KEGG   Chlamydomonas reinhardtii: CHLRE_12g503400v5
Entry
CHLRE_12g503400v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHLRE_12g503400v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cre03041]
    CHLRE_12g503400v5
Spliceosome [BR:cre03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    CHLRE_12g503400v5
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    CHLRE_12g503400v5
SSDB
Motif
Pfam: PRP38 HIND
Other DBs
NCBI-GeneID: 5716427
NCBI-ProteinID: XP_042918242
UniProt: A0A2K3D323
LinkDB
Position
12:2733577..2736588
AA seq 467 aa
MANRTDPDVKTVHGTNPQNLVEYIVRQKIYQTTYWKEKCFALTAESLLEVAVQLKSVGGT
FGGQRKPSDFLCLLLKMLQIQPDKEIIIEYIKNEDFKYVRLLGAFYMRLVGKPLEVYQYL
EPLYNDYRKVRLQTLEGAYALTHVDEVVDDMLRKDFLFDIALPRVPSRYTLEKLGQLDPR
ISVLDEEFDEAILELEAGEAAKQAAEMQAKLGNAGGAAPAAGPGAGLPLPPPPPLDSGRA
PERERDVDRERRRSPAREAERERAERERERERERDRDRGGREADFRDRDRDRDYRDRDRD
RDYRDSRRSRSRSRDRRDRGRDRDYRRSRSRSRGRDSRSRSRDRRDRDRDRGYRRSSRSP
SRSRSRDRDYRRGGGRDRRDSRSRSRSRDRDRGRDRSRSRERDRGGRGDRDRDRDGGAAP
KKEKEKAKDKPKEKAAAGGGKKAVDTEDPEIVEANKLRAKLGLKPLK
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggccaaccgcacggacccggatgttaagaccgtgcacggcacgaatccacagaacctg
gtggagtacatcgtgcgccaaaagatctatcagacgacttactggaaggagaaatgcttc
gcgctgaccgctgagtcgttgctggaggtggcggtgcagttgaagagcgtgggtggcacg
tttggagggcagcgcaagccctccgacttcctgtgcctcctgctgaagatgctgcaaatc
cagcccgacaaggagatcattattgaatacatcaaaaatgaagacttcaaatacgttcgc
ttattgggcgccttctacatgcggctggtgggcaagccgctggaagtgtaccaataccta
gaacccctctacaacgactaccgaaaggtgcggctgcagacgctggagggcgcttacgcc
ttgacgcacgtggacgaggtggttgacgacatgctgcggaaggacttcctgttcgacatc
gcgctgccacgcgtgccgtccaggtacacgcttgagaagctggggcagttagacccgcgc
atcagtgtgttggatgaggagtttgatgaggccattctggagctggaggcgggcgaggcc
gccaagcaggccgccgagatgcaggccaagctgggcaacgccggcggtgcggcgccggct
gcagggccgggcgcgggcctgccgctgccgccgccgcctcccctggactcgggtcgggcg
ccggagcgggagcgggacgtggaccgggagcggaggcgcagtccggctcgggaggcggag
cgcgagcgcgcggagcgggaacgcgagcgggaacgggagcgggatcgcgaccggggcggc
cgtgaagccgacttccgggaccgggatcgggaccgcgattaccgggaccgtgatagggac
cgggattaccgggacagccgccgcagccgcagccgctcccgagaccgcagggaccgtggc
cgcgaccgggactatcgccggagcaggagcaggagtcgcgggcgtgacagccgcagccgc
agccgtgaccggcgcgacagggaccgggaccgggggtaccgccgcagcagccggagcccc
agccggagccgcagccgggatcgggactaccgacggggcggcggccgcgacaggcgagac
agccgctcacggtcgcggtcgcgcgaccgggaccgcggccgggaccgcagccgcagccgc
gagcgggaccgcggcgggcgcggcgatcgggaccgggaccgggatggcggcgcggcacca
aagaaggagaaggaaaaggctaaggacaagccgaaggagaaggcggcggcggggggaggc
aagaaggcagtggacacagaagaccccgagattgtggaggccaacaagctgcgtgctaag
ctgggcctgaagccgctgaagtga

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