Chlamydomonas reinhardtii: CHLRE_12g527300v5
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Entry
CHLRE_12g527300v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03030
DNA replication
cre03410
Base excision repair
cre03420
Nucleotide excision repair
cre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHLRE_12g527300v5
03410 Base excision repair
CHLRE_12g527300v5
03420 Nucleotide excision repair
CHLRE_12g527300v5
03430 Mismatch repair
CHLRE_12g527300v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cre03032
]
CHLRE_12g527300v5
03036 Chromosome and associated proteins [BR:
cre03036
]
CHLRE_12g527300v5
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_12g527300v5
DNA replication proteins [BR:
cre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CHLRE_12g527300v5
DNA Replication Termination Factors
ELG1-RFC complex
CHLRE_12g527300v5
Chromosome and associated proteins [BR:
cre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CHLRE_12g527300v5
DNA repair and recombination proteins [BR:
cre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CHLRE_12g527300v5
Check point factors
HRAD17(Rad24)-RFC complex
CHLRE_12g527300v5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_16
AAA_5
AAA_lid_RFC1
ResIII
AAA_11
AAA_22
AAA_14
AAA_3
RuvB_N
DUF815
DEAD
AAA_24
bpMoxR
RCF1-5-like_lid
nSTAND_NTPase5
AAA_30
ABC_tran
AAA_7
AAA_19
DUF4359
nSTAND3
AAA_assoc_2
TniB
IstB_IS21
Mg_chelatase
Viral_helicase1
AAA_25
AAA_18
ATPase_2
AAA_28
Motif
Other DBs
NCBI-GeneID:
5722466
NCBI-ProteinID:
XP_001696875
UniProt:
A8J5E0
LinkDB
All DBs
Position
12:complement(5159810..5163815)
Genome browser
AA seq
356 aa
AA seq
DB search
MALAAQDMSAMAKMDEVMAVPSNRLKTDGTVDGRDAPWVEKYRPKKLDDVAAHKEIIDTI
KRLTVENRLPHLLLYGPPGTGKTSTILAVARQIYGNSLANMTLELNSSDERGIGVVRQEI
QDFASTRSVFSNKFKLIILDECDAMTQDAQAALRRVIEKYTRNARFCLICNYVSKIIPAL
QSRCTKFRFAPLSPQFVRERLQYVADIEKMKLGPGGLDAVVQLGSGDMRRSLNILQSCHM
AFDTVDQSAVYTCTGNPLPADIERVLTWLLNDRVAEVFANILKLQVDKGIALVDIVRELH
PFVMALSIPVPAKVALVERLADVEHRLAFSTSEKLQLGALVAAFVRARETIAAAAK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggctcttgcagctcaggacatgtcggccatggccaagatggacgaggtaatggccgtg
ccgagcaaccggctaaagacagacggcactgtggacgggcgggacgcaccctgggtggag
aagtaccgaccaaagaagctcgacgacgtggccgcgcacaaggagattatcgacacgatc
aagcgtctgacggtggagaaccggctgccgcatctgctgctgtacgggccgcccggcacc
ggcaagacctccaccatcctggcggtagcccgccagatctacggcaacagcctggccaac
atgacgctggagctcaactcctcggacgagcgcggcatcggcgtggtacgccaggagatc
caggactttgcgtccacgcgcagcgtgttcagcaacaagttcaagctaattatcctggac
gagtgtgacgccatgacgcaggacgcacaggcggcgctgcggcgagtgattgagaagtac
acccgtaacgcacgcttctgcctcatctgcaactacgtgtcaaagatcatccccgcgctg
cagtcccgctgcaccaagttcaggttcgcgcctctgagcccgcaattcgtgcgcgagcgg
ttgcagtacgtggcagacatcgagaagatgaagctgggcccgggcggcctggatgcggtg
gtgcagctgggcagtggcgacatgcgccgctcgctcaacatcctgcagtcctgccacatg
gcgtttgacacggtggaccagtcggcggtgtacacgtgcaccggcaaccccctgcccgcc
gacatcgagcgggtgctcacgtggctgctcaacgaccgcgtggcggaggtgtttgccaac
atcctgaagctgcaggtggacaagggcattgcactggtggacattgtgcgcgagctgcac
ccgtttgtgatggctctaagcatcccggtgcctgccaaggtggcgctggtggagcggctg
gcggacgtggagcaccgcctggccttcagcaccagcgagaagctgcagctgggggcgctg
gtggcggccttcgtgcgggcgagggagaccatcgcggcggcagccaagtga
DBGET
integrated database retrieval system