Chlamydomonas reinhardtii: CHLRE_10g440900v5
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Entry
CHLRE_10g440900v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHLRE_10g440900v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_10g440900v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CHLRE_10g440900v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
5716159
NCBI-ProteinID:
XP_042920189
UniProt:
A0A2K3DAH0
LinkDB
All DBs
Position
10:2996048..2997689
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AA seq
339 aa
AA seq
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MAAPAAGAAAAPVTDDVDAEAFKRLYPDQYYQRFLAEGVRPDGRPIGRARAVTIGAGTIT
TADGSALVKVGRTTVLAGVRLEIMRPDETAPAAGALVLSVEMAPFSSADYRPGRAPDHVS
AVVEKLSSALLGSGAASSAGAAAGAAGPAGGGGAVQLGSLCIAEGKAAWRALLDVYVLDA
DGCVLDAALLAAVAALRDTRIPAVRNTREGHYYAARGASATAAAEEGKEQGSGGRKGGKA
GEAGLVEGSPTAVGLGRLPLALTCCLYGKHVLVDPTADEERLAGCGVTVVVDGAGQLQGL
YKAGGRVLADTATLVRCTEAARLRHRELSALLDASLVGQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccggccgcgggcgccgcagcggcgccggtgacggacgacgtggacgctgag
gccttcaagcgcctctacccggaccagtactaccagcgcttcctggcagagggcgtgcgg
cccgacggccggcccatcggccgcgcgcgcgccgtgaccatcggcgccggcaccatcacc
accgctgacggctcggcactggtcaaggtggggcgtaccacggtgctggccggcgtgcgg
ctggagatcatgcggccggacgagacggcaccggccgccggcgcgctggtgctcagtgtg
gaaatggcgcccttctcctccgcggactaccggcccggccgggcgccggaccacgtcagc
gcggtggtggagaagctcagctccgcgctgttgggctcgggggcggcgtccagcgcaggg
gcggcagcaggggcagcggggccggcgggcggcggcggtgcggtgcagctgggcagcctg
tgcatcgcggagggcaaggcggcgtggcgcgcgctgctggacgtgtacgtgctggacgcc
gacggctgcgtgctggacgcggcgctgctggcggcggtggcggcgctgcgggacacgcgc
atcccggccgtgcgcaacacgcgcgagggccattactacgctgcgcgcggcgcgtctgca
acagcagcggccgaagaggggaaggagcagggcagcggcgggcggaaaggcggcaaggca
ggggaggcggggctggtggagggctcgcccacggccgtggggctggggcggctgccgctg
gcgctgacgtgctgcctgtacggcaagcacgtactggtggaccccacggcggacgaggag
cggctggcgggatgcggcgtgacggtggtggtggacggggcggggcagctgcagggtctg
tacaaggcgggtgggcgggtgctggcggacacggccacgctggtgcggtgcacggaggcg
gcgcggttgcggcaccgcgagctcagcgcgctgctggatgccagcctggtggggcagtag
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