Chlamydomonas reinhardtii: CHLRE_12g525050v5
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Entry
CHLRE_12g525050v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K22804
structural maintenance of chromosomes protein 6
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_12g525050v5
DNA repair and recombination proteins [BR:
cre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
CHLRE_12g525050v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
PTM_DIR17_Tudor
AAA_29
SMC_hinge
Bacillus_HBL
MukB
AAA_21
Motif
Other DBs
NCBI-GeneID:
5722508
NCBI-ProteinID:
XP_042918539
UniProt:
A0A2K3D4C5
LinkDB
All DBs
Position
12:complement(4852476..4861360)
Genome browser
AA seq
1346 aa
AA seq
DB search
MEPEPKTVREAKAYVGRSVLKRFKIDDRGRYQFFKGTCKEIVKFEGEICYHLEYEDGDTE
DILWQDFYGVLQPLPENQQAPPSLGPSRRSAGLSDATNRLSVPLGNTGRMSTDKPTSTKR
QRPIKAEPAASLQPSDDGDMPLEDLPPPPRSGQAVRGNKRKSAGGAAAAAQQAAGNEEGQ
EQQHEEGEDHVPKATEADRPTKRRATDDNAPAAVGGAAGDATAANNASARPRNQGFVVRE
HGLAGHVDRIRVENFMCHSNFELQLGPHVTLVSGTNGSGKSAVIQAMQVCLGATARETSR
ARSFAAFVKEGCHEARVYVTLWNVGEDAFLPDLFGERITIERSIKAAGGTDVKLLDERGK
RVTVGKPRDTLFAMLEHFCIDVTNPLTIITQDKARQFLSSDTGRDSGRDKYDIFMEGTLL
QRQLDENNLAGVKLQESSHRLAESAAYIKESEDAQASLQAKLKRLTEADKMLEHRDLLEK
AVVWAHVREHEAAVARCSEAAEVHGPRQVELYTRLLEQLAANRDELQQRLKEHDEVVARN
KELLNSHKANVENLLKEVRRAADNRSQKTRDRTAAKVHLQGLQKSQRDVNTKLAEASTVD
VKVAEARKLLEEHQQKITAKKVEEERAKALVDEAMKLFEELKAQEQRMADEEMQGRNRIQ
HSEDMLRASLQGLKGIEAAKGNRLGAFGAVKLCELITANMRSFQRPPIGPLGAYISVTDG
RWAVAAQTILGVCLRDFIVSCGADAALLNRLMAKAGYARASIITVNYGDPPHPIPPATHP
GGGYPALLDVLVIKDELARVPLLNYLVDRFSVERVALAETESSGREVVYQNAAGPHVTLA
VDQGGTTFHRKGGLTWIKRDHFVNARNCLLAADMGDMAANLRADLEAEEAQLGALREELA
ALVAQRAAKQAEMAAATQRWNQAKMLKTRLATECRRLEQNKPVVPEVEDEEHQVVMTQLQ
SIHQEIVDWQRELEVAQDALDIAEKEVNAANERVKEAERSFTELLHDSEVKANAKAEVEA
RLKDLEAMRNQAKAERAGVVSRLAALKAAMDKARERGQTAVAGAEQVCSREEGQAALARA
RELIEERMRDKMAKSKEWQGQADLTAEVLRQDIDKKMNPRDLAGRLSSVNKSIEKEEHKA
GADKDQLRIMLADLGRALSLKRVLHARVSKTTSMLGASMERRRQLYLKMLGLVEKYVNAK
FSSYMQRRKHLGSVKWDHERRQLTLIVQPKAKDTGDKATNVEDLKVLSGGERSYTTVAFL
LAVGANTETPFRVMDEYDVFMDPVNRRMATITLLECARDHADFQYIILTPQDLSTVHAAR
QTLIEKTKMDMPPAFIKTVLIKPARG
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggagccggaaccaaagactgtgcgagaagcgaaggcctacgtgggcagaagcgtgctc
aagcgcttcaaaattgacgataggggtcgctatcagttcttcaaggggacgtgcaaggag
atagtcaagttcgagggtgaaatctgttatcaccttgagtacgaggacggggatacggag
gacatcctgtggcaggacttttacggagtgctccagccgctgcccgagaaccagcaggca
ccgccttcgctgggcccgagtcgccgctccgccggcttgagcgacgccacgaaccggctg
tccgtgccgctcggcaacaccggtaggatgtccacagacaagccgacgagcaccaaacgg
cagcggcccatcaaagcagagccggctgccagcctgcaacccagtgatgacggcgatatg
ccgctagaggatctgccgccgccaccccgcagtgggcaggccgtgcgcggcaacaagcgc
aagagcgcgggcggtgccgcggcagcggcccagcaggctgcaggcaatgaggaagggcag
gagcagcagcatgaggagggcgaggatcatgttcccaaggctacagaggcggaccggccg
accaagcgcagggccacggatgacaatgcgcctgctgctgtgggtggagcagctggggat
gcaaccgcggcgaacaacgcttctgcgcggccgcgcaaccagggcttcgtggtccgcgag
cacggtctggcgggtcacgtggatcgcatccgggtggagaacttcatgtgccactccaac
ttcgagctgcagctggggccccacgtgacgctggtgagcggcacgaacggcagtggcaag
agcgcggtgatccaggcgatgcaggtgtgcctgggcgctacggcgcgcgagaccagccgc
gcgcggtctttcgcggcgttcgtcaaggagggctgccacgaggcgcgtgtgtacgtgacg
ctgtggaacgtgggcgaggatgccttcctgccggacctcttcggcgagcgtatcacgatc
gagcgcagcatcaaggcggcgggcggaaccgacgtcaagctgctggacgagcgaggcaag
cgggtgacagtgggcaagccgcgcgacacgctgttcgcgatgctggagcatttctgcatc
gacgtcaccaacccgctcacgatcatcacgcaggacaaggcgcgccagtttctctccagc
gacacgggccgggactcgggccgggacaagtacgacatcttcatggagggcacactgctg
cagcgccagctggatgagaacaacctggcgggcgtgaagcttcaagagtccagccaccgc
ctggcggagagcgcggcgtatattaaggaatcggaggacgcacaggccagcctgcaggcc
aagctgaagcgcctcacagaagctgacaagatgctggagcatcgggacctgctggagaag
gcggtggtgtgggcgcatgtgcgcgagcacgaggcggcggtggcgcgctgcagcgaggcg
gccgaggtgcacggcccgcggcaggtggagctctacacgcggctgctggagcagctggcg
gccaacagggacgagctgcagcagcggctcaaagaacacgatgaggtcgtggcgcggaac
aaagagctgctgaacagccacaaagccaacgtcgagaacctgctcaaggaggtccgcagg
gccgccgacaaccgctcgcaaaagacacgcgaccgcacagctgccaaggtccaccttcag
gggctgcaaaaaagccagcgggacgtgaatacaaagctggcggaagcgagcaccgtcgat
gtgaaggtggcagaggcgcggaagctgctcgaggagcaccagcagaagatcacggccaag
aaggtggaggaggagagggccaaggcgctggtggacgaggctatgaagctgttcgaggag
ctgaaggcgcaggagcagcgcatggcggatgaggaaatgcaaggccggaaccgcatccag
cactcagaggacatgctgcgcgcgtcgctgcaggggctgaaagggattgaggccgccaag
ggcaaccggctgggcgcattcggcgcggtgaagctgtgcgagctcatcaccgctaacatg
cgcagcttccagcgcccgcccattgggccgctcggcgcctacatcagtgtgacggatggc
aggtgggcggtggccgcgcagaccatcctgggcgtctgcctgagggacttcatcgtcagc
tgcggcgccgacgcagcgctgctgaaccgtctgatggcgaaagccggctatgcccgcgcg
agcatcatcaccgtcaactacggcgacccaccgcaccccatcccgcccgctacgcatccc
ggtggcggctacccggcgctgctggacgtgctggtgatcaaggacgagctggcacgcgtg
ccgctgctgaactacctggttgacaggttctctgtggagcgtgtggcgctggcggagacg
gagtccagtggccgcgaggttgtgtaccagaacgcggcgggcccccatgtcaccctggcg
gttgaccagggcggcacgaccttccaccgcaagggcggcctgacctggatcaagcgcgac
catttcgtgaacgcgcgcaactgcttgctggcggcggacatgggcgatatggccgccaac
ctacgcgccgacctggaggcagaggaggcgcagctgggcgcgctgcgggaggagctggcg
gcgctggtggcgcagcgggcggccaagcaggccgagatggcggcggctacgcagcggtgg
aaccaggccaagatgctcaagacgcggctcgcgaccgagtgccggcggctggagcaaaac
aagcccgtggtgccggaggtggaagacgaggagcaccaggtggtgatgacgcagctgcag
tccatccaccaggagatcgtggactggcagcgcgagctggaggtggcgcaggacgcatta
gatatcgctgagaaggaggtaaacgccgcgaatgagcgcgtgaaagaggcggagcgctcc
tttacggagctgctgcatgactcggaagtcaaggccaacgccaaggccgaggtggaggcg
aggctgaaggacctggaggccatgcggaaccaggccaaggcggagcgcgcgggcgtggta
tcgcggctagcggcgctgaaggcggcgatggacaaggcgcgcgagcgggggcagacggcc
gtggctggcgctgagcaggtgtgcagccgtgaggagggccaggcggcgctggcacgggcc
cgcgagctgattgaggagcgcatgcgtgacaagatggccaagtctaaggagtggcagggg
caggcggacctgacggctgaggtgctgcgacaggacatcgacaagaagatgaacccgcgg
gacctggcggggcgactgtcgagcgtcaacaaatctattgagaaggaggagcacaaggcg
ggcgcggacaaggaccagctgcgcatcatgctggcggacctgggccgagcgctgtcgctg
aagcgtgtgctgcacgcgcgcgtgtccaagactacctccatgctgggcgcgagcatggag
cggcggcggcagctgtacctcaagatgctggggcttgtggagaagtacgtgaacgccaag
ttcagctcctacatgcagcgccgcaagcacctgggctctgtgaagtgggaccatgagcgc
cggcagctgacgctgattgtccagcccaaggctaaggacaccggagacaaggccaccaat
gtcgaggacctcaaggtcctgtcaggcggcgagcgctcctacaccaccgtggcgttcctg
ctggctgtgggcgccaacaccgaaacgcccttccgcgtcatggacgagtacgatgtgttt
atggaccctgtgaaccgccgcatggccaccatcacgctgctcgagtgtgcgcgcgaccac
gccgatttccagtacatcatcctcacgccgcaagacctgtcgactgtgcacgcagcgcgc
cagacgctgatcgagaagaccaagatggacatgccgcccgcgttcatcaaaacggtgctc
atcaagccggcgcgcggttaa
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