Chlamydomonas reinhardtii: CHLRE_10g462700v5
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Entry
CHLRE_10g462700v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CHLRE_10g462700v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_10g462700v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
CHLRE_10g462700v5
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GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
5724162
NCBI-ProteinID:
XP_001698425
UniProt:
A0A2K3DC04
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All DBs
Position
10:5988813..5991474
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AA seq
231 aa
AA seq
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MATKGQPVYNVYPLTNYTFGNKQPKLEKDTSVQERLARLRSSYEQHGMRRSVEAVLVVQE
HNTPHVLLLQLGLNHFKLPGGRLRPGEEEVEGLRRKLTNTLAPANPSLHITWDVGEVLGV
FYRPNFDTVFYPYVPPHITRPKESRKLFVVQLPERCVFAVPKNMRLVAVPLFDLHDNLPR
YGPVITALPAVLSRLRLNLQFVLPAAPPHGHGGQQQQQQGQHGQQDGHFPP
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaaaggccaacccgtatataatgtttacccgttaaccaattacacgtttggc
aacaagcagccaaagctcgagaaggacacgagcgtgcaggagcggctagcgcggcttcgg
agtagctatgagcaacacggcatgcggcgatcggtagaggcggtcctggtggtgcaggag
cacaacacgccgcatgtgctcctgctgcagcttgggctgaaccacttcaaactgcccggg
gggcggctacggccgggcgaggaagaggtggagggcctgcgccgcaagctgaccaacaca
ctggcccccgccaacccctcgctgcacatcacttgggacgtgggggaggtgctgggcgtg
ttctaccggcccaacttcgacacggtgttttacccctacgtgccgccgcacatcacccgg
cccaaggagagccgcaagctgtttgtggtgcagctgcccgagcgctgcgtgttcgcggtg
cccaagaacatgcggctggtggcggtgccgctgtttgacctgcacgacaacctgccccgg
tacggcccggttataaccgcactgcctgccgtactgtcccggctgcggctcaacctgcag
tttgtactgccggcggcgccgccgcacgggcacggggggcagcagcagcagcagcagggg
caacacgggcagcaggacggacatttcccgccctag
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