KEGG   Chlamydomonas reinhardtii: CHLRE_10g466250v5
Entry
CHLRE_10g466250v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CHLRE_10g466250v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cre03009]
    CHLRE_10g466250v5
Ribosome biogenesis [BR:cre03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    CHLRE_10g466250v5
SSDB
Motif
Pfam: Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Utp21 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR75_1st Beta-prop_EML PAC11 Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_TEP1_C WDR90_beta-prop_4th ASA1 Beta-prop_Nup120_160 CFAP251_N
Other DBs
NCBI-GeneID: 5724008
NCBI-ProteinID: XP_042920656
UniProt: A0A2K3DCA0
LinkDB
Position
10:complement(6463037..6471502)
AA seq 1088 aa
MAAPTSSPPALFKPFRALGYITDNVPFAVQRRGKETFVTTSVGKNFQVYNCNKLTLSLVG
PQLPGDIRCLAAKGDLTFAAVGGDVHEVKRVHRTGVYGGAHDGPVRQLLLLGEHLLSLGG
TRLVVWRLGAYSAPERVIELGAGGSFTPTCLTHPDTYLHKVLVGGDVSGGGGSGGGVGPL
QLWNYRTGQLLFSFKGWGCGVRCMAPSPALDVVGVGLADGRVVLHNVRYDEQVAAFDNAA
GAGLAAEGLLGGGAGTALAAGGSGGAVTALSFRSGAGVPLLAAGGGGGVVTVWNLEERRL
HTVIRDAHAGPLLSLHWFAGEPLLMSSAADNSLKHWVFDTGADAAPRLLRFRAGHAAPPT
LVRHYGEGGLRLLSAGCDRSFRVFSVHQDQQSRELSQKHLARRAKRLKVAQSDLRLERVV
DCDACEVRERDWANVITGHEGDPAAYTWRLAAFSLGDHVLSPPAEELYGQPAAPVTSVAL
SRCGNFGFVGSASGRIDRYNMQSGLHRGAYYAGPKPADAAAAAGQQQQQAAAGGRRGGGA
APAAAAPPPAHSGAVVGVAADGSNRLLVSVGLDGLMRVWDFRTLQLKSQVSLGGPASRLA
LHPASGLAAVGLADSSIRLYDVEGPQPRLVRRFRGHADRLTGLALSADSRWCLSAAMDGT
LRVWDVPAGQCLQVLRLGAPVTGLSLGPGLDLLATTHVNRRGVYLWSNQALFGAAFAIPH
SDAPVPVVRTALPSVLGAATGGGEDLQAGGEEAGSVGRLVQEEDEEDEDGVDSEDEEAEA
DAARRRAAAAAAAGPAAEAEAAARRRYAGRDPVSGCPLPLAPALVTLSLLPRSQWDSLAH
IEVIKARNKPLAPPKKPEAAPFFLPTLPGLSSQPVFDATAGRGADEDEDAEEEREEERRR
AGGRGGSAEPDGEAEGEEAGAGPGSRVVKLGGAGGRGGVAAAPASDFVRQLRRAARRAAA
AEPGSEAALSAWGPVLGVLRGMSATAIDRELRAIQILEGSSSEAQDVADVAALLDLLAAW
LAARRDFEFCQALLSVVLAQQGDVIAARPELAARAAGLKDVVAGGWGRLDGLLQHCRCMV
GLFGNLQQ
NT seq 3267 nt   +upstreamnt  +downstreamnt
atggcggccccgacgagcagcccgccggctctgttcaaaccatttagggctctaggttat
attaccgataatgttcctttcgccgtgcagcggcgtggcaaagagactttcgtcacgacg
agcgtcggcaagaacttccaggtgtataactgcaacaagctgaccttgtcgctagtggga
ccgcagctgcccggcgacatccgctgcctggccgccaagggcgacctcaccttcgcggcg
gtgggcggagacgtgcacgaggtcaagagagtgcacaggacgggtgtgtacggcggcgct
catgacggcccggtgcggcagctgctgctgctgggcgagcacctgctgagcctgggcggc
acgcggctggtggtgtggcgactgggcgcgtacagcgcgcccgagcgtgtcattgagctg
ggcgccggcggctccttcacgcccacctgcctcacccaccctgacacctacctgcacaag
gtgctggtgggcggagacgtcagcggcggcggcggcagtggcggcggcgtgggtccgctg
cagctgtggaactaccgcaccggccagctgctgttcagcttcaagggctggggctgcggc
gtgcgctgcatggcgcccagccccgcgctggacgtggtgggcgtgggcctggcggacggg
cgtgtggtgctgcacaacgtgcggtacgacgagcaggtggcggcctttgacaacgccgcg
ggggcggggctggcggcggaggggctgctggggggcggcgcaggcacggccctggcggcg
ggcggcagcggcggcgcggtgacggcgttgtcgttccgcagcggcgcgggtgtgccgctg
ctggcggctggcggcggcggcggtgtggtgactgtgtggaacctggaggagcggcggctg
cacaccgtgattcgggacgcacacgccgggccgctgctgtcgctgcactggtttgcgggc
gagccgctgcttatgtcctccgccgcggacaacagcctcaagcactgggtgttcgacacg
ggggcggacgcagcgccgcggctgctgaggttcagggcggggcacgccgcgccgcccaca
ctggtgcgccactacggcgagggcggcctgcggctgctgtcggccggctgcgaccgctcc
ttccgcgtgttcagtgtgcaccaggaccaacagagccgcgagctcagtcagaagcacctg
gcgcgcagggccaagaggctcaaggtggcccagtccgacctgcgcctggagcgggtggtg
gactgcgacgcctgcgaggtgcgcgagcgcgactgggccaacgtcatcaccggccacgag
ggcgaccccgccgcctacacctggcgactggcggcgttcagcctgggcgaccacgtgctt
agcccgccggcagaggagctgtacggccagcccgccgcccccgtcacctcggtggctctc
agccgctgcggcaactttggcttcgtgggcagcgccagcggccgcatcgaccgctacaac
atgcagtccgggctgcacaggggggcctactacgcagggcccaagccggcagacgcagca
gcagcggcaggacagcagcagcagcaggcggcagccggcgggcggagaggcggcggcgcc
gcgcctgctgccgccgctccgccgcctgcgcacagcggcgcggtggtgggtgtggctgcg
gacggctccaatcggctgctggtgtcggttggcctggacggcctgatgcgggtgtgggac
ttcaggaccctgcagctcaagagccaggtgtctctgggcggccccgccagccgcctggcg
ctgcaccccgcctcgggtctggcggcggtgggtctggcggacagctccatacgcctgtac
gacgtggaggggccgcagccgcggctggtgcggcggttccgggggcacgccgaccgcctg
acgggcctggctctgagcgcagacagccgctggtgcctcagcgccgccatggacggcacg
ctgcgggtgtgggacgtgccggcggggcagtgcctgcaggtgctgcggctgggggcgccc
gtgacgggcctcagcctgggcccggggctggacctgctggccaccacacacgtcaacagg
cggggcgtgtacctgtggtccaaccaggccctgttcggcgccgcgttcgccatcccgcac
agcgacgccccggtgccggtggtgcgcaccgcgctgccctcggtgctgggggcggccact
ggcggcggggaggacctgcaggcgggcggcgaggaggcgggcagtgtggggcggctggtg
caggaggaggacgaggaggacgaggacggagtggacagcgaggacgaggaggcggaggcg
gacgcagcgcggcgccgcgccgccgccgccgccgccgctggccctgccgccgaggccgag
gcggcggcgcggcggcgctacgcgggtcgcgaccccgtgtccggctgcccgctgccgctg
gcccctgcgctggtgaccctgagcctgctgccccgcagccagtgggacagcctggcgcac
atcgaggtgatcaaggcgcgcaacaagccgctggcgccgcccaagaagcccgaggcagcg
cccttcttcctgcccacactgcccggcctgagctctcagcccgtgttcgacgccactgcg
ggccgcggggccgacgaggacgaggacgccgaggaggagcgggaggaggagcggcggcgg
gcgggcggacgcggcggctccgcggagccagacggagaggcggagggggaggaggcgggc
gcggggccgggctcccgagtggtgaagctgggcggggccggcggccggggcggtgtggcg
gcggcgcccgccagcgactttgtgcggcaactgcggcgcgcggcgcggcgggcggcggcg
gcggagcccgggtctgaggcggcgctgtctgcctggggccccgtgctgggtgtgctgcgc
ggcatgagcgccactgccattgaccgcgagctgagggccatacagatcctggagggctcc
tccagcgaggcccaggacgtggctgacgtggcggcgctgctggacctgctggcggcctgg
ctggcggcccgcagggactttgagttctgccaggcgctgctgtcagtggtgctggcgcag
cagggtgacgtgatcgcggcgcggccggagctggcggcgcgggcggccgggctcaaggac
gtggtggcgggcggctgggggcggctggatggcctgcttcagcactgccgctgcatggtg
ggcctgttcggcaacctgcagcagtag

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