Chlamydomonas reinhardtii: CHLRE_11g482483v5 Help Entry CHLRE_11g482483v5 CDS       T01039                                  Name (RefSeq) uncharacterized protein   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism cre  Chlamydomonas reinhardtii Pathway cre03018   RNA degradation Brite KEGG Orthology (KO) [BR:cre00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CHLRE_11g482483v5  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cre03019]     CHLRE_11g482483v5 Enzymes [BR:cre01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      CHLRE_11g482483v5 Messenger RNA biogenesis [BR:cre03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      CHLRE_11g482483v5   mRNA degradation factors    3'-5' decay     Ski complex      CHLRE_11g482483v5 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT DEAD MTR4-like_stalk MTR4_beta-barrel DEXQc_Suv3 Helicase_C ResIII Motif Other DBs NCBI-GeneID:  66055372 NCBI-ProteinID:  XP_042919774 UniProt:  A0A2K3D8T8 LinkDB All DBs Position 11:3655973..3672343 Genome browser AA seq 1531 aa AA seqDB search MAPDASSAQLDALLQPRMELLYGSSGDAVLVPSRGEQLPPLVQPPPLNLLPALGGAGGCE AVLAAVRAAYLAHDPDPAAAAGPGAGGGALLAEMAHPLVAVWPRAPAWPDVSLPGALVEA TPPPQGGDEGEVGWRLVDLLPPPATTGSSSSSSAAASSATASSATAAAGSSAGRVDSLAL QRRLAARGGGGGDSSWRGVSVSATPYMPGGGVAVLGPSGPAAAEAGSGRWLAELEAAEAG GLPPVCAPGLSRGLFGAWADGGAAFDLSAVATAATSASSASTAATAGGGGGGGRVAFLPP LPLVTPSGERITPLADALQGGGGGGGRGGGVAGTFADLWLEPELAAATAADEEEEGEGEE RGQGQAVAGAVAGGTGAAAEDVVEADSELAKVLAAAGGAAAAAADTAARRDQKRAAGGGA GGGKAAAGGGGKLAPGTTAEHPFAARNSIRNVEEQFNELRPRLALHYPFELDGFQKEAVL HLEGGRSVFVAAHTSAGKTVVAEYAFALATRHCTRAIYTSPIKTISNQKFRDFSSKFEVG LLTGDVQVKPTAPCLIMTTEILRSMLYKGADLIRDVEVVVFDEVHYVNDVDRGVVWEEVI IMLPPHITLVLLSATVPNVMDFADWVGRTKRKVIHVTGTTKRPVPLEHSLYYAGEIYPIC SREVFNAEGVRKVQAAHKARNAPPSAASSSGGGGRGGGGGGGGGFAGRGGGGGGPGGRGS GGAGGGGGGYLRGGPPSGADNARKQIATASRGGGANSSSGGLRGERQQLLELVGVLGKKQ MLPVAVFCFSKKRCDSAADALSSLDLSSGGEKAAVHGFMERCLGRLKEGDRQLPQILRLR DMMKRGVAVHHAGLLPIMKEVVEMLFCQGYIKVLFCTETFAMGVNAPTRTVVFHSVRKHD GKNFRFLLPGEYTQMAGRAGRRGLDAVGHVLLAVWDDGRDMQAGESELRAMLTGRGVKLE SQFRLTYGMILNLLRVEDLKVEDMLKRSFAEFHAQRTAPAGAAELAAVEAELAAAAAAAW PATALGCGREEVEAYADVCEAIERLSGQLQDTLASNKSFQQALVPGRLVLYDNPVNGLTE PAVVLGDAPAAASSSSSSSSSSSGVGVGSSSSSLRGAGAAGLAPGGVGGGSGVGGVSTAA AAATPDPRRLYLLVLHRPAAADAEHEAAAAAERAKAGGGGGWAAGAAAGGGGGGGGGGFG GMTSLSVVGVCRARLRLDGVEEVLGCGGDWAADSVRRALTAALRGVAKAVDEAAAAGGGE LPLLDPRVDFKLADVGAVQALMARAALQAQRASLRPHRDPGLAEAYSAVRRQRRLQARRQ QLRHRLSDASLQQLPEFEQRVRVLQRLGYLAPDRSVTLKGRVCCEIQSTQDELVASEAVF SGLLGELSPEEAVALLSALVFQEKSEVEPVLPPALAAARQALVALTASTAAAQREEGLDI SPTEHVAEVLHCGLMEVVYEWARGTPFSAITELTDVMEGSIVRAMVRLDGACRELQDAAR VMGNTALFQLMAAASAAIKRDVIFAASLYVA NT seq 4596 nt NT seq  +upstreamnt  +downstreamnt atggcgccagacgcgagctcggcgcagctggacgccttgctccagccgcgaatggagctg ctgtatggatctagtggcgatgcagtgctggtaccgtctcggggcgagcagctgcctccg ttagtgcagcccccaccgctcaacctgctcccggcgctgggcggcgcgggcggctgcgag gctgtgctggcggcggtgcgggcggcctacttggcacacgacccagacccggcggcggcg gcggggccgggcgcgggcggaggcgccctgctggcggaaatggcccaccctctggtggct gtgtggcctcgtgcccccgcctggcccgacgtgtcgctgccgggggcgctggtggaggcc acgccgccgccgcagggtggcgatgagggcgaagtgggctggcggctggtggacctactg ccgcccccggccaccaccggcagtagcagcagcagcagtgctgcagcctcgtctgctaca gcctcgtctgctacagccgccgccggctccagcgccggccgtgtggacagcctggccctg cagcggcggctggcggcgcggggcggcggcggcggcgactccagctggcggggcgtgtcc gtgtcggcaaccccctacatgccgggcggcggtgtggcggtgctgggtccctccggcccg gcggcggcggaggcggggtcgggcaggtggctggcggagctggaggcggcggaggcgggt ggtctgccgcccgtgtgtgcgcccggcctgagccggggcctcttcggagcctgggccgat ggcggcgccgcctttgacctgtcggcagtagcaacagcagccacctccgcctcctccgcc tccacagctgctacagccggcggcggcggcggcggcggtcgtgtggcattcctgccgccg ctgccgctggtgactccgtcgggggagcgcatcacgccgcttgcggatgcgctgcagggc ggcggcggcggcggcggccggggcgggggtgttgcgggcacgtttgcggatctgtggctg gagccggagctggcagcagctacggcggcagacgaggaggaggagggggagggggaggag cgggggcaggggcaggcggtggcaggagcagttgcaggagggacaggggccgcggcggaa gatgtggtggaggcggatagcgagctggccaaagtgctggcggcggctggcggggcggcg gcggcggcggcggacacagcggcgcggcgggaccagaagcgtgcagccggcggcggcgcc ggcggcggcaaggcggcggcgggtggcggcggcaagttggctcccggcacgacggccgag cacccctttgcggcgcgcaactccattcgcaatgtggaggagcagttcaacgagctccgc ccccggctggcgctgcactacccctttgagctggacggctttcagaaggaggcggtgttg cacctggagggcggcaggagcgtgttcgtggcggcacacaccagtgccggcaagacggtg gtggccgagtacgccttcgcgctggctacccgccactgcacgcgcgccatctacaccagc cccatcaagaccatcagtaaccagaagttcagggacttcagctccaagttcgaggtgggc ctgctgacgggtgatgtgcaggtcaagcccaccgcgccctgcctcatcatgaccactgag atcctcaggtccatgctgtacaagggtgccgacctgatccgagatgtggaggtggtggtg tttgacgaggtgcactatgtgaacgacgtggaccgaggagtggtgtgggaggaggtgatc atcatgctgccgccgcacatcactctggtgctgctgtccgccaccgtgcccaacgtcatg gactttgcggactgggtgggtcgcaccaagcgcaaggtcatacacgtgaccggcaccacc aagcgccctgtgccgctggagcacagcctctactacgcgggggagatctaccccatatgc agcagggaggtgttcaacgcggagggggtgcgtaaggtacaggcggcgcacaaggcccgc aacgcgccgccctcggccgcctcatcctcgggaggcggcggcaggggcggaggcggaggc ggaggcggaggcttcgcaggccggggcggcggcggaggcggcccgggcggccgtggaagt ggaggggctggcggcggcggcggcgggtacctgcggggcggccctcccagcggcgccgac aatgcgcgcaaacagattgcgaccgcctcccgcggcggcggcgccaacagcagctcgggc ggcctgcgcggggagcggcagcagctgttggagctggtgggggtgctgggcaagaagcag atgctgcccgtggccgtgttctgcttcagcaagaagaggtgcgactcggccgcggacgcg ctgtcctcgctggacctgtccagtggcggcgagaaggcggcggtgcacggcttcatggag cggtgcctgggccggctcaaggagggggacaggcagctgccgcagatcctgcgcctccgt gacatgatgaagcggggtgttgctgtgcaccatgccggcctgctgcccatcatgaaggag gtggtggagatgttgttctgccaggggtacatcaaggtgctgttctgtacggagacgttt gccatgggtgtgaacgcgcccacccgcacggtggtgttccacagcgtgcggaaacacgac ggcaagaacttcaggttcctgctgcctggcgagtacacccagatggcgggccgtgcgggc cgtcgcgggctggacgcggtgggtcacgtgttgctggcggtgtgggacgacggccgagac atgcaggcgggcgagtccgagcttcgtgccatgctgacgggtcggggcgtgaagctggag agccagttcagactgacgtacggcatgatcctaaacctgctgcgagtggaggacctcaag gtggaggacatgctgaagcgctccttcgcagagttccacgcccagcgcaccgcgcccgcg ggggcggcggagctggcggctgtggaggcggagctggcggcggcggcggcggcggcctgg cccgccacggctctggggtgtgggcgggaggaggtggaggcgtacgcggacgtgtgtgag gctattgagcggctgagcgggcagctgcaggacaccctggcctccaacaagtccttccag caggcgctggtgccgggccgactggtgctgtacgacaaccccgtcaacggcctcacagag cccgcggtggtgctgggggacgcacccgccgccgccagcagtagcagtagcagcagcagc agcagcagtggcgtcggtgttggcagtagcagcagctcattacgaggagccggcgccgcc ggcctcgcgccggggggagtcgggggtgggagtggggttggtggcgtgtcaaccgccgcc gccgccgccacgcccgacccgcggcggttgtatctgttggtgctgcaccggccggcggcg gcggatgcggagcacgaggcggcggcggcggcggagagggcgaaggcgggaggtggcggc ggctgggcggcaggggctgcagcaggcggcggcggtggcggcggtggcggcggcttcggc ggcatgacctccttgtcggtggtgggcgtgtgccgcgcccgcctgcggctggacggtgtg gaggaggtgttggggtgcggcggcgactgggcggcggacagcgtgcggcgggccctcacg gcggcgctgaggggggtcgccaaggccgtggacgaggcggcggcggcgggcggcggcgag ctgccgctgctggacccgcgtgtggacttcaagctcgcggacgtgggggcggtgcaggcg ctgatggcccgggcggcgctgcaggcccagcgcgccagcctgcgcccgcaccgcgacccc ggcctcgcggaggcgtactcggcggtgcggcggcagcggcggctgcaggcgcggcggcag cagctgcggcaccgcctcagcgacgccagcctgcagcagctgcccgagttcgagcagcgt gtgcgtgtgcttcagcgccttggctacctggcgcccgaccgctctgtcaccctcaagggc cgagtgtgctgcgagatacagtccacacaggacgagctggtggcctctgaggctgtgttc agtgggctgctgggggagctgagtccggaggaggccgtggcgctgctgtcggcactggtg ttccaggagaagtcagaggtggagcctgtgctgccgcccgcgctggcggcggctcggcag gcgctggtggcgctgacggcctccaccgccgccgcccagcgggaggaggggctggacatc agtcccacggagcacgtggcggaggtgctgcactgcggactcatggaggtggtgtacgag tgggcccgcggcacgcccttctcagccatcacggagctgacggacgtgatggagggctcc atcgtgagggccatggtgcgcctggacggggcgtgccgggagctacaggacgcggcgcgg gtgatgggcaacacggcgctgttccagctcatggccgccgccagcgccgccatcaagcgc gacgtcatattcgccgcctcgctgtacgtggcgtga

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