Chlamydomonas reinhardtii: CHLRE_12g492250v5
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Entry
CHLRE_12g492250v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cre03016
]
CHLRE_12g492250v5
Enzymes [BR:
cre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CHLRE_12g492250v5
Transfer RNA biogenesis [BR:
cre03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CHLRE_12g492250v5
Prokaryotic type
CHLRE_12g492250v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Na_H_antiport_2
Motif
Other DBs
NCBI-GeneID:
5726137
NCBI-ProteinID:
XP_001700586
UniProt:
A0A2K3D1X6
LinkDB
All DBs
Position
12:complement(625689..630626)
Genome browser
AA seq
686 aa
AA seq
DB search
MSATYAPAAWPQGQRGTAAVEAGARSASGAGLGRGLLRSRGGAGGAGQGGEAPAPAHPRG
SATTAHGASSSREEARGGLVKAWGSERAGSRGVLRSPAPARGAAGGAALQPGASSAPPPA
QSGQPGREQTPNALRTGLALTWLGTNSGTPTLERNVSCTLVRLPGTVQVVDCGEGSHRQL
AAAAAGGGLELADVDGIFITHMHGDHCFGLGAALALLDGAKVARQADPARRRHHVYGPPG
LAELLRASMVVTGAAASLKLPLLITELVCSPANAHGPQPLEAATGAAAAARYTSGARAGS
AGAAVAAGRRKAEEAEQEEVAERAGAGAGAGGIMVQRLAALHMDDSPQLQAAAAAVGPRV
AGLQEIWWPPRGFNSRARAQQLDAARRAGAGAAASPYADSESDTELYEMYGSIDSDDEGG
APYGNGGGGSGWVRRPPPFVAAEGLYWEMPNCAGVTVRAAQLQHRVPCWGYVFAESVMPP
QAAAVPGARRRKVVVMGDTVSSRAIAPLAAGCDVMAHEATFAAGMEQKARIAQHSTGAMA
GAFAAAVGARALVLTHFSARYREAPVMRDRESRATGRLELEQQSYEIRALIREAAEAWGP
RKTPPPITAASDFYTFHVPLRIAAAAGPAGPAASGVAEEAEGAGEVNAGRSSSTGSRLQQ
AASVSSSSSAAAAQRGASGGRLVSRR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccacctatgcgccagcggcctggccgcaggggcagcgcgggacggcggcagtc
gaggcgggcgcacgcagtgcatcaggagcgggactagggcgcggcctgcttcgcagcaga
ggcggtgccggcggcgccggccagggtggcgaggcgcccgcacccgcacacccccgcggc
tccgcaaccactgcccacggcgccagcagcagtcgggaggaagcgaggggcggactggtc
aaggcttggggctcggagcgtgctggctcccggggcgtcctgcgctcgccagcccctgct
cggggcgcggccggaggtgcggcgctgcagccgggcgcctcatcggcgccgccgccggcg
cagtcggggcagccggggcgcgagcagacccccaacgcgctgcgtacaggcctggcgctg
acgtggctgggcaccaacagcggcacgcccacgctggagcgcaacgtgagctgcacactg
gtgcggctgcctggcacggtgcaggtggtggactgcggcgagggcagccaccggcagctg
gcggcggcggcggcgggcggcgggctggagctggcggacgtggacggcatcttcatcacg
cacatgcacggcgaccactgtttcggcctgggggcggcgctggcgctgctggatggagcc
aaggtggcgcggcaggccgaccctgcacgccgccgacaccacgtgtacgggccgcccggg
ctggcggagctgctgcgcgcctccatggtcgtgactggcgcggcggcctccctcaagctg
ccgctgctcatcaccgagctggtgtgcagccccgccaacgcccacggcccacagccgctg
gaggcggccaccggcgcggcggcggcggcgcgctacacgtcgggcgcgcgggcgggcagc
gcgggcgcggcggtggctgcggggaggaggaaggcggaggaggcggagcaggaggaggtg
gcggagcgggccggcgccggcgccggcgccggcggcattatggtgcagcggctggcggcg
ctgcacatggacgactcgccgcagctgcaggcagcggcggcggcggtgggcccgcgggtg
gccggccttcaggagatctggtggccgccgcgtggcttcaactcccgggcccgcgcgcag
cagctggacgccgcccgccgcgccggcgccggcgccgccgcctcgccgtacgctgactcc
gagtcggacacggagctgtacgaaatgtacggcagcattgacagcgatgacgagggcggc
gcgccgtacggaaatggcggcggcggcagcggctgggtgcggcggccgccgccgttcgtg
gcggctgaggggttgtactgggagatgcccaactgcgccggcgtgacggtgcgggcggcg
cagctgcagcaccgcgtgccgtgctggggctacgtgtttgcggagtcggtgatgccgccg
caggctgcggccgtgccgggagcccggcggcgcaaggtggtggtgatgggtgacacggtg
tcaagccgtgccattgcgccgctagccgccggctgcgacgtgatggcgcacgaggccacc
ttcgcggcgggcatggagcagaaggcgcgcatcgcgcagcacagcacgggcgccatggcc
ggcgccttcgcggcggcggtgggcgcgcgcgcgctggtgctcacgcacttctcggcgcgg
taccgtgaggcgccggtgatgcgggaccgcgagtctcgcgccacgggccgcctggagctg
gagcagcagtcgtacgagatccgggcgcttatacgcgaggccgccgaggcgtggggtccc
cgcaagacgccgccgcccatcaccgcagcatccgacttctacacattccacgtgccgctg
cgcatcgccgcggcagcggggccggcggggccagctgcgtcaggcgtggcagaggaggcg
gagggagccggggaggtcaatgctggcaggagcagcagcactggctctaggttgcaacag
gctgcgtctgtgtcatcctcgtcgtcggcggcggcggcacagcggggtgcgtcaggaggc
cggctggtgtctcggcgctag
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integrated database retrieval system
