Chlamydomonas reinhardtii: CHLRE_12g513500v5 Help Entry CHLRE_12g513500v5 CDS       T01039                                  Name (RefSeq) uncharacterized protein   KO K12867   pre-mRNA-splicing factor SYF1 Organism cre  Chlamydomonas reinhardtii Pathway cre03040   Spliceosome Brite KEGG Orthology (KO) [BR:cre00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CHLRE_12g513500v5  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cre03019]     CHLRE_12g513500v5    03041 Spliceosome [BR:cre03041]     CHLRE_12g513500v5 Messenger RNA biogenesis [BR:cre03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      CHLRE_12g513500v5 Spliceosome [BR:cre03041]  Complex B   Other components    Prp19-related factors     CHLRE_12g513500v5  Complex C     CHLRE_12g513500v5 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_12 TPR_15 TPR_2 PPR Motif Other DBs NCBI-GeneID:  5728536 NCBI-ProteinID:  XP_042918362 UniProt:  A0A2K3D3K4 Structure PDBPDBj LinkDB All DBs Position 12:3564985..3571638 Genome browser AA seq 925 aa AA seqDB search MALVATDAQKKAMEDLLPNQEDLLYEEELARNPYNLKMWIRYIHARADAVPKRRYLLYER AVRALPGSYKLWHAYLTERRLAVRGLRPDDVAYEALNNTFERALVSMHKMPRVWLDYLQL LMDQRLVTRTRRTFDRALGSLPITQHDRVWALYLKFIHTPGIPVETAVRLYRRYLKLEPT HAEEYVAYLKAKNRWGEAARKLAELLNDDTFRSLEGKSKHQLWLELCDMITKHPKEVEGM RVDAIIRGGIRRFTDEVGRLWTSLADYYIRRGMFEKARDVYEEGLCSVITVHDFSLIYDA YTQFEESLLSASMEQLAGDDEDEEGGKEKEGDDGTDFLLKDDGNDVDLRLARLEHLMNRR PELLSSVILRQNPHNVAEWHKRVKIFTGKPTKQILTYTEAVRTVDPDKAIGKPFTLWCAF AKFYEHHGDVANARIIFQKATEARHKYVDDLAHVWCEWAEMELRHSNFKRALDVVTRAIT PTPRPARMTPEEERALPVADRVYRNLKLHLMHTDLEESLGTRESTCAAYDRILELRIATP QVILNYALFLTEQKAFEDAFKVYERGIALFKYPHVKDIWTAYLAAFVERYGGKKLERARD LYEQAIKDAPPTECKPLYLEYAKLEETYGLARHAMDIYARALAAVPKAERKSVLDLYVSR ASDFFGIAKVREIYESAIEAEPPHELSDDDVREVCMRYSALETKLGEIDRARAIYVHGSA VSHPDRAADFWAAWRAFEVRHGNEDTFKEMMRILRSVKVSFSHTQINSIVDAARLTSKAD AEAGAGGAVAGAKRPRDGGDAMAELEAQAVAEMGLGAGAAAGGAGRGTALSGFVSAGVYQ QGADKDKEGGTAAAPQQRKPAPVAANPEEIDLDADADDDGAGAGGAEDMDVAEKAVPAGV FGSLAGLAGKGQGEGGEAAAKKQRT NT seq 2778 nt NT seq  +upstreamnt  +downstreamnt atggcgctggtagcgacggacgcgcagaagaaggccatggaggacctgctgccgaaccag gaggacctgctctatgaggaggagttggctcgcaacccttacaacctaaagatgtggatc cgctatatccatgctcgcgcggacgcagtgccgaagcggagatatctgctgtatgagcgt gccgtcagggccctgcccggctcctacaagctgtggcacgcctacctgacggagcggcgg ctggcggtgcgcggcctgcgccccgacgatgtggcctacgaggcgctaaacaacaccttc gagcgcgcactggtgtctatgcacaagatgccgcgcgtgtggctggactacctgcagctg ctgatggaccagcggctggtcacgcgcacgcggcgcacctttgaccgcgcactgggctcg ctgcccatcacgcagcacgaccgcgtgtgggcgctgtacctgaaattcattcacacgccg ggcatccccgtggagacggcggtgcggctgtaccggcgctacctgaagctggagcccacg cacgcggaggagtacgtggcctatctcaaggccaagaaccgctggggcgaggcggcacgg aagctggcggagctgctgaatgacgacacgttccgctcgctggagggcaagagcaagcac cagctgtggttggagctgtgcgacatgatcaccaagcaccccaaagaggtggagggcatg cgcgtggacgccatcatccgcggaggcatccgccgctttaccgacgaggtggggcggctg tggacctccctggccgactactacatccgccgcggcatgtttgagaaggcgcgcgacgtg tacgaggagggcctgtgctccgtcatcaccgtgcacgacttctcgctcatctacgacgct tacacgcagtttgaggagtcgttactgtccgccagcatggagcagctggcgggtgacgac gaggacgaggagggcggcaaggagaaggagggcgacgacggcacggacttcttgctgaag gacgacggcaatgacgtggacctgcggctggcccgcctggagcatctgatgaaccggcgg cctgagctgctgtcgtccgtcatcctgcgccagaacccgcacaacgtggcggagtggcac aagcgcgtcaagatcttcaccggcaagcccaccaagcagatcctcacatacaccgaggcg gtccgcaccgtggacccggacaaggccattggcaagcccttcacgctgtggtgcgccttc gctaagttctacgagcaccacggcgacgtggccaacgcacgcatcatcttccagaaggca accgaggcgcggcacaagtacgtggacgacctggcgcacgtgtggtgcgagtgggcggag atggagctgcgccacagcaacttcaagcgcgccctggacgtggtgacgcgcgccatcacg cccacgccgcgccccgcgcgcatgacgcccgaggaggagcgcgcgctgccagtggcggac cgcgtgtacaggaacctgaagctgcacctgatgcacaccgacctggaggagagcttgggc acgcgcgagtccacgtgcgccgcctacgaccgcattctggaattgcgcatcgccacgccg caggtcatcctcaactacgcgctgttcctcacagagcagaaggcattcgaggacgcgttc aaagtgtacgagcgaggcattgcgctcttcaagtacccgcacgtgaaggacatctggacc gcctacctggccgccttcgttgagcgctacggcggcaagaagctagagcgcgcccgcgac ctgtacgagcaggccatcaaggacgcgccgcccacggagtgcaagccgctgtacctggag tacgccaagctggaggagacgtacggcctggcacgacacgccatggacatatacgcgcgg gcgctggcggcggtgcccaaggccgagcgcaagtcggtgctggacctgtacgtgagccgc gcctccgacttctttgggattgccaaggtgcgcgagatctacgagtccgccatcgaggct gagccgccgcacgagctgtcggacgacgacgtgcgcgaggtatgcatgcgctactccgcg ctggagaccaagctgggcgagatcgaccgcgcacgcgccatctacgtgcacggatccgcc gtgagccaccccgaccgtgcggccgacttctgggcggcgtggcgcgcgtttgaggtgcgg cacggcaacgaggacacgttcaaggagatgatgcggatactgcggtcggtcaaggtcagc ttcagccacacgcaaatcaactccatcgtggacgcggcgcgcctcacctccaaggccgac gccgaggcaggcgcaggcggtgccgtggccggagccaagcggccgcgtgacggcggcgac gccatggcggagctcgaggcgcaggcggtggcggagatggggttgggcgcgggcgccgcc gcgggtggcgcgggccgtggcacggcactgtccgggttcgtgtcagcgggcgtgtaccag cagggcgccgacaaggacaaggaaggcggtacggcggcggcgccgcagcagcgcaagccg gcaccagtggctgctaaccctgaagagattgacctggacgctgacgcggacgacgacggc gccggtgcgggcggcgccgaggacatggacgtggctgagaaggcggtgcccgcgggtgtg ttcggttcgctggcagggctggcgggcaaggggcaaggagaaggcggggaagcggctgcc aagaagcagcgcacgtga

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