KEGG   Chlamydomonas reinhardtii: CHLRE_12g521200v5
Entry
CHLRE_12g521200v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K10754  replication factor C subunit 1
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03030  DNA replication
cre03410  Base excision repair
cre03420  Nucleotide excision repair
cre03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHLRE_12g521200v5
   03410 Base excision repair
    CHLRE_12g521200v5
   03420 Nucleotide excision repair
    CHLRE_12g521200v5
   03430 Mismatch repair
    CHLRE_12g521200v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cre03032]
    CHLRE_12g521200v5
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_12g521200v5
DNA replication proteins [BR:cre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CHLRE_12g521200v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CHLRE_12g521200v5
SSDB
Motif
Pfam: RFC1 BRCT AAA PTCB-BRCT Rad17 YL1 RuvB_N AAA_22 nSTAND3 RNA_helicase BRCT_2 AAA_33 AAA_28 AAA_16 Zeta_toxin
Other DBs
NCBI-GeneID: 5722576
NCBI-ProteinID: XP_001696917
UniProt: A0A2K3D450
LinkDB
Position
12:complement(4429992..4438667)
AA seq 1183 aa
MGKSEPADSKSPKKEEKQPAKPVGKDIRSFFSKPPGGASKPAAPAAKAEAGGGAVASAAV
KEPAATAVKAEPKAAAAPAAAKPAASASPPAAKPAAKKSRVIIDEDDDDDLVVVEKKKAS
TPKKQAGAAAAGTDSKKQPPGSGGKGSGGKKAASGKAPAAKKRRVVADDGDDDDVVEVSS
EGTDGDEEYQGGDESSDDDSDVVMEEEDDDDDSDVVMEDSEDEEAGGKAGKAKAKATPKA
AAAKPAAAAAKQPAKGKGKKVAGPAMTITPKGSEPEKKKPLAGTKHARSPAKDEQGSGGK
ATGGPKKAPARAASPTAAARRKSAATKAVFSTNPGSASAIAAVDAAVAQLPPETEVDFSL
LPEGQDGAAYASAPPPNQGNKEAPRGHPDCLTGKTFVISGVLDSLGREEATDYIKRHGGR
VTGAVSGKTSFLVVGHHTGRSKYRKAREHGTKVIDEDGLFSLIRASEPFIPAENAAAPPA
SAPAAAAPASQPASQPPSQQPASQPAAAQRPGAGAAAGPSSARPAGVTRQPAAAGDAGQY
QLWVDKYKPRNSAELVGNNTLVDNLKSWLMNWEQVHLRGGAAPTAKGGGSKPKDLSKKAA
LLSGPPGIGKTSAAHIMAREAGFEVVEMNASDTRNKAGKTSEGIAGKQSNIIKEMVTSTT
LPPGLFGGGCGGGLGSTAPRRQLLIMDEVDGMSGGDRGGVQDLIDTIKRSKIPIICICND
KYNQKLKSLRNHCLELEFRKPTVLQISKRMSEIAAKEGLAINQATMDALVTGAGGDLRLI
LGQLQMVRLRSVAVSFDDVRSGRLGSSKDMDRSPFECSRQLLEPSSGQLSLGDRLELVFA
DSDLVPLLLQENYVNHKPAITTDAASRLRALAKAADAFSAGDVLNTSIRRHQNWGLMPAM
AVVGCVLPCAYMRGGREVFGLFPGEMNFPRFSAWFGNNSTSGKQRRLLGELSTSMTASGL
VAAGRSGVRLEYASALRHLLARPLQQQQEAAVPRVVAEMHEYCIDKEQFDYILDVTSFKS
KAPWAADLFKDVPPKVKAAFTRTLNSTAPAARCNAQVEEVKLGRGKGKAKGGRKAAAEEE
DEEEGGEGGEGGEEEAKPAVKQESGEGGEEEEEDDDDVDARTLARRLAKGGLEVHLQDDG
KAGKGKKGGTAGGGGGRGKAGAAAKPAGGRGGGRGGAKAAGKK
NT seq 3552 nt   +upstreamnt  +downstreamnt
atgggcaagtcagagcccgcggacagcaagtctcccaagaaggaggagaagcagccagcg
aagccagtgggcaaggacattcgcagcttcttcagcaaaccccctggcggagccagcaag
ccggctgccccagccgcgaaggctgaggccggtggcggtgccgtcgcgtcggcggccgtg
aaggagccagcggcgacagcagtgaaggcggagccgaaggctgcggcagcgccggctgcg
gccaagcctgcggcctcggcctccccgccggccgccaagcccgcagcaaagaagagcagg
gtcatcatcgacgaggatgatgacgatgacctggtggtggtggagaagaagaaggcctct
actccgaagaagcaggcgggcgccgccgctgcgggcacggactcgaagaagcagccgccg
ggcagcggcggcaaaggctccgggggcaagaaggctgctagcggcaaggcgcctgccgcc
aagaagcggcgtgtggtggcggatgacggcgacgacgatgacgtggtggaggtgtcgagt
gagggcacggacggagacgaggagtaccagggcggcgacgagagcagcgacgacgacagt
gacgtggtgatggaggaggaggacgacgacgatgacagcgatgtggtgatggaggacagc
gaggacgaggaggcggggggcaaggccggcaaggccaaggccaaggccacgccgaaggcc
gctgcggccaagcccgcggctgcggccgccaagcagccggccaagggcaagggcaaaaag
gtcgcgggccccgccatgaccatcacacccaagggctcggagccggagaagaagaagccg
ctggcgggcaccaagcacgcgcgctcgccggccaaggacgagcagggctctggtggcaag
gctacagggggcccaaagaaggcgcctgcccgagcagcgagcccgaccgcggccgcccgg
cgcaagtccgctgccaccaaggccgtcttctccaccaaccccggctccgcgtctgccatt
gctgcggtggacgcagcggtggcacagctgccgccggagactgaggtggacttcagcctg
ctgcctgagggccaggacggcgccgcctacgccagtgcgccgccgcccaaccagggcaac
aaggaggcgccgcgcggccaccctgactgcctgaccggcaagacctttgtgatcagcggc
gtgctggacagcctgggccgcgaggaagccaccgactacatcaagcgccacggcggccgc
gtcacgggggcggtgtcgggcaagacgagcttcctggtggtgggacaccacacgggcagg
agcaagtaccggaaggcccgcgagcacggcaccaaggtcattgacgaggacggcctgttc
tcactcatccgcgcctccgagcctttcatcccggcagaaaacgccgcagcaccgcccgca
tccgcacccgccgctgccgcgcccgcctcgcagcccgcctcacagcctccgtctcagcaa
ccggccagccagcctgccgccgcgcagcggcccggcgccggcgcagctgccggcccctcc
tccgcccggccagccggcgtcactcggcagcctgccgccgccggggacgccggccagtac
cagctgtgggtggacaagtacaagccgcgcaacagcgcagagctggtgggcaacaacaca
ctggtcgacaacctcaagtcatggctgatgaattgggagcaggttcacctccgcggcggc
gccgcccccacggccaagggcggcggcagcaagcctaaggacctgtccaagaaggcggcg
ctgctgagcggcccgcccggcatcggcaagaccagcgccgcacacatcatggcgcgggag
gcgggcttcgaggtggtggaaatgaacgccagcgacacgcgcaacaaggccggcaagacc
agcgagggcatcgccggcaagcagtccaacatcatcaaggagatggtcaccagcaccaca
ctgccgcccgggctgttcggaggcggctgcggaggcggcttgggcagcacggcgccgcgg
cggcagcttctgatcatggacgaggtggacggcatgtcgggcggcgaccgcggcggcgtc
caggacctgatcgacaccatcaagcgcagcaagatccccatcatctgcatctgcaacgac
aagtacaaccagaagctcaagagcctgcgcaaccactgcctggagctggagttccgcaag
cccacggtgctgcagatctccaagcgcatgagcgagatcgcggccaaggagggcctggcc
atcaaccaggccaccatggatgcacttgtgacgggcgcgggcggcgacctgcgcctcatc
ctggggcagctgcagatggtgcgcctgcgcagtgtggcggtcagcttcgacgacgtgagg
agcggccgcctgggctccagcaaggacatggaccgctcgcccttcgagtgcagccggcag
ctgctggagccgtccagcggccagctgtcgctgggcgaccggctggagctggtgttcgcg
gacagcgacctggtgccgctgctgctgcaggagaactacgtcaaccacaagcccgccatc
acaacggacgccgcctcccgcctgcgcgcgctggccaaggccgccgacgccttctccgcc
ggcgacgtgctcaacaccagcatccgccgccaccagaactggggcctcatgcccgccatg
gccgtggtgggctgcgtgctgccctgcgcctacatgcgcggcggccgcgaagtgtttggg
ctgttcccgggagagatgaacttcccgcgcttctccgcctggttcggcaacaactccacc
agcggcaagcagcggcggctgctgggcgagctgtccaccagcatgacggcctcggggctg
gtggcggcggggcgcagcggcgtgcggttggagtacgcctcggcgctgaggcacctgctg
gcgcggccgctccagcagcagcaggaggcggcggtgccgagggtggtggcggagatgcac
gagtactgcatagacaaggagcagttcgactacatcctggacgtgacctccttcaagagc
aaggcgccctgggcggcggatctgttcaaggacgtgccgcccaaggtcaaggccgcattc
acacggacgctcaactccacggcgccggcggcgcgctgcaatgcgcaggtggaggaggtg
aagctggggcgcggcaagggcaaggccaagggcggccgcaaggcggctgcggaggaggag
gacgaggaggagggcggcgagggtggcgagggcggcgaggaggaggcgaagcccgctgtc
aagcaggagtcgggcgagggcggggaggaggaggaagaggacgacgacgacgtggacgca
cgcaccctagcgcggcggctggccaagggcgggctggaggtgcacctgcaggacgacggc
aaggctggcaaagggaaaaagggcgggacggcgggcggtggtggaggccgcgggaaagcg
ggcgccgcggcaaagccggcgggtgggcgcggcggaggtcggggcggcgccaaggcggcc
gggaagaagtga

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