Chlamydomonas reinhardtii: CHLRE_10g428433v5
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Entry
CHLRE_10g428433v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHLRE_10g428433v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_10g428433v5
Enzymes [BR:
cre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CHLRE_10g428433v5
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CHLRE_10g428433v5
DNA repair and recombination proteins [BR:
cre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHLRE_10g428433v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
DUF4746
Motif
Other DBs
NCBI-GeneID:
5728140
NCBI-ProteinID:
XP_042919990
UniProt:
A0A2K3D9P3
LinkDB
All DBs
Position
10:complement(1430875..1435980)
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AA seq
528 aa
AA seq
DB search
MPELPEVEAARGLVELGCKGKTILVARVADDEKVINGCTPDELRKALEGRTLLRAHRKGK
YMWLELDNGGKGPWVMLHFGMTGGIVVKGVGVTKYKRAHLESDPESWPPRFTKLELELQG
GGRLAYVDSRRFGRIKLLPGPDPLACEPLCRLGWDVLLQLPPTAAQFGQVVRERVVRAPS
LRIKALLLDQEFCSGIGNWVADEVLYQARIHPEQTATSLDDGSMAALHAAIREVVGLAVR
VEADSDRFPRDWLFHYRWTNKKASQDASGRAIHFVTVGSRTSAFVPAVQQLKGSGAAGRA
KAAAAKEAEEGGPAAKRKRTAKKKATAEEEEEDGDGRETSADCRDSDEGGDDVDDVDEEE
EEDDDEEEEEAPTAKRRKAPAGKAAVPTTARAPRGKAASAKPLAAAAKPVRGKAAAAAGA
VSGGKPAAAKPARIAGGRAARPAAKEESEDEAEAGGEADGEAGTVAEGGDAQGKKGKASA
KPKQAGSQRATRAKAGTTIAAVESGGHAAGGQKAAPAAPAPRKGRAKK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgccggaggtcgaggcagcccgcggcctagtggagctgggctgcaagggg
aaaacaatcttggtggccagggtcgcagacgacgagaaggtcatcaacggctgcacaccg
gatgagctgcgtaaagcgctggaagggcgcacgttgttacgcgcccaccggaaagggaaa
tacatgtggctcgagctggacaacgggggcaaggggccctgggtcatgctgcacttcggc
atgactgggggcatcgtggtcaagggagtgggcgtcactaagtacaagcgtgcccacctg
gaatcggacccggagtcctggccgccgcgcttcaccaagttagagttggagctgcagggc
ggcggcaggctggcctacgtggactcgcgccggttcggccgcatcaagctgctccccggc
cccgacccgctggcctgcgagccgctgtgccggctgggctgggacgtgctgctgcagctg
ccgcccaccgccgcgcagttcggccaggtggtgcgggagcgggtggtgcgcgcgccctcg
ctgcggatcaaggcgctgctgctggaccaggagttctgcagtggcatcggcaactgggtg
gcggacgaggtgttgtaccaggcgcgcatccacccggagcagacggccacgtccctggac
gacggctctatggccgccctgcacgccgccatccgcgaggtggtgggcctggcggtgcgg
gtggaggcggactcagaccgcttccccagggactggctcttccactacaggtggacgaac
aagaaggccagccaggacgccagcgggcgcgcgattcacttcgtaaccgtgggcagccgc
acctcggcctttgtgccggcggtgcagcagctcaagggctcgggggcggccggccgggcc
aaggcagcggccgccaaggaagcggaggagggcgggcccgctgcaaagcggaaacggacc
gccaagaagaaggccaccgcggaggaggaggaggaggacggcgacggcagggagaccagc
gcggattgtagagactcggacgagggtggcgatgacgttgatgatgttgacgaggaggaa
gaggaggacgacgacgaggaggaggaggaggcgcccacggccaagcgccgcaaagctcct
gcgggcaaggctgcagtgcccaccacggccagggctccccgcgggaaggcggccagtgcc
aaacccttggccgccgcagccaagccggtaaggggcaaggctgcagcagcggctggggcc
gtgagcggcggcaagcctgctgctgccaagccagcgcggatcgcgggcgggagagcggcc
aggcccgcagcaaaggaggagtcggaggatgaggcggaggcaggtggggaggcggatggg
gaggcaggtacggtagcggagggcggagatgcacagggcaagaagggaaaagcatccgca
aagcccaagcaggcgggcagccaaagggcaacgcgtgcgaaggcaggcacgactatagcg
gctgtggagtcgggtggacacgcagctggcgggcagaaggcggcgccggcggcgccggca
ccgcgtaagggcagggccaagaagtga
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