KEGG   Chlamydomonas reinhardtii: CHLRE_12g527300v5
Entry
CHLRE_12g527300v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K10756  replication factor C subunit 3/5
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03030  DNA replication
cre03410  Base excision repair
cre03420  Nucleotide excision repair
cre03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHLRE_12g527300v5
   03410 Base excision repair
    CHLRE_12g527300v5
   03420 Nucleotide excision repair
    CHLRE_12g527300v5
   03430 Mismatch repair
    CHLRE_12g527300v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cre03032]
    CHLRE_12g527300v5
   03036 Chromosome and associated proteins [BR:cre03036]
    CHLRE_12g527300v5
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_12g527300v5
DNA replication proteins [BR:cre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CHLRE_12g527300v5
  DNA Replication Termination Factors
   ELG1-RFC complex
    CHLRE_12g527300v5
Chromosome and associated proteins [BR:cre03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CHLRE_12g527300v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CHLRE_12g527300v5
  Check point factors
   HRAD17(Rad24)-RFC complex
    CHLRE_12g527300v5
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_16 AAA_5 AAA_lid_RFC1 ResIII AAA_11 AAA_22 AAA_14 AAA_3 RuvB_N DUF815 DEAD AAA_24 bpMoxR RCF1-5-like_lid nSTAND_NTPase5 AAA_30 ABC_tran AAA_7 AAA_19 DUF4359 nSTAND3 AAA_assoc_2 TniB IstB_IS21 Mg_chelatase Viral_helicase1 AAA_25 AAA_18 ATPase_2 AAA_28
Other DBs
NCBI-GeneID: 5722466
NCBI-ProteinID: XP_001696875
UniProt: A8J5E0
LinkDB
Position
12:complement(5159810..5163815)
AA seq 356 aa
MALAAQDMSAMAKMDEVMAVPSNRLKTDGTVDGRDAPWVEKYRPKKLDDVAAHKEIIDTI
KRLTVENRLPHLLLYGPPGTGKTSTILAVARQIYGNSLANMTLELNSSDERGIGVVRQEI
QDFASTRSVFSNKFKLIILDECDAMTQDAQAALRRVIEKYTRNARFCLICNYVSKIIPAL
QSRCTKFRFAPLSPQFVRERLQYVADIEKMKLGPGGLDAVVQLGSGDMRRSLNILQSCHM
AFDTVDQSAVYTCTGNPLPADIERVLTWLLNDRVAEVFANILKLQVDKGIALVDIVRELH
PFVMALSIPVPAKVALVERLADVEHRLAFSTSEKLQLGALVAAFVRARETIAAAAK
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggctcttgcagctcaggacatgtcggccatggccaagatggacgaggtaatggccgtg
ccgagcaaccggctaaagacagacggcactgtggacgggcgggacgcaccctgggtggag
aagtaccgaccaaagaagctcgacgacgtggccgcgcacaaggagattatcgacacgatc
aagcgtctgacggtggagaaccggctgccgcatctgctgctgtacgggccgcccggcacc
ggcaagacctccaccatcctggcggtagcccgccagatctacggcaacagcctggccaac
atgacgctggagctcaactcctcggacgagcgcggcatcggcgtggtacgccaggagatc
caggactttgcgtccacgcgcagcgtgttcagcaacaagttcaagctaattatcctggac
gagtgtgacgccatgacgcaggacgcacaggcggcgctgcggcgagtgattgagaagtac
acccgtaacgcacgcttctgcctcatctgcaactacgtgtcaaagatcatccccgcgctg
cagtcccgctgcaccaagttcaggttcgcgcctctgagcccgcaattcgtgcgcgagcgg
ttgcagtacgtggcagacatcgagaagatgaagctgggcccgggcggcctggatgcggtg
gtgcagctgggcagtggcgacatgcgccgctcgctcaacatcctgcagtcctgccacatg
gcgtttgacacggtggaccagtcggcggtgtacacgtgcaccggcaaccccctgcccgcc
gacatcgagcgggtgctcacgtggctgctcaacgaccgcgtggcggaggtgtttgccaac
atcctgaagctgcaggtggacaagggcattgcactggtggacattgtgcgcgagctgcac
ccgtttgtgatggctctaagcatcccggtgcctgccaaggtggcgctggtggagcggctg
gcggacgtggagcaccgcctggccttcagcaccagcgagaagctgcagctgggggcgctg
gtggcggccttcgtgcgggcgagggagaccatcgcggcggcagccaagtga

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