Chlamydomonas reinhardtii: CHLRE_10g467000v5
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Entry
CHLRE_10g467000v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K04638
intraflagellar transport protein 57
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cre03037
]
CHLRE_10g467000v5
Cilium and associated proteins [BR:
cre03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
CHLRE_10g467000v5
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
CALCOCO1
ArlX
Mod_r
DUF4047
Syntaxin_2
Seryl_tRNA_N
Fib_alpha
Leuk-A4-hydro_C
V-SNARE
ING
DUF948
TPR_IF140_C
TPR_MLP1_2
TMEM120A-B
DUF3450
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
5724201
NCBI-ProteinID:
XP_042920667
UniProt:
A0A2K3DCC1
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All DBs
Position
10:complement(6537470..6540862)
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AA seq
469 aa
AA seq
DB search
MSSKRGGRSSLAKAPEEAVNGEAFAPEASPPPPGDDGDAGGEDGGAPAPPPPPATKGGPV
AVGRSLEIQTTPDVCMEMLADKLKLLNYEADFCRKKKPYRKPLSRLYFAVPLANSSEQFF
YFTSLATWLLGLAGVELPAPKEFDDPNLTCQNILGAVKKLGFAPPSYHPTKLTVGNGKEV
VGVLDGLVDFVLERRHHKYSRPAYGNDGQPEEGVQLDDEAEAAAMEGADELAMPAQNQAD
DDEEEEGVYVDPGRGDAAGPGTGASAAMDAEKAVLVSKVDPTLWKIELERVAPKLRITIA
ADSKDWRSHLDEAHQHKEVISKAWPDSKTSLERLRADLNGTLEKLQTREKFLNEQFESLM
QQYRAARTTFTDVQETYNRKTEAVADRNQEMHRIGETLEEVKAMMDEKGSNIADATPVAR
IKTAIKQLNKELHDMEVRIGVVSHTLLQLSLRNKRLLQAQAALSDEEED
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaagcggggtgggcggtcatccttagcaaaggcgcccgaagaggcggtaaat
ggcgaggcatttgcgcctgaggcatctccccctccacccggcgacgatggagatgctggt
ggggaggacggtggcgcgcctgcgccccctccgcccccggctacaaagggcggtccagta
gctgtaggaaggtcgctggagatacaaacaacgccggacgtgtgcatggaaatgctggcc
gacaagctgaagctgctaaactacgaggcggatttctgcaggaagaagaagccctaccgg
aaacccctctcgcggctctattttgcggtgccgctcgcaaactcgagcgagcagttcttc
tactttaccagtctggcgacctggctgctgggcctggctggcgtggagctgcccgctccc
aaggagtttgatgacccgaacttgacgtgccagaacatcctgggtgcggtgaagaagctg
ggctttgcgccgcccagctaccaccctaccaagctcacagtgggcaacggcaaggaggtg
gtgggtgtgctggacgggctggtggacttcgtgctggagcggcggcaccacaagtacagc
cggcccgcgtacggaaatgatgggcaaccggaggagggcgtgcaactggacgatgaggcg
gaggctgccgcgatggagggtgcggatgagctggcgatgccagcccagaaccaggcggat
gacgatgaggaggaggagggcgtatacgtggacccggggcgcggtgacgccgcgggccca
gggacaggggcatccgcggcgatggacgcggagaaggcggtgcttgtgtccaaggtggac
cccacgctctggaagatcgagctggagcgcgtggcgccgaagctgcgtatcaccatcgcc
gccgactcgaaggactggcgctcacatctggatgaggcgcaccagcacaaggaggtgatc
agcaaggcctggcccgacagcaagacgtcgctggagcgcctgcgtgcggacctgaacggc
acgctggagaagctgcagacgcgtgagaagttcctcaacgagcagtttgagagcctcatg
cagcagtaccgcgccgcccgcaccacgttcacggacgtgcaggagacatacaaccgcaag
acggaggcggtggcggaccggaaccaggagatgcaccgcatcggcgagacgctggaggag
gtgaaggccatgatggacgagaagggcagcaacatcgcggacgccacgcctgtggctcgc
atcaagaccgccatcaagcagcttaacaaggagctgcacgacatggaggtgcgcatcggc
gtggttagccacacgctgctgcagctatcgctgcgcaacaagcgattgctgcaggcgcag
gcggctctcagtgacgaggaggaggactag
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