Chlamydomonas reinhardtii: CHLRE_10g438700v5
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Entry
CHLRE_10g438700v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHLRE_10g438700v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_10g438700v5
Ribosome biogenesis [BR:
cre03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CHLRE_10g438700v5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Utp12
DSE1_N
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_WDR41
ASA1
Beta-prop_NOL10_N
Beta-prop_VPS8
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WDR54
CFAP251_N
Beta-prop_Nup120_160
PAC11
Beta-prop_WDR75_2nd
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_Vps41
PALB2_WD40
Beta-prop_HPS5
Beta-prop_WDR11_2nd
WD_LRWD1
Beta-prop_ACSF4
AP3D1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
5715972
NCBI-ProteinID:
XP_042920158
UniProt:
A0A2K3DAC8
LinkDB
All DBs
Position
10:2751903..2759645
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AA seq
963 aa
AA seq
DB search
MVKAYLRYEFSSAFGVISSSANPAYDASGKLLFTSALECISVWNAKQGSLVRTLSPVVAS
SSGGSGSSAAVAEVTVMTCAPTGSIIAAGYSDGTVRLWDYQSGDCAVTFKGHKSAVSSLR
YHGGGALLASGGRDTDVIVWDVVGETGLYRLRGHKDQVTDLTFLPRQSKLVSCSKDGLVK
VWDLDTQHCCQTVGGYKAEVWSLDVHPEAALLVTGATDDEIRMFAVRDPESADAGDAEPS
TAAAAGTGTGAGGRDHTVLVAMGAVKRGAASHERVALLRFSGGGGWLAVQGAGRGLEMFR
VRDEDEARRKMKRRKKRRKEKSSKKEKEGKGKGKAGAAADSDDEDDAAGVGAADDGEDGI
KAGDVLEAVQLISSKHGKIRAFAFAPPAARLPAGVACRLALALATNQIEVVDVSSESPEY
ATSSRLELPGHRSDVRCLALSPDDSALLTGSSDALKLWNPRTGACLATMDSGYALSVLFV
PGNKFAVLGTKAGSLEVYDLGAATRVHVEEGAHGGAVWSLAALPDKSGFVSGGADKSVKF
WQWSVVTTAGAGAEGGGRSLRLAHSRTVAMADDVLSVRVSPDGRLLAVALLDATVKVYYA
DSMKFFLSLYGHKLPVLCMDISSDSTLLLTGSSDKNIKVWGLDFGDCHKSLFAHGDAIMS
VAWVPGTHYAFSAGKDRLLKYWDLDRFELLLELPGHHGELWALGVSQFGDFVVTGSHDRS
IRRWERTAEPFFVEEERERRLESLFEQDLENTAADRDAAALGGEGAEGGAAAPAGRRTLE
TVSAADSIIDALEAAALEMDRLRQADKEAAEAERAGKPPPRPLPINAVMGGMPPSAYVLK
VVSGVRASELEQAVMLLPFADALKLLSYLPRWLEAGGPAVELTVRLAVLLVRLHQGALQT
TAAARPVMLGLQRRLRRAAQGLKDVVGFNMAALGHLARRARERDGGTEADGVAGVKRQLM
GPA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagcatatcttcgctatgagttttcttcagcatttggggttatcagcagctcc
gcaaacccggcctacgatgcgagcggaaagctcctcttcacatcggcactggagtgcatc
tcggtgtggaacgccaagcagggcagcctggtccgcacgctgagcccggtcgtggccagc
agcagcggcggcagtggctccagcgcggcggtggcggaggtgacggtcatgacctgcgcg
ccaaccggcagcatcattgccgccggctattctgacggcacggtccggctgtgggactac
cagtccggagactgcgcagtgacgttcaaggggcacaagtccgcagtgtccagcctgcgc
taccacggcggcggcgcgctgctggcgtccggtggccgcgacacggacgtgatcgtgtgg
gacgtcgtgggcgagaccgggctgtaccgactgcgggggcacaaggaccaggtcacggat
ctgacgttcctgccgcgccagtccaaactggtcagctgcagcaaggacggcctggtcaag
gtgtgggacctggacacgcagcactgctgccagacggtgggcggctacaaggcggaggtg
tggtcgctggacgtgcacccggaggcggcgctgctggtcacgggcgccacagacgacgag
atacgcatgttcgcggtcagggaccccgagtccgcggacgccggtgacgctgagcccagc
acggccgccgccgccggcaccggcaccggcgccggcggccgcgaccacacggtgctggtg
gctatgggcgccgtcaagcgcggcgccgccagccacgagcgcgtggcgctgctgcgcttc
agcggtggcggcggctggctggcggtacagggggcgggccgcgggctggagatgttccgg
gtgcgtgacgaggacgaggcgcggcggaagatgaagcgccgcaagaagcgccggaaggag
aagagcagcaagaaggagaaggagggcaagggcaagggcaaggcgggggctgcggcggac
agcgatgacgaggacgacgcggcgggcgtgggcgcggcggacgacggcgaggacggcatc
aaggcgggagacgtgctggaggccgtgcagctgatcagcagcaagcacggcaagatccgt
gccttcgcctttgcgccgcccgctgcgcgcctgcccgccggcgtggcgtgccgcctggcg
ctggcactcgccaccaaccagatcgaggtggtggacgtgtcttccgagtcgcccgagtac
gccacatccagccgcctggagctgcccggccaccgctccgacgtgcgctgcctggcgctc
agcccagacgactcggccctgctgaccggctccagcgacgccctcaagctgtggaacccg
cgcaccggcgcctgcctggccaccatggacagcggctacgccctcagtgtgctgttcgtg
ccgggaaacaagttcgcggtgctgggcaccaaggcgggctccctggaggtgtacgacctg
ggcgcggccacacgtgtccacgtggaggagggcgcgcacggcggcgccgtctggtcgctg
gcggcgctgcccgacaagtccggcttcgtgtcgggcggcgcggacaagtccgtcaagttc
tggcagtggagcgtcgtgaccacggcgggcgcgggcgcggagggcggcgggcgcagcctg
cggctggcgcactcgcgcacggtggccatggcggacgacgtgttgagtgtgcgtgtcagc
ccggacggaagactgctagcagtggcgctgctggacgccactgtcaaggtctactacgcc
gatagcatgaagttcttcctgtctctgtacggccacaagctgccggtgctgtgcatggac
atctcctccgactccacgctgctgctcaccggctcgtcggacaagaacatcaaggtgtgg
ggcctggacttcggcgactgccacaagtcgctgtttgcgcacggcgacgccatcatgtcc
gtggcctgggtgccgggcacgcactacgccttcagcgccggcaaggaccggctgctcaag
tactgggacctggaccgctttgagctgctgctggagctgcccggccaccacggcgagctg
tgggcgctgggcgtcagccagtttggcgacttcgtggtcacgggctctcacgaccgctcc
atccggcgctgggagcgcaccgcggagcccttctttgtggaggaggagcgcgagcgccgc
ctggagtccctgttcgaacaggacctcgaaaacacagcggccgaccgggacgcagcagcc
ctgggcggagagggcgccgagggcggcgccgccgcgccggcgggccgccgcacgctggag
acggtgagcgccgccgactcgatcattgacgccctggaggcggcggcgctggagatggac
cggttgcggcaggcggacaaggaggcggcggaggcggagcgggccggcaagccgccgccg
cggccgctgccgatcaacgcggtgatgggcggcatgccgcccagcgcgtacgtgctcaag
gttgtgtcgggcgtgcgcgccagcgagttagagcaggcagtgatgctgctgcccttcgcg
gacgcgctcaagctgctgtcctacctgccgcgctggctggaggcgggcgggccggcggtg
gagctgacggtgcggctggcggtgctgctggtgcggctgcaccagggcgcgctgcagacc
acggcggcggcgcggccggtgatgttgggactacagcggcggctgcggcgggcggcgcag
gggctgaaggacgtggtggggttcaacatggcagcgctggggcacctggcgcggcgcgcg
cgggagcgggacggcggcacggaggcggacggcgtggcgggcgtgaagcggcagctgatg
gggccggcgtga
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integrated database retrieval system