing body (P body) and stress granule
CHLRE_10g427700v5
Spliceosome [BR:
cre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CHLRE_10g427700v5
Chromosome and associated proteins [BR:
cre03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CHLRE_10g427700v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Gemini_AC4_5
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
5728159
NCBI-ProteinID:
XP_042919977
UniProt:
A0A2K3D9L7
LinkDB
All DBs
Position
10:complement(1326455..1331817)
Genome browser
AA seq
646 aa
AA seq
DB search
MAYQSGQYVPPHLRGMAMGAPPPPPPGGPGPVMGGYGGFPVAGAGAAVPGAAPFGDDRGP
RGGYGGGYGAPRGGYGGGGYGGGGRGGFGGERGGYAGRGGAGRGEGGIGFNRPYDDPFKK
AEAEKAEIDALYGAENTGINFEAYEDIPVETSGKDVPPPVHSFEDLQLPACMMENIKRCK
FTKPTPVQKHSITIGLAGRDLMACAQTGSGKTAAFCFPIIASMLMKGYQPAAGRNSRKAL
PGALVLAPTRELTSQIYDEARKFTYMTGLRPVVIYGGAPAPNQLRDLERGCDILVATPGR
LSDFIERGRVGLSSIVFLCLDEADRMLDMGFEPQIRRIVEQEDMPPVGHRQTLMFSATFP
KEIQRLASDFLANYVFLTVGRVGSSTDLIVQHIEYVTPEEKQNTLLDLISTVEQGLTLVF
VETKRGADELERILTRNQLPATSIHGDRSQEQREMALRSFKSGKTPVMVATDVAARGLDI
PHVTHVINYDLPKDIDDYVHRIGRTGRAGHKGLATAFFTDSDAPLARSLVEVLTETNQTV
PGWLQNYAARTPGYGQKGRRGGGRFGGRDFRKDNYGGGGGGGYGGGGGGGYGGGGYGGGG
YGGNRGGGGYGSGGGGYGGGGYGGGGYGGGGGGYGGGYGGHQSAWD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccagagtggtcagtatgtccctccgcatctccggggtatggctatgggggcg
cctcctcccccgcctccgggtggtccggggcctgtgatgggcggctacggcggcttccct
gtcgccggcgcgggcgcggctgttccgggtgctgcaccttttggcgatgatcgcggtcct
cgcggcggctatggcgggggctatggtgctcctcgcggtggctatggcggtggtggctac
ggtggtggtggtcgtggtggctttggtggcgagcgcggtggctacgcgggccgcggtggt
gctggtcgcggcgagggaggcatcggcttcaaccggccctatgacgatcctttcaagaag
gctgaggcggaaaaggcggagatcgatgcgctctacggcgctgagaacacgggtattaac
ttcgaggcttatgaggatattcccgtggagaccagcggcaaggacgtgccgccgccggtg
cacagcttcgaggacctccagctgcctgcgtgcatgatggagaacatcaagcgctgcaag
ttcaccaagcccacgcccgtgcagaagcactcgattaccattggtctggctggtcgcgac
ctgatggcttgcgcccagaccggctcgggcaagaccgccgcgttctgcttccccatcatc
gcgtccatgctcatgaagggctaccagcccgcggccggccgcaacagccgcaaggcgctg
cctggcgccctggtgctggctcccacccgtgagctgaccagccagatttacgacgaggcc
cgcaagttcacgtacatgacgggcctgcgccccgtggtcatctatggtggcgcccccgcg
cccaaccagctgcgtgacctggagcgcggctgcgacatcctggtcgccacgcccggccgc
ctgagcgacttcattgagcgcggccgcgtgggcctgtcctccatcgtgttcctgtgcctg
gacgaggcggaccgcatgctggacatgggcttcgagccccagatccgccgcatcgtggag
caggaggacatgccgcccgtgggccaccgccagacgctgatgttcagcgccaccttcccc
aaggagatccagcgcctggcctccgacttcctggccaactacgtcttcctgacggtgggc
cgcgtgggctcctccaccgacctgatcgtgcagcacattgagtacgtgacgccggaggag
aagcagaacacgctgctggacctgatcagcaccgtggagcagggcctgacattggtcttc
gtggagaccaagcgcggcgccgacgagcttgagcgcatcctcacccgcaaccagctgccc
gccacctccatccatggagaccgctcgcaggagcagcgtgagatggcgctgcgcagcttc
aagagcggcaagacgcccgtgatggtggccaccgacgtggcggcccgcggtctggacatt
ccccacgtgacgcacgttatcaactacgacctgcccaaggacattgacgactacgtgcac
cgcatcggtcgtaccggccgcgccggtcacaagggtctggccaccgccttcttcaccgac
tcggacgcgccgctggcgcgctcgctggtggaggtgctgacggagacgaaccagaccgtg
cccggctggctgcagaactacgccgcgcgcacgcccggctacggccagaagggccgccgc
ggtggcggccgcttcggtggccgcgacttccgtaaggacaactacggcggtggtggcggc
ggtggctacggtggcggcggcggcggcggctacggcggtggcggctacggcggcggcggc
tacggcggcaaccgtggcggtggcggctacggcagcggcggcggtggctatggtggtggc
ggctacggcggtggcggctacggcggcggcggtggcggctacggcggcggctacggcggc
caccagtccgcttgggattaa
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integrated database retrieval system
