Chlamydomonas reinhardtii: CHLRE_12g520550v5
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Entry
CHLRE_12g520550v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K18752
transportin-1
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHLRE_12g520550v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_12g520550v5
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_12g520550v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CHLRE_12g520550v5
Ribosome biogenesis [BR:
cre03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CHLRE_12g520550v5
Pre-60S particles
CHLRE_12g520550v5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_EZ
HEAT_GCN1
IBN_N
HEAT_2
TOR1L1_N
HEAT_EF3_N
TPR_DNAAF5
TPR_IMB1
Vac14_Fab1_bd
TPR_TTI1_N
Arm
TPR_IPO11
Motif
Other DBs
NCBI-GeneID:
5722588
NCBI-ProteinID:
XP_042918470
UniProt:
A0A2K3D415
LinkDB
All DBs
Position
12:4386558..4392565
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AA seq
959 aa
AA seq
DB search
MASWQPTQEGVLQLVQLLTLYQQPGTNQSQIFQQLEAYRAYPDFNNYLAFLFATGDQLTV
EVRQSAGLLLKNNLSKQYNDLQADFKAYIKSALLPLLGHATRELRHTAGTIASVIVGLGG
LEDWPDLAAAVPRCLQAEEPAVLDGALDTLYKVLEDHPRLMDTPVASAGGAAFSKLVVPP
LLRLMQSPVEDVRRSAVAGLNLMAPGMPAGLQDNVDSFLQGLFALANDTSNRVRKEVVVG
LVTATSFLPDRVAPFMGQLVEYMLASNEHADPAVALAAAEFWTAYLELQLDPGLLRPALP
RLIPVLLKNMVFDEYDDEVAEAEAAEASGGVQKEDRDQDLKPFHHRAREHGAEATEEGAE
GAGADGDEDDDDEVFSAWNLRKCSAEALDVLSNNYGDDLLPVLLPIVQQRLQDSNWRSRE
SAILALGAISHGCHQGLQPYLEGMVTMLLPALQDARPMVRIITCWTLGRYSHWLFVGVLE
RGAAGRPLLDQVVAGILGRMADNNKFVQAAAVSALAVLVETASEGHDAADKLLEPYLKAI
LEALAMALTRYTRRGVVVTYDALSCTARVLGPRMADPALATIVLPPLVGKFTSSPLTDKD
LLATMECLANVTPHTGRTVEPYAKPLYDRALALAGVYMAVGQHSRQAAGTPSALTGGPDA
ATTAAAATAGAAYGGAAAALANGAAAGVEYDVNFVVLSLDVVSGMAQGLGASIESLVGTS
PLVQMLTVCCWDTSADVRQSAFALVGDLASACVAHLLPALDALVGCALALLELPRITEHA
LASANNACWSLGELIIKVDPERIVPHAEAIALRMTSILSFSGPGRMPPSILENASITLGR
TAWRCSEQLAPHLAHFVTPWCMQLRNIRDGTEKEHAFLGLCRLVRMNPEAALPAFPMLCA
AFASWRRVGCEGLRNEMAQILQLYKANLAAAGPGRWEQVVSGVAEPVRGKLQQMFGAVL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtggcagccgacccaggagggcgtcttacagctagtgcagctgttgacgctt
taccagcagccgggcacaaaccaaagccagatattccaacagcttgaggcgtaccgggct
tatccggacttcaacaactacttggcgttcctattcgcgactggcgaccagctcacggtc
gaggtacggcaaagtgctggcctgctgctgaagaacaacctcagcaagcagtacaatgat
ctccaagcggatttcaaagcgtacatcaagtcggcgctgctaccgctgctgggtcatgcc
acacgggagctgcggcacaccgcgggcacgatcgcctcggtgattgtgggcttgggcggg
ctggaggactggccggacctggcggcggcggtgccgcgctgcctgcaggcggaggagccc
gccgtgctagacggggcgctggacaccctgtacaaggttctggaggaccacccgcggctg
