KEGG   Chlamydomonas reinhardtii: CHLRE_12g504000v5
Entry
CHLRE_12g504000v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLRE_12g504000v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cre03019]
    CHLRE_12g504000v5
Enzymes [BR:cre01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     CHLRE_12g504000v5
Messenger RNA biogenesis [BR:cre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CHLRE_12g504000v5
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     CHLRE_12g504000v5
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-GeneID: 5716439
NCBI-ProteinID: XP_042918236
UniProt: A0A2K3D327
LinkDB
Position
12:complement(2678921..2682936)
AA seq 525 aa
MLGRAWSQPPRTVVVAASGAAKAPRHTLTAMTYNLLADKYARGGWHGYCPPQHLTWDSRR
ERILQEIESYSSDIICLQEVEAQVFAGELQPWLAARGYRGHYLPRQYGDSVHGPPEGVAL
FYRTEVFDLEQQHSFLFNSVPTSPPAPGSALASLADAEEPSAVGAAAAVVAAVTAAADTV
GSGRASGSEVGAVVDSDAPQAAAEAPVASTSGNAEAANSRKRERRSGSKARGASGSGSED
SSDEEEERRAAASGSGNGGGGASTSGRGRSNEFWSMFKKRQEGAILALLRHRASKRQLLA
ACTHLFWNPAFADVKAFQATVLCSEMAGFLTRHVGPDAPSSVPVVLGGDFNSVACKRVPD
VFDPKLPRDGQASGVYALLTRGSLPPSHPDHPASRRRPGEAANADFKGQPLTTSGIQLAS
SYVVAHGMDPPLTTRTNNFAGCLDYIFVSPRHFDVLRTLELPYEHSSGEEAPRGDPGRGG
AGGGKGEAAGTYPGVRDPMDVPFPPIPNEVFPSDHLSLAVVLGLR
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgttggggcgggcgtggtctcagccaccgcggacggttgtggtggcggcatcaggagca
gcaaaggcgccgcgccacacactgacagccatgacgtacaacctactagcggacaaatac
gcccgcggagggtggcacggctactgcccaccgcagcacctgacctgggactcccgccgc
gagcgtatcctgcaggagatcgagtcctacagcagcgacatcatctgcctgcaggaggtg
gaggcgcaggtgttcgcgggcgagctgcagccctggctggcggctcgcggctaccgcggc
cactacctgccccggcagtacggagacagcgtgcacggcccgcccgagggggtggcactg
ttctaccggactgaggtttttgacctcgagcagcagcactcgttcctgttcaactcggtg
cccaccagcccgcctgcgccggggtcggccttggcctcgctcgcggacgcggaagagcct
tcggccgtaggcgcagcggcagcagtagtggcagcagttacggcggcagcggatacggta
ggcagcgggagagcaagcggatcggaggtgggggcagtggtggactcggacgcgccgcag
gcggcagcagaagcccctgtggcgtcgacgtccggcaatgcggaagctgccaacagccgg
aaacgggaacggagatcagggtcgaaggcaagaggggcgtctggatcaggcagtgaggac
tcatcggacgaggaggaggagcggcgggcagcggcgagtggcagcggcaacggcggcggc
ggggctagcacgagcgggagaggtcgcagcaatgagttctggagcatgttcaagaagcgg
caagagggcgccatcttggccctgctgcggcaccgtgccagcaagcggcagctgcttgcg
gcgtgcacgcacctgttctggaatcctgcctttgcggatgtcaaggctttccaggccacc
gtgttgtgcagcgagatggcggggttcctgacgcgccacgtgggccccgacgcgcccagc
tcggtgccggtggtgctgggcggcgacttcaacagcgtggcgtgcaagcgcgtgcccgac
gtgtttgaccccaagctgccgcgtgacgggcaggctagcggtgtgtatgcgctgctcact
cgcggcagcctgccgcccagccaccccgaccaccccgccagccggcgccggcccggcgag
gcagccaacgccgacttcaaggggcagccgctcaccacctccggcatccagctggcgtcc
agctacgtcgtggcgcacggcatggacccgccgctcaccacgcgcaccaacaacttcgcg
ggctgcctggactatatcttcgtcagcccgcggcactttgacgtgctgcgcaccctagag
ctgccgtacgagcacagctcgggcgaggaggcgccccggggggatccgggcaggggcggc
gcgggtgggggaaagggcgaggcagccggcacgtacccgggtgtgagggaccccatggac
gtgcccttcccgcccatccccaatgaagtgtttccctcggaccatctgtcgctcgccgtg
gtgctgggtctgcggtga

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