KEGG   Chlamydomonas reinhardtii: CHLRE_10g437850v5
Entry
CHLRE_10g437850v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03013  Nucleocytoplasmic transport
cre03015  mRNA surveillance pathway
cre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHLRE_10g437850v5
  09122 Translation
   03013 Nucleocytoplasmic transport
    CHLRE_10g437850v5
   03015 mRNA surveillance pathway
    CHLRE_10g437850v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cre03019]
    CHLRE_10g437850v5
   03041 Spliceosome [BR:cre03041]
    CHLRE_10g437850v5
Messenger RNA biogenesis [BR:cre03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     CHLRE_10g437850v5
Spliceosome [BR:cre03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    CHLRE_10g437850v5
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 5716071
NCBI-ProteinID: XP_042920147
UniProt: A0A2K3DAB4
LinkDB
Position
10:2678102..2680723
AA seq 285 aa
MSKLLRVLNPAITQYRDRRFEGTEADWEHALTSSTTVYVGNLAFTTREEQLYDVFGRVGH
IKRIVMGLDKVQKTPCGFAFAIYYTRRDAEEAVAFLNGTLVDERAIRVDLDWGFVEGRQY
GRGRSGGQVRDEFRQDYDPGRGGYGKLVQAELMEQMGMGMDGGAPGGGGRENKRQRVQAE
GSGGRGGRGGQGRGSTGGRGEEAQQGGGEEAAEAEGGGGGGGGGAEERAEQVAEHAEAAG
GGAEGGAEEMEAEGAGGEAEAEAEAEAEIDEDFAGGDPEAFEGDG
NT seq 858 nt   +upstreamnt  +downstreamnt
atgtcgaaactactccgggtcttaaacccggccataacgcagtacagggatcggcgcttc
gaaggcacagaggctgactgggagcacgcactgacctccagtaccactgtgtacgtgggc
aacctggccttcaccacgcgcgaagagcagctgtacgacgtgtttgggcgggtgggccac
atcaagcgcattgttatggggctggacaaggtccaaaagacgccctgcggcttcgccttc
gccatctactacacgcggcgggacgcggaggaggcggtggcgttcctgaacggcacgttg
gtggacgagcgggccatccgtgtggatctggactggggcttcgtggaggggcgccagtac
gggcgaggtcgctcgggaggccaggtgcgtgacgagttccggcaagactacgaccccggc
cgcggcggctacggcaagctggtgcaggcggagctgatggagcagatgggcatgggcatg
gacggcggggcgccgggcggcggcggccgggaaaacaagcggcagcgcgtgcaggcagag
ggcagtggcggccgcggcggccgcggagggcagggccggggcagcacaggaggccggggc
gaggaggcacagcaaggaggaggtgaggaggcggctgaggccgagggcggaggcggagga
ggcggaggcggggccgaggagcgggcggagcaggtggcggagcacgcggaggccgcgggc
ggcggtgctgagggaggtgctgaggagatggaggcagaaggggcaggtggggaggcggag
gcggaggcggaggccgaggcggagatagatgaggacttcgcagggggcgacccagaggca
ttcgagggagacgggtga

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