Chlamydomonas reinhardtii: CHLRE_12g494100v5 Help Entry CHLRE_12g494100v5 CDS       T01039                                  Name (RefSeq) uncharacterized protein   KO K12828   splicing factor 3B subunit 1 Organism cre  Chlamydomonas reinhardtii Pathway cre03040   Spliceosome Brite KEGG Orthology (KO) [BR:cre00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CHLRE_12g494100v5  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cre03041]     CHLRE_12g494100v5    03036 Chromosome and associated proteins [BR:cre03036]     CHLRE_12g494100v5 Spliceosome [BR:cre03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     CHLRE_12g494100v5  Complex B     CHLRE_12g494100v5  Complex C    U2 SnRNP specific factors     CHLRE_12g494100v5 Chromosome and associated proteins [BR:cre03036]  Eukaryotic type   Chromatin remodeling factors    B-WICH complex     CHLRE_12g494100v5 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 Htt_N-HEAT_1 Cnd1 HEAT_EF3_N XMAP215_CLASP_TOG TIP120 Adaptin_N Motif Other DBs NCBI-GeneID:  5726113 NCBI-ProteinID:  XP_042917940 UniProt:  A0A2K3D1T9 LinkDB All DBs Position 12:complement(377413..390437) Genome browser AA seq 1321 aa AA seqDB search MADDEQRAKGVPLTGVVYDQDLYGGGDRAGYRSELVEEEEDDQDYGGRNRGLGSAAAAAR STIPDEPAEDGPGGLGFEQPKSIYEREDDYRRRRLNRIISPDRNDAFAMGDKTPDARVRT YADIMREQQLQRELDNTMVNIAKKKKEEAEAAAAAAAAGKAAAPSATTTSSMPAPAASAG DAAAAAAAGKRRNRWDQSEPAKKARSEWDTDGVEATPGLGNRWDATPGAGLTEATPGANR WDATPGVGAADATPAAGRWDDKPGGGAGAAGGRRNRWDDPTPARPSETPAGSWGGETPAG AGAGTTKRSRWDQTPALGGGATPAVGVGVTPSFFSAATPAVGALGSTPLLGMETPSLSAL GMGGGAGGGAGNVPLTPEQYQEMRLQREMWERNRPLSDEELDAMLPGEKDGYKILAPPAG YKPVVDPARKLMATPTPLVGGTPLYAMPEDNPALKADLPIAPEGLPEMKPEDMQFFSKLL QDVDEAELSAEEAKERKIMKLLLKVKNGTPPQRKSALRTLTDKSRELGAGPLFNAILPLL MQPTLEDQERHLLVKVIDRILYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIIAN LSKAAGLAQMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCLSKKSWQ ARHTGIKIVQQIAILMGCAVLPHLRSMVDIVKHGLKDENQKVKTITALCLAALAEAATPY GIESFDDVLEPLWRGIRSLRGKVLAAFLKAIGHIIPLMDAEHAFYYTREVMVVLRREFAT PDEEMKKIVLKVVKQCVGTEGVEPDYIRAEILPDFFKAFWNRRMALDRRNYKALVETTVA LANKVGCSDIVSRVVEDLKDESEPYRRMVMETIDKVITELGAADVDARLEELLIDGILYA FQEQVADDSPVMLNGFGTTVNGLGKRARPYLPQICGTIKWRLNNKSAKIRQQAADLIARI APVMKACDEEGLLGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTRMTPPIKELLP RLTPILKNRHEKVQENVIDLVGRIADRGHEYVPAREWMRICFELLDMLKAHKKAIRRATV NTFGYIAKAIGPQDVLVTLLNNLKVQERQNRVCTTVAIAIVAESCQPFTVLPALMNEYRT PELNVQNGVLKALSFMFEYIGEMGKDYIHAVTPLLEDALMDRDLVHRQTAASVVGHMALG VAGLGCEGALTHLLNYVWPNIFEVSPHVVQAVGFAVDGCRVSLGPCLVLSYVLQGLWHPA RKVRQVYWKLYNNLYIGAQDALVACYPAMSDEEPPAGAEAGEDGAPAVGNTYARHELDMM L NT seq 3966 nt NT seq  +upstreamnt  +downstreamnt atggctgacgacgagcagcgggccaagggcgtgcccttgacgggcgtcgtctacgatcag gacctatatggcgggggcgaccgcgctggatatcgtagtgagcttgttgaagaggaggag gatgatcaggactacggcggccgcaaccgcggcttgggttccgccgcagccgccgctcgc tccaccatccccgacgagccggcggaggacgggccgggcgggctgggcttcgagcagccc aagagcatctacgagcgggaggacgactaccgccgccgccgcctgaaccgcatcatctcg cccgaccgcaatgacgccttcgccatgggcgacaagacgccggacgcgcgcgtgcgcacc tacgccgacatcatgcgtgagcagcagctgcagcgcgagctggacaacaccatggtcaac atcgcgaagaagaagaaggaggaggcggaggcggcggccgccgcggcggcggcgggcaag gccgccgcgccgtcggccaccaccacctcgtccatgccagcgccggcggcgtcggcgggc gatgcggcggcggcggcggccgcgggcaagcggcgcaaccgctgggaccagtccgagccc gccaagaaggcccgctcggagtgggacacggacggcgtggaggccacccccgggctgggc aaccgctgggacgccacgcccggcgccggcctcacggaggccaccccgggcgccaaccgc tgggatgcaaccccgggagtgggggcggcggacgccacgccggcggctgggcgctgggat gacaagccaggcggcggcgcgggcgcggcgggcggccgccgcaaccgctgggacgacccc acgccagcgcggccaagcgagacgcccgcgggcagctggggcggcgagacgcctgcgggc gccggcgccggcaccaccaagcgctcgcgctgggaccagacccccgcgctgggcggcggc gccacccccgccgtcggcgtcggcgtcaccccctccttcttctccgccgccacgccggcc gtgggcgccctgggctccacgccgctgctgggcatggagacgccgtcgctgtcggcgctg ggcatgggcggcggcgcgggcggcggcgcgggcaacgtgccgctgactccggagcagtac caggagatgcggctgcagcgggagatgtgggagcgcaaccggccgctgagcgatgaggag ctcgacgccatgctgccgggggagaaggacggctacaagatcctggctccgcccgccggc tacaagccggtggtggacccggcgcgcaaactcatggccacccccacgcccctggtgggc ggcacgccgctctacgccatgcccgaggacaacccggcgctgaaggccgacctgcccatt gcgcccgaggggctgccggagatgaagccggaggacatgcagttcttcagcaagctgctg caggacgtggacgaggcggagctgtccgcggaggaggccaaggagcgcaagatcatgaag ctgctgctcaaggtcaagaacggcacgccgccgcagaggaagagcgcgctgcgcacgctg acggacaagtcgcgggagctgggcgcgggcccgctgttcaacgccatcctgccgctgctg atgcagcccaccctggaggaccaggagcggcacctgctggtcaaggtcatcgacaggatc ctgtacaagctggacgagctggtgcgcccctacgtgcacaagatcctggtggtcattgag ccgctgctgatcgacgaggactactacgcgcgcgtggaggggcgcgagatcatcgccaac ctgtccaaggccgccggcctggcgcagatgatcgcggccatgcgccccgacattgacaac atcgacgagtacgtgcgcaacaccaccgcgcgcgccttcagcgtggtggccagcgcgctg ggcatcccggcgctgctgcccttccttaaggccgtgtgcctgtccaagaagagctggcag gcgcggcacaccggcatcaagatcgtgcagcagatcgccatcctgatgggctgcgccgtg ctgccgcacctgcgctccatggtggacatcgtcaagcacggactcaaggacgagaaccag aaggtcaagaccatcactgcgctgtgcctggcggcgctggcggaggcggccacgccctac ggcatcgagtcctttgacgacgtgctggagccgctgtggcgcggcatccgctccctgcgc ggcaaggtactggcggccttcctcaaggccatcggccacatcatcccgctcatggacgcc gagcacgccttctactacacacgagaggtgatggtggtgctgcggcgcgagttcgccacg cccgacgaggagatgaagaagatcgtgctcaaggtggtgaagcagtgcgtgggcaccgag ggcgtggagcccgactacatccgggcggagatcctgcccgacttcttcaaggcgttctgg aaccggcgcatggcgctggaccggcgcaactacaaggcgctggtggagaccaccgtggcg ctggcaaacaaggtgggctgctccgacatcgtgtcgcgtgtggtggaggacctgaaggac gagagcgagccctaccgccgcatggtgatggagaccatcgacaaggtcatcaccgagctg ggcgccgctgacgtggacgcgcgcctggaggagctgctcatcgacggcatcctgtacgcc ttccaggagcaggtggcggacgactcgccggtgatgctcaacggcttcggcaccacagtc aacgggctgggcaagcgcgcgcggccctacctgccgcagatctgcggcaccatcaagtgg cgcctgaacaacaagagcgccaagatccggcagcaggcggcggacctcattgcgcgcatc gcgccggtcatgaaggcgtgcgacgaggaggggctgctggggcacctgggcgtggtgctg tacgagtacctgggagaggagtaccccgaggtgctgggctccatcctgggtgcgctcaag gccattgtgaacgtgatcggcatgacgcgcatgacgccgcccatcaaggagctgctgccg cgcctcacgcccatcctcaagaacaggcacgagaaggtgcaggagaacgtgatcgacctg gtgggtcgcatcgccgaccgcggccacgagtacgtgccggcgcgcgagtggatgcgcatc tgcttcgagctgctggacatgctcaaggcacacaagaaggccatccgccgagccaccgtc aacacgttcggctacatcgccaaggccatcggcccgcaggacgtgctggtgacgctgctg aacaacctcaaggtgcaggagcgccagaaccgcgtgtgcaccaccgtggccatcgccatc gtggccgagtcctgccagcccttcaccgtgctgcccgcgctcatgaacgagtaccgcacg cccgagctcaacgtgcagaacggagtgctcaaggctctgtcgttcatgtttgagtacatt ggcgagatgggcaaggactacatccacgccgtgacgccgctgctggaggacgcgctgatg gaccgcgacctggtgcaccgccagaccgccgcctcggtggtggggcacatggcgctgggc gtggcggggctgggctgcgagggcgcgctgacgcacctgctcaactacgtgtggcccaac atcttcgaggtgtcgccgcacgtggtgcaggcggtgggcttcgcggtggacggctgccgc gtgtcgctggggccctgcctggtgctgtcctacgtgctgcaggggctgtggcaccccgcg cgcaaggtgcggcaggtgtactggaagctgtacaacaacctgtacatcggggcgcaggac gcgctggtggcctgctaccccgccatgtcagacgaggagccgccggcgggcgcggaggcg ggcgaggacggcgcgccggcggtgggcaacacgtacgcgcggcacgagctggacatgatg ctgtga

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