atggacaccccggtggcgagcgcgggcggcgcggcgttcagcaagctggtggtgccgccg
ctgctgcggctcatgcagtcgccggtggaggacgtgcggcgcagcgcggtggcggggctc
aacctcatggcaccgggcatgccggcgggactgcaggacaacgtggacagcttcttgcaa
gggctgtttgcgctggccaacgacacctccaaccgcgtgcgcaaggaggtggtggtgggg
ctggtgaccgccacctccttcctgccagaccgcgtggcgcccttcatggggcagctggtg
gagtacatgctcgcctccaacgagcacgccgaccccgcggtggcgctggcggccgccgag
ttctggaccgcctaccttgagctgcagctggacccggggctgctgcggccagcgctgccg
cgcctcatccccgtgctgctcaagaacatggtgtttgacgagtatgacgatgaggtggcg
gaggcggaggccgcggaggcctctggcggcgtgcaaaaggaggatcgcgaccaggacctt
aagcccttccatcaccgggccagggagcacggcgcagaggcaacggaggagggcgcggag
ggcgcaggggccgacggcgatgaggacgacgacgatgaagtattcagcgcctggaacctc
cgcaagtgcagtgcggaggcgctggacgtgctgtccaacaactacggcgacgatctgcta
ccagtgctcctgcccatcgtacagcagcgactgcaggactccaactggcgctcccgggaa
tcggccatcctggccctgggcgccatcagccacggctgccaccaggggctgcagccttac
ctggagggcatggtcaccatgctgctgcccgcgctgcaagacgcgcggcccatggtgcgc
atcatcacctgctggacgctcgggcgctacagccactggctgttcgtaggtgtgctagag
cgcggcgcggcggggcggccgctgctggaccaggtggtggcgggcatcctgggccgcatg
gccgacaacaacaagttcgtgcaggcggcggctgtgagcgcgctggcggtgctagtggag
acggccagcgagggccatgatgcggctgacaagctgctggagccctacctcaaggccatc
ttggaggcgctggcgatggcgctgacgcggtacacccgccgcggcgtagtggtcacctac
gatgcgctgtcctgcacagcgagggtgctggggccacgcatggccgaccccgcgctggcc
accatcgtgctgccgcctcttgtgggcaagttcacctcgtcgccgctcacagacaaggac
ttgctggcgacgatggagtgcctggccaacgtgacgccgcacacggggcggacggtggag
ccgtacgccaagccattgtacgaccgcgcgctcgcgcttgccggcgtctacatggccgtg
ggccagcactctcgacaagcagcgggcacgccaagcgctctgacaggcgggccagatgca
gccaccacggcggcggcggcgacggccggcgcggcgtacggcggtgcggcggcggccctt
gcaaacggagcggcggcgggcgtggagtacgacgtgaactttgtggtgctgtctctggat
gtggtcagcggcatggcgcaggggctcggcgccagcattgagtcgttggtgggcaccagc
ccgctggtgcagatgctcacggtctgctgctgggacacgtccgcggatgtgcggcagagc
gcgttcgcgctggtgggcgacctggcctccgcctgtgtagcgcacctgctgccggctctt
gacgcgctggtgggctgcgcgctggcgctgctggagctgccgcgcatcacggagcacgcg
ctggcgtccgccaacaacgcctgctggtcgttgggcgagctcatcatcaaggtggacccg
gagcgcatcgtgccgcacgcagaggccatcgcgctccgcatgacgtctatcctgtcgttc
tcgggaccgggccgcatgccgccgtccatcctggagaacgcctccatcacgctgggccgc
actgcctggcgctgctcggagcagctggccccgcacctggcgcacttcgtgacgccctgg
tgcatgcagctgcgcaacatccgggacggcaccgagaaggagcacgcgttcttggggctg
tgcaggctggtccgcatgaacccggaggcggcgctgccggccttcccaatgctgtgtgcg
gcgtttgcttcgtggcggcgggtggggtgtgaggggctgcgcaacgagatggcgcagatc
ctgcagctttacaaggccaacctggcggcggcagggcccgggcgctgggagcaggtggtg
tcgggcgtggcggagcccgtgcgcgggaaactgcagcagatgttcggggcggtgctgtaa
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