Chlamydomonas reinhardtii: CHLRE_12g505700v5
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Entry
CHLRE_12g505700v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHLRE_12g505700v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cre03000
]
CHLRE_12g505700v5
03021 Transcription machinery [BR:
cre03021
]
CHLRE_12g505700v5
Transcription factors [BR:
cre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
CHLRE_12g505700v5
Transcription machinery [BR:
cre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CHLRE_12g505700v5
RNA polymerase III system
TFIIIB
CHLRE_12g505700v5
RNA polymerase I system
SL1/TIF-1B
CHLRE_12g505700v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
5716470
NCBI-ProteinID:
XP_001691004
UniProt:
A8IJX8
LinkDB
All DBs
Position
12:2546743..2549787
Genome browser
AA seq
325 aa
AA seq
DB search
MAAAEAPPATPQLSAADVEAEMAAHVSGIKPQLQNVVATVNLGTKLDLKEIAMHARNAEY
NPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDDSRTAARRYAKIVQKLGFPATFKE
FKIQNIVGSCDVKFPIRLEGLAYAHSLFASYEPELFPGLIYRMKQPKIVLLIFVSGKVVL
TGAKTRGEIYQAYMNIYPTLIQYKKGDAVVPTLPNNLMGPPRALPAAKQGGQADVGEPQQ
AQEQDGAGPSGSGAQAQAQAQQQYQQQAAAGMMPPPPVAATPAPDPNLPPPTPMHHHLPP
PTPRHPGLAATPSLSHHLPPPSPRR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggctgaggcgcccccagcgacgccacagctctcagcagcagatgtggaggcg
gaaatggcagcccacgtctctggcatcaagccccagctgcagaacgtcgtggccactgtg
aacctaggcaccaagctggacctcaaggagattgccatgcacgcgcgtaacgcagaatac
aacccaaagcgctttgccgccgtcatcatgcgcattcgagagccgaaaacaacggcgctc
atcttcgcctctggcaagatggtgtgcacgggcgccaagagcgaggatgactcccgcacg
gccgcgcgtcgttacgccaagattgtacagaagctgggcttccctgccacgttcaaggag
tttaagatccaaaacatcgtgggctcctgtgacgtcaagttccccatccgcttggagggc
ctggcgtacgcgcacagtctcttcgccagctacgagcccgagctgtttccgggcctcatc
taccgcatgaagcagcccaagattgtgctgctgatcttcgtgtcgggcaaggtggtgctg
acaggcgccaagacgcggggcgagatctaccaggcctacatgaacatctaccccacgctc
atccagtacaagaagggcgacgcggtggtgcccacgctgcccaacaacctgatgggcccg
ccgcgcgcactgccggcggcgaagcagggtggccaggcggacgtcggggagccgcagcag
gcgcaggagcaggatggcgcggggccgtctgggtcaggggcgcaggcgcaagcgcaggcg
cagcagcagtaccagcagcaggcagcggctggcatgatgccgccgccgccagtggcggcg
acgccagcgccggacccgaacctgccgccgccgacacccatgcaccaccacctgccgccg
cccacgcctcggcacccggggctggcggctacacccagcctgagccaccacctgccgccg
ccctcaccgcggcggtga
DBGET
integrated database retrieval system