Chlamydomonas reinhardtii: CHLRE_12g531400v5 Help Entry CHLRE_12g531400v5 CDS       T01039                                  Name (RefSeq) uncharacterized protein   KO K16478   nephrocystin-4 Organism cre  Chlamydomonas reinhardtii Brite KEGG Orthology (KO) [BR:cre00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:cre03037]     CHLRE_12g531400v5 Cilium and associated proteins [BR:cre03037]  Primary cilia and associated proteins   Nephronophthisis-related proteins    CHLRE_12g531400v5 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IQ Motif Other DBs NCBI-GeneID:  5718574 NCBI-ProteinID:  XP_001692920 UniProt:  A0A2K3D4W1 LinkDB All DBs Position 12:complement(5541713..5552358) Genome browser AA seq 1919 aa AA seqDB search MERFGLEEDIAEQLPGPARGGFAPQGSHFAGEASLGGGIPPARGPRPAGGLLVDRALTAQ LPPPGRGGVGGGGGGIGGFGLAAETDNYTTAEDADPVFDTQPRARRPGVPATGSKSRLGP GPLPPPGRELDAGPVGDNFRRQQPPPAMWPSDDLGPGPGPPEDAADRYARERAERLLSRQ TAARVAPQQVDRQINIMSAQPPKQMDMDRAALTIQRHYRGYRTRKNLPPEAQVFQRARGT QQYLGMGGAAPAAHATGFQGPTPDQNMMNRVRFQEGTYLEPRRGLPAVTVIDIDKMPKYG ILAAPLPRAERRAGTFIEYDREQQTFVKNRDLLREALEHKRGYLENRPALQWSEFTERQK HRYVPIVPDANRRALPETKGYRLRILRVSDLPINTTFDGRTFEFQLSVSLYDEGYGTFYG NTCYSLSDTYDRGRAQQRNAIDLDMSFDVYYHTTVSDPRCMAVVEVIMLERMLDGVVKGQ YSLGWALLPLFRVSQHPAPPGAPVTGSIQLDSNVGRPLSAPLMAGTPRYLLFRNVYNEEL RPPKVVPNASILFQAEVYPAMEPYIPLLPENFLVTYSDVVPGLRRFSAAGLLSTTTKTVI STLASPMLSPTYSIMLRRLQLALPSRIHDLLMGLDARHGMVTGYVPPPDSAAAMAPIYQA PSTGTLTYAIRVSVHNGRTFVGPAYELTDLTHLDVPGWKVLQVPTPHPVFDYVMADALVT IVVELMATPPQAPPPPGMAPLQFLVGYAAFVPFCEIREDGAAAHVAVGVHRYPLAPPDPA RPVLLRDQPPLNWRAMLGDMMTMEVPDPLVEFQLFETARTPILPPLKKVFAVIEAQREEE ALMGDLPLEVLLQQVPVPEEIFPPPEINEVDPSAREPPPQVLDFDGPPLERVPSMDMLPR NFSRHSMGAGAGFPPELQELTIAMQRQLELLTRAVDELKDERKSMRNSFIALADRPPPDD YGANAAAQVQRYYDAQRAKRASMQPTPEELQRFLDMEPTRNFGDTSAFSGAQAPDGKLPG TAPSRVLLQQLHDAGMIDALPADVQAILRRKGPPRGPSPVPIDLAIEARDPRVASDVVLQ FLAFRHHDHLNAPANLKSLYLTFQFYHFPPTTSDMAYLVPVRLEDDAVDSTCVLVPADPA RKGAGLