Chlamydomonas reinhardtii: CHLRE_10g466250v5
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Entry
CHLRE_10g466250v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHLRE_10g466250v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_10g466250v5
Ribosome biogenesis [BR:
cre03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CHLRE_10g466250v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40
DUF4637
Motif
Other DBs
NCBI-GeneID:
5724008
NCBI-ProteinID:
XP_042920656
LinkDB
All DBs
Position
10:complement(6463037..6471502)
Genome browser
AA seq
1088 aa
AA seq
DB search
MAAPTSSPPALFKPFRALGYITDNVPFAVQRRGKETFVTTSVGKNFQVYNCNKLTLSLVG
PQLPGDIRCLAAKGDLTFAAVGGDVHEVKRVHRTGVYGGAHDGPVRQLLLLGEHLLSLGG
TRLVVWRLGAYSAPERVIELGAGGSFTPTCLTHPDTYLHKVLVGGDVSGGGGSGGGVGPL
QLWNYRTGQLLFSFKGWGCGVRCMAPSPALDVVGVGLADGRVVLHNVRYDEQVAAFDNAA
GAGLAAEGLLGGGAGTALAAGGSGGAVTALSFRSGAGVPLLAAGGGGGVVTVWNLEERRL
HTVIRDAHAGPLLSLHWFAGEPLLMSSAADNSLKHWVFDTGADAAPRLLRFRAGHAAPPT
LVRHYGEGGLRLLSAGCDRSFRVFSVHQDQQSRELSQKHLARRAKRLKVAQSDLRLERVV
DCDACEVRERDWANVITGHEGDPAAYTWRLAAFSLGDHVLSPPAEELYGQPAAPVTSVAL
SRCGNFGFVGSASGRIDRYNMQSGLHRGAYYAGPKPADAAAAAGQQQQQAAAGGRRGGGA
APAAAAPPPAHSGAVVGVAADGSNRLLVSVGLDGLMRVWDFRTLQLKSQVSLGGPASRLA
LHPASGLAAVGLADSSIRLYDVEGPQPRLVRRFRGHADRLTGLALSADSRWCLSAAMDGT
LRVWDVPAGQCLQVLRLGAPVTGLSLGPGLDLLATTHVNRRGVYLWSNQALFGAAFAIPH
SDAPVPVVRTALPSVLGAATGGGEDLQAGGEEAGSVGRLVQEEDEEDEDGVDSEDEEAEA
DAARRRAAAAAAAGPAAEAEAAARRRYAGRDPVSGCPLPLAPALVTLSLLPRSQWDSLAH
IEVIKARNKPLAPPKKPEAAPFFLPTLPGLSSQPVFDATAGRGADEDEDAEEEREEERRR
AGGRGGSAEPDGEAEGEEAGAGPGSRVVKLGGAGGRGGVAAAPASDFVRQLRRAARRAAA
AEPGSEAALSAWGPVLGVLRGMSATAIDRELRAIQILEGSSSEAQDVADVAALLDLLAAW
LAARRDFEFCQALLSVVLAQQGDVIAARPELAARAAGLKDVVAGGWGRLDGLLQHCRCMV
GLFGNLQQ
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccgacgagcagcccgccggctctgttcaaaccatttagggctctaggttat
attaccgataatgttcctttcgccgtgcagcggcgtggcaaagagactttcgtcacgacg
agcgtcggcaagaacttccaggtgtataactgcaacaagctgaccttgtcgctagtggga
ccgcagctgcccggcgacatccgctgcctggccgccaagggcgacctcaccttcgcggcg
gtgggcggagacgtgcacgaggtcaagagagtgcacaggacgggtgtgtacggcggcgct
catgacggcccggtgcggcagctgctgctgctgggcgagcacctgctgagcctgggcggc
acgcggctggtggtgtggcgactgggcgcgtacagcgcgcccgagcgtgtcattgagctg
ggcgccggcggctccttcacgcccacctgcctcacccaccctgacacctacctgcacaag
gtgctggtgggcggagacgtcagcggcggcggcggcagtggcggcggcgtgggtccgctg
cagctgtggaactaccgcaccggccagctgctgttcagcttcaagggctggggctgcggc
gtgcgctgcatggcgcccagccccgcgctggacgtggtgggcgtgggcctggcggacggg
cgtgtggtgctgcacaacgtgcggtacgacgagcaggtggcggcctttgacaacgccgcg
ggggcggggctggcggcggaggggctgctggggggcggcgcaggcacggccctggcggcg
ggcggcagcggcggcgcggtgacggcgttgtcgttccgcagcggcgcgggtgtgccgctg
ctggcggctggcggcggcggcggtgtggtgactgtgtggaacctggaggagcggcggctg
cacaccgtgattcgggacgcacacgccgggccgctgctgtcgctgcactggtttgcgggc
gagccgctgcttatgtcctccgccgcggacaacagcctcaagcactgggtgttcgacacg
ggggcggacgcagcgccgcggctgctgaggttcagggcggggcacgccgcgccgcccaca
ctggtgcgccactacggcgagggcggcctgcggctgctgtcggccggctgcgaccgctcc
ttccgcgtgttcagtgtgcaccaggaccaacagagccgcgagctcagtcagaagcacctg
gcgcgcagggccaagaggctcaaggtggcccagtccgacctgcgcctggagcgggtggtg
gactgcgacgcctgcgaggtgcgcgagcgcgactgggccaacgtcatcaccggccacgag
ggcgaccccgccgcctacacctggcgactggcggcgttcagcctgggcgaccacgtgctt
agcccgccggcagaggagctgtacggccagcccgccgcccccgtcacctcggtggctctc
agccgctgcggcaactttggcttcgtgggcagcgccagcggccgcatcgaccgctacaac
atgcagtccgggctgcacaggggggcctactacgcagggcccaagccggcagacgcagca
gcagcggcaggacagcagcagcagcaggcggcagccggcgggcggagaggcggcggcgcc
gcgcctgctgccgccgctccgccgcctgcgcacagcggcgcggtggtgggtgtggctgcg
gacggctccaatcggctgctggtgtcggttggcctggacggcctgatgcgggtgtgggac
ttcaggaccctgcagctcaagagccaggtgtctctgggcggccccgccagccgcctggcg
ctgcaccccgcctcgggtctggcggcggtgggtctggcggacagctccatacgcctgtac
gacgtggaggggccgcagccgcggctggtgcggcggttccgggggcacgccgaccgcctg
acgggcctggctctgagcgcagacagccgctggtgcctcagcgccgccatggacggcacg
ctgcgggtgtgggacgtgccggcggggcagtgcctgcaggtgctgcggctgggggcgccc
gtgacgggcctcagcctgggcccggggctggacctgctggccaccacacacgtcaacagg
cggggcgtgtacctgtggtccaaccaggccctgttcggcgccgcgttcgccatcccgcac
agcgacgccccggtgccggtggtgcgcaccgcgctgccctcggtgctgggggcggccact
ggcggcggggaggacctgcaggcgggcggcgaggaggcgggcagtgtggggcggctggtg
caggaggaggacgaggaggacgaggacggagtggacagcgaggacgaggaggcggaggcg
gacgcagcgcggcgccgcgccgccgccgccgccgccgctggccctgccgccgaggccgag
gcggcggcgcggcggcgctacgcgggtcgcgaccccgtgtccggctgcccgctgccgctg
gcccctgcgctggtgaccctgagcctgctgccccgcagccagtgggacagcctggcgcac
atcgaggtgatcaaggcgcgcaacaagccgctggcgccgcccaagaagcccgaggcagcg
cccttcttcctgcccacactgcccggcctgagctctcagcccgtgttcgacgccactgcg
ggccgcggggccgacgaggacgaggacgccgaggaggagcgggaggaggagcggcggcgg
gcgggcggacgcggcggctccgcggagccagacggagaggcggagggggaggaggcgggc
gcggggccgggctcccgagtggtgaagctgggcggggccggcggccggggcggtgtggcg
gcggcgcccgccagcgactttgtgcggcaactgcggcgcgcggcgcggcgggcggcggcg
gcggagcccgggtctgaggcggcgctgtctgcctggggccccgtgctgggtgtgctgcgc
ggcatgagcgccactgccattgaccgcgagctgagggccatacagatcctggagggctcc
tccagcgaggcccaggacgtggctgacgtggcggcgctgctggacctgctggcggcctgg
ctggcggcccgcagggactttgagttctgccaggcgctgctgtcagtggtgctggcgcag
cagggtgacgtgatcgcggcgcggccggagctggcggcgcgggcggccgggctcaaggac
gtggtggcgggcggctgggggcggctggatggcctgcttcagcactgccgctgcatggtg
ggcctgttcggcaacctgcagcagtag
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