Chlamydomonas reinhardtii: CHLRE_12g503400v5
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Entry
CHLRE_12g503400v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLRE_12g503400v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cre03041
]
CHLRE_12g503400v5
Spliceosome [BR:
cre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
CHLRE_12g503400v5
Complex C
U4/U6.U5 tri-SnRNP related factors
CHLRE_12g503400v5
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
HIND
Motif
Other DBs
NCBI-GeneID:
5716427
NCBI-ProteinID:
XP_042918242
UniProt:
A0A2K3D323
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All DBs
Position
12:2733577..2736588
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AA seq
467 aa
AA seq
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MANRTDPDVKTVHGTNPQNLVEYIVRQKIYQTTYWKEKCFALTAESLLEVAVQLKSVGGT
FGGQRKPSDFLCLLLKMLQIQPDKEIIIEYIKNEDFKYVRLLGAFYMRLVGKPLEVYQYL
EPLYNDYRKVRLQTLEGAYALTHVDEVVDDMLRKDFLFDIALPRVPSRYTLEKLGQLDPR
ISVLDEEFDEAILELEAGEAAKQAAEMQAKLGNAGGAAPAAGPGAGLPLPPPPPLDSGRA
PERERDVDRERRRSPAREAERERAERERERERERDRDRGGREADFRDRDRDRDYRDRDRD
RDYRDSRRSRSRSRDRRDRGRDRDYRRSRSRSRGRDSRSRSRDRRDRDRDRGYRRSSRSP
SRSRSRDRDYRRGGGRDRRDSRSRSRSRDRDRGRDRSRSRERDRGGRGDRDRDRDGGAAP
KKEKEKAKDKPKEKAAAGGGKKAVDTEDPEIVEANKLRAKLGLKPLK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgcacggacccggatgttaagaccgtgcacggcacgaatccacagaacctg
gtggagtacatcgtgcgccaaaagatctatcagacgacttactggaaggagaaatgcttc
gcgctgaccgctgagtcgttgctggaggtggcggtgcagttgaagagcgtgggtggcacg
tttggagggcagcgcaagccctccgacttcctgtgcctcctgctgaagatgctgcaaatc
cagcccgacaaggagatcattattgaatacatcaaaaatgaagacttcaaatacgttcgc
ttattgggcgccttctacatgcggctggtgggcaagccgctggaagtgtaccaataccta
gaacccctctacaacgactaccgaaaggtgcggctgcagacgctggagggcgcttacgcc
ttgacgcacgtggacgaggtggttgacgacatgctgcggaaggacttcctgttcgacatc
gcgctgccacgcgtgccgtccaggtacacgcttgagaagctggggcagttagacccgcgc
atcagtgtgttggatgaggagtttgatgaggccattctggagctggaggcgggcgaggcc
gccaagcaggccgccgagatgcaggccaagctgggcaacgccggcggtgcggcgccggct
gcagggccgggcgcgggcctgccgctgccgccgccgcctcccctggactcgggtcgggcg
ccggagcgggagcgggacgtggaccgggagcggaggcgcagtccggctcgggaggcggag
cgcgagcgcgcggagcgggaacgcgagcgggaacgggagcgggatcgcgaccggggcggc
cgtgaagccgacttccgggaccgggatcgggaccgcgattaccgggaccgtgatagggac
cgggattaccgggacagccgccgcagccgcagccgctcccgagaccgcagggaccgtggc
cgcgaccgggactatcgccggagcaggagcaggagtcgcgggcgtgacagccgcagccgc
agccgtgaccggcgcgacagggaccgggaccgggggtaccgccgcagcagccggagcccc
agccggagccgcagccgggatcgggactaccgacggggcggcggccgcgacaggcgagac
agccgctcacggtcgcggtcgcgcgaccgggaccgcggccgggaccgcagccgcagccgc
gagcgggaccgcggcgggcgcggcgatcgggaccgggaccgggatggcggcgcggcacca
aagaaggagaaggaaaaggctaaggacaagccgaaggagaaggcggcggcggggggaggc
aagaaggcagtggacacagaagaccccgagattgtggaggccaacaagctgcgtgctaag
ctgggcctgaagccgctgaagtga
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