KEGG   Chlamydomonas reinhardtii: CHLRE_12g516500v5
Entry
CHLRE_12g516500v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K10609  cullin 4
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03420  Nucleotide excision repair
cre04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CHLRE_12g516500v5
  09124 Replication and repair
   03420 Nucleotide excision repair
    CHLRE_12g516500v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cre04121]
    CHLRE_12g516500v5
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_12g516500v5
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cre04147]
    CHLRE_12g516500v5
Ubiquitin system [BR:cre04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     CHLRE_12g516500v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      CHLRE_12g516500v5
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      CHLRE_12g516500v5
Exosome [BR:cre04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   CHLRE_12g516500v5
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 5728777
NCBI-ProteinID: XP_042918405
UniProt: A0A2K3D3V0
LinkDB
Position
12
AA seq 766 aa
MSAVRGKGGAPLGGLAPVAGSANTQQAKKLVIKPLKVKPELPANFEESTWSKLRDCIIAV
HCKRPVSNSLEELYTAVQDMCMHKMADKLYTRLQKECDAHIAAHVGSLGDCLGLDAVPYL
DRVDSVWQDHCSQMLLTRQIFLYLDRTHVLQLSSSATPVKSIFDMGLALFRTHLAERPQI
KERTVEGLLELVQRERCGEGVNRALLQRLLRMLSSLGIYTDAFHEPFMKASGQFYRSEGE
RLVAELDVPAYLKHCETRLGEEFERCSEYLDASSRRPLIAAVEGALVARHTGPLLDRGLG
PLLDGHRVGDLGRLYGLLGRVGASEALRAAFREYVRSTGLALVKDEEKDKEMVERLLDLK
SRLDEVVAGAFGRSEAFAATLKESFEYFINQRANKPAELIAKFIDARLRAGGRGAAAGAA
GAGGSGAGTGGSEEELEAALDRALILFRYIQGKDVFEAFYKKDLAKRLLLGRSASVDAEK
AMIAKLKVECGSQFTAKLEGMFKDVELSDDVMAAFRGAPAAAGLPSGVDVAVSVLTSGYW
PTYPVTEVKLPEVLDRAGAVFRDFYLSKYSGRRLVWQHSLGSCMLRASFPKGMKELSVST
FQAAVLMLFNDTDTLSYKDVLAGTGLEEKELKRTLQSLACGKVRVLTKEPKGRDVNDDDS
FSFNTGFTEKLFRIKINSIQMKETEEENKKTNEQVLQDRQYQIDAALVRIMKTRKTLSHK
LLVAEALQQLKFPLKAADLKKRIESLIDREYLARDANDANVYNYLA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtcagcagtaagaggcaagggcggggccccgcttgggggtctcgcccctgtcgcagga
agcgcgaacacgcagcaggcgaagaagctggtcatcaagccgcttaaagtcaagcccgag
ctccccgccaacttcgaggagtcgacatggagcaagctgcgcgattgcatcattgcggtg
cattgcaaacgccccgtgtccaacagcctggaggagctgtacacggcggttcaggatatg
tgcatgcataagatggcggataagctttacacccgcctgcaaaaggagtgtgatgcgcac
atcgcggcgcacgtgggctcgctgggcgactgcctgggtctggacgcggtgccgtacctg
gaccgtgtggacagcgtgtggcaggaccactgcagccagatgctgctgacgcggcagatc
ttcctgtacctggaccgcacgcacgtgctgcagctcagcagcagcgccacgcccgtcaag
tccatattcgacatggggctggcgctgttccgcacacacctggcggagcggccgcagatc
aaggagcgcacagtagaggggctgctggagctggtgcagcgggagcgctgcggcgaaggc
gtgaaccgggccctgctgcagcggctgctgcgcatgctgtcctcactgggcatctacacg
gacgccttccatgagccattcatgaaggcgagcgggcagttctaccggtccgagggcgag
cggctagtggcggagctggacgtgccggcctacctcaaacactgcgagacgcggctgggc
gaggagtttgagcgctgcagcgagtacctggatgcctcctcgcgccgcccgctcatcgcc
gcggtggagggcgcgctggtggcgcggcacaccggcccgctgctggaccgggggctgggg
ccgctgctggacgggcaccgtgtgggtgacctgggccgcctgtatgggctgctggggcgg
gtaggcgcgagcgaggcgctgcgggcggcgttccgcgagtacgtgcgctccaccggcctg
gcgctggtcaaggacgaggagaaggacaaggagatggtggagcggctgctggacctcaag
tcgcggctggacgaggtggtggcgggcgccttcggccgcagcgaggccttcgccgccacc
ctcaaagaaagctttgagtacttcatcaaccagcgcgccaacaagcccgcggagctcatc
gccaagttcattgacgcgcggttgcgggcgggtgggcgcggggcagcggcaggcgcggcg
ggtgccggcggcagcggggcgggcactggcggcagtgaggaggagctggaggcggcactg
gaccgggcactcatactgttcaggtacatccagggcaaggacgtgttcgaggccttttac
aagaaggacctggccaagcgcctgctgctggggcgcagcgccagtgtggacgccgagaag
gccatgattgcaaagctaaaggttgagtgcggcagccagttcactgccaagctggagggc
atgttcaaggacgtggagctcagcgacgacgtcatggcggccttcaggggggcgccggcg
gcggcggggctgccgtccggcgtggacgtggcagtgtctgtgctcaccagcggctactgg
cccacctaccccgtcacagaggtcaagctgccagaggtgctggaccgcgccggtgcggtg
ttccgcgacttctacctgtccaagtacagcgggcggcggctggtgtggcagcacagcctg
ggcagctgcatgctgagggccagcttccccaagggcatgaaggagctgtcagtcagcacc
ttccaggctgcggtgttgatgttgttcaatgacactgacacgctgtcgtacaaggacgtg
cttgcgggcaccgggctggaggagaaggagctcaagcgcacgctgcagagccttgcgtgc
ggcaaggtgcgcgtgctgaccaaggagcccaagggccgtgacgtgaacgacgacgacagc
ttctccttcaacacgggcttcacggagaagctgttccgcatcaagatcaactccatccag
atgaaggagacggaggaggagaacaagaagaccaacgagcaggtgctccaagaccggcag
taccagatcgatgcggcgctggtgcgcatcatgaagacgcgcaagacgctgagccacaag
ctgctggtggcggaggcgctgcagcagctcaagttcccgctcaaggcggcggacctcaag
aagcgcattgagagcctcattgaccgcgagtatctggcacgagacgccaacgatgcaaac
gtgtacaactatctcgcctga

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