KEGG   Chlamydomonas reinhardtii: CHLRE_10g438700v5
Entry
CHLRE_10g438700v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CHLRE_10g438700v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cre03009]
    CHLRE_10g438700v5
Ribosome biogenesis [BR:cre03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    CHLRE_10g438700v5
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Utp12 DSE1_N ANAPC4_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_SCAP Beta-prop_WDR41 ASA1 Beta-prop_NOL10_N Beta-prop_VPS8 NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WDR54 CFAP251_N Beta-prop_Nup120_160 PAC11 Beta-prop_WDR75_2nd Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_Vps41 PALB2_WD40 Beta-prop_HPS5 Beta-prop_WDR11_2nd WD_LRWD1 Beta-prop_ACSF4 AP3D1 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 5715972
NCBI-ProteinID: XP_042920158
UniProt: A0A2K3DAC8
LinkDB
Position
10:2751903..2759645
AA seq 963 aa
MVKAYLRYEFSSAFGVISSSANPAYDASGKLLFTSALECISVWNAKQGSLVRTLSPVVAS
SSGGSGSSAAVAEVTVMTCAPTGSIIAAGYSDGTVRLWDYQSGDCAVTFKGHKSAVSSLR
YHGGGALLASGGRDTDVIVWDVVGETGLYRLRGHKDQVTDLTFLPRQSKLVSCSKDGLVK
VWDLDTQHCCQTVGGYKAEVWSLDVHPEAALLVTGATDDEIRMFAVRDPESADAGDAEPS
TAAAAGTGTGAGGRDHTVLVAMGAVKRGAASHERVALLRFSGGGGWLAVQGAGRGLEMFR
VRDEDEARRKMKRRKKRRKEKSSKKEKEGKGKGKAGAAADSDDEDDAAGVGAADDGEDGI
KAGDVLEAVQLISSKHGKIRAFAFAPPAARLPAGVACRLALALATNQIEVVDVSSESPEY
ATSSRLELPGHRSDVRCLALSPDDSALLTGSSDALKLWNPRTGACLATMDSGYALSVLFV
PGNKFAVLGTKAGSLEVYDLGAATRVHVEEGAHGGAVWSLAALPDKSGFVSGGADKSVKF
WQWSVVTTAGAGAEGGGRSLRLAHSRTVAMADDVLSVRVSPDGRLLAVALLDATVKVYYA
DSMKFFLSLYGHKLPVLCMDISSDSTLLLTGSSDKNIKVWGLDFGDCHKSLFAHGDAIMS
VAWVPGTHYAFSAGKDRLLKYWDLDRFELLLELPGHHGELWALGVSQFGDFVVTGSHDRS
IRRWERTAEPFFVEEERERRLESLFEQDLENTAADRDAAALGGEGAEGGAAAPAGRRTLE
TVSAADSIIDALEAAALEMDRLRQADKEAAEAERAGKPPPRPLPINAVMGGMPPSAYVLK
VVSGVRASELEQAVMLLPFADALKLLSYLPRWLEAGGPAVELTVRLAVLLVRLHQGALQT
TAAARPVMLGLQRRLRRAAQGLKDVVGFNMAALGHLARRARERDGGTEADGVAGVKRQLM
GPA
NT seq 2892 nt   +upstreamnt  +downstreamnt
atggtgaaagcatatcttcgctatgagttttcttcagcatttggggttatcagcagctcc
gcaaacccggcctacgatgcgagcggaaagctcctcttcacatcggcactggagtgcatc
tcggtgtggaacgccaagcagggcagcctggtccgcacgctgagcccggtcgtggccagc
agcagcggcggcagtggctccagcgcggcggtggcggaggtgacggtcatgacctgcgcg
ccaaccggcagcatcattgccgccggctattctgacggcacggtccggctgtgggactac
cagtccggagactgcgcagtgacgttcaaggggcacaagtccgcagtgtccagcctgcgc
taccacggcggcggcgcgctgctggcgtccggtggccgcgacacggacgtgatcgtgtgg
gacgtcgtgggcgagaccgggctgtaccgactgcgggggcacaaggaccaggtcacggat
ctgacgttcctgccgcgccagtccaaactggtcagctgcagcaaggacggcctggtcaag
gtgtgggacctggacacgcagcactgctgccagacggtgggcggctacaaggcggaggtg
tggtcgctggacgtgcacccggaggcggcgctgctggtcacgggcgccacagacgacgag
atacgcatgttcgcggtcagggaccccgagtccgcggacgccggtgacgctgagcccagc
acggccgccgccgccggcaccggcaccggcgccggcggccgcgaccacacggtgctggtg
gctatgggcgccgtcaagcgcggcgccgccagccacgagcgcgtggcgctgctgcgcttc
agcggtggcggcggctggctggcggtacagggggcgggccgcgggctggagatgttccgg
gtgcgtgacgaggacgaggcgcggcggaagatgaagcgccgcaagaagcgccggaaggag
aagagcagcaagaaggagaaggagggcaagggcaagggcaaggcgggggctgcggcggac
agcgatgacgaggacgacgcggcgggcgtgggcgcggcggacgacggcgaggacggcatc
aaggcgggagacgtgctggaggccgtgcagctgatcagcagcaagcacggcaagatccgt
gccttcgcctttgcgccgcccgctgcgcgcctgcccgccggcgtggcgtgccgcctggcg
ctggcactcgccaccaaccagatcgaggtggtggacgtgtcttccgagtcgcccgagtac
gccacatccagccgcctggagctgcccggccaccgctccgacgtgcgctgcctggcgctc
agcccagacgactcggccctgctgaccggctccagcgacgccctcaagctgtggaacccg
cgcaccggcgcctgcctggccaccatggacagcggctacgccctcagtgtgctgttcgtg
ccgggaaacaagttcgcggtgctgggcaccaaggcgggctccctggaggtgtacgacctg
ggcgcggccacacgtgtccacgtggaggagggcgcgcacggcggcgccgtctggtcgctg
gcggcgctgcccgacaagtccggcttcgtgtcgggcggcgcggacaagtccgtcaagttc
tggcagtggagcgtcgtgaccacggcgggcgcgggcgcggagggcggcgggcgcagcctg
cggctggcgcactcgcgcacggtggccatggcggacgacgtgttgagtgtgcgtgtcagc
ccggacggaagactgctagcagtggcgctgctggacgccactgtcaaggtctactacgcc
gatagcatgaagttcttcctgtctctgtacggccacaagctgccggtgctgtgcatggac
atctcctccgactccacgctgctgctcaccggctcgtcggacaagaacatcaaggtgtgg
ggcctggacttcggcgactgccacaagtcgctgtttgcgcacggcgacgccatcatgtcc
gtggcctgggtgccgggcacgcactacgccttcagcgccggcaaggaccggctgctcaag
tactgggacctggaccgctttgagctgctgctggagctgcccggccaccacggcgagctg
tgggcgctgggcgtcagccagtttggcgacttcgtggtcacgggctctcacgaccgctcc
atccggcgctgggagcgcaccgcggagcccttctttgtggaggaggagcgcgagcgccgc
ctggagtccctgttcgaacaggacctcgaaaacacagcggccgaccgggacgcagcagcc
ctgggcggagagggcgccgagggcggcgccgccgcgccggcgggccgccgcacgctggag
acggtgagcgccgccgactcgatcattgacgccctggaggcggcggcgctggagatggac
cggttgcggcaggcggacaaggaggcggcggaggcggagcgggccggcaagccgccgccg
cggccgctgccgatcaacgcggtgatgggcggcatgccgcccagcgcgtacgtgctcaag
gttgtgtcgggcgtgcgcgccagcgagttagagcaggcagtgatgctgctgcccttcgcg
gacgcgctcaagctgctgtcctacctgccgcgctggctggaggcgggcgggccggcggtg
gagctgacggtgcggctggcggtgctgctggtgcggctgcaccagggcgcgctgcagacc
acggcggcggcgcggccggtgatgttgggactacagcggcggctgcggcgggcggcgcag
gggctgaaggacgtggtggggttcaacatggcagcgctggggcacctggcgcggcgcgcg
cgggagcgggacggcggcacggaggcggacggcgtggcgggcgtgaagcggcagctgatg
gggccggcgtga

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