Chlamydomonas reinhardtii: CHLRE_12g526750v5
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Entry
CHLRE_12g526750v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12876
RNA-binding protein 8A
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03013
Nucleocytoplasmic transport
cre03015
mRNA surveillance pathway
cre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLRE_12g526750v5
09122 Translation
03013 Nucleocytoplasmic transport
CHLRE_12g526750v5
03015 mRNA surveillance pathway
CHLRE_12g526750v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_12g526750v5
03041 Spliceosome [BR:
cre03041
]
CHLRE_12g526750v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CHLRE_12g526750v5
Spliceosome [BR:
cre03041
]
Complex C
Other components
EJC/TREX
CHLRE_12g526750v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
5722477
NCBI-ProteinID:
XP_001696992
UniProt:
A8J5G1
LinkDB
All DBs
Position
12:5097046..5098429
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AA seq
144 aa
AA seq
DB search
MADDEMAHDERDERMDAGDMKRKGRGHRDATEWADRYGGARFKELDPNAKPGPTASVEGW
VVFITGINEEAQEEDIHEAFAEFGEVKNIYMNLDRQTGFVKGYALVEYKNHKEAQTAINE
MNGKELLTQTIQVDWAFKKPQRRR
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacgagatggcccacgacgagcgcgacgagcgcatggacgccggcgatatg
aagcgaaagggacgtgggcatcgcgatgctaccgagtgggcggaccgctacggaggcgcc
cgcttcaaggagcttgacccgaacgccaagccggggccgacggcttccgtggagggctgg
gtcgttttcattaccggcatcaatgaggaggcccaagaggaggacatccacgaggcattc
gcggagttcggcgaggtcaagaacatttacatgaacctggaccgccagaccggctttgtc
aagggctatgccctcgtcgagtataagaaccacaaagaggcgcagacggctatcaacgag
atgaacgggaaagagctcttgacacagacgatccaggtggactgggcgttcaagaagccc
cagcggcggcggtaa
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