KEGG   Chlamydomonas reinhardtii: CHLRE_10g440900v5
Entry
CHLRE_10g440900v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K12586  exosome complex component RRP43
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLRE_10g440900v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cre03019]
    CHLRE_10g440900v5
Messenger RNA biogenesis [BR:cre03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CHLRE_10g440900v5
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 5716159
NCBI-ProteinID: XP_042920189
UniProt: A0A2K3DAH0
LinkDB
Position
10:2996048..2997689
AA seq 339 aa
MAAPAAGAAAAPVTDDVDAEAFKRLYPDQYYQRFLAEGVRPDGRPIGRARAVTIGAGTIT
TADGSALVKVGRTTVLAGVRLEIMRPDETAPAAGALVLSVEMAPFSSADYRPGRAPDHVS
AVVEKLSSALLGSGAASSAGAAAGAAGPAGGGGAVQLGSLCIAEGKAAWRALLDVYVLDA
DGCVLDAALLAAVAALRDTRIPAVRNTREGHYYAARGASATAAAEEGKEQGSGGRKGGKA
GEAGLVEGSPTAVGLGRLPLALTCCLYGKHVLVDPTADEERLAGCGVTVVVDGAGQLQGL
YKAGGRVLADTATLVRCTEAARLRHRELSALLDASLVGQ
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggccgcgccggccgcgggcgccgcagcggcgccggtgacggacgacgtggacgctgag
gccttcaagcgcctctacccggaccagtactaccagcgcttcctggcagagggcgtgcgg
cccgacggccggcccatcggccgcgcgcgcgccgtgaccatcggcgccggcaccatcacc
accgctgacggctcggcactggtcaaggtggggcgtaccacggtgctggccggcgtgcgg
ctggagatcatgcggccggacgagacggcaccggccgccggcgcgctggtgctcagtgtg
gaaatggcgcccttctcctccgcggactaccggcccggccgggcgccggaccacgtcagc
gcggtggtggagaagctcagctccgcgctgttgggctcgggggcggcgtccagcgcaggg
gcggcagcaggggcagcggggccggcgggcggcggcggtgcggtgcagctgggcagcctg
tgcatcgcggagggcaaggcggcgtggcgcgcgctgctggacgtgtacgtgctggacgcc
gacggctgcgtgctggacgcggcgctgctggcggcggtggcggcgctgcgggacacgcgc
atcccggccgtgcgcaacacgcgcgagggccattactacgctgcgcgcggcgcgtctgca
acagcagcggccgaagaggggaaggagcagggcagcggcgggcggaaaggcggcaaggca
ggggaggcggggctggtggagggctcgcccacggccgtggggctggggcggctgccgctg
gcgctgacgtgctgcctgtacggcaagcacgtactggtggaccccacggcggacgaggag
cggctggcgggatgcggcgtgacggtggtggtggacggggcggggcagctgcagggtctg
tacaaggcgggtgggcgggtgctggcggacacggccacgctggtgcggtgcacggaggcg
gcgcggttgcggcaccgcgagctcagcgcgctgctggatgccagcctggtggggcagtag

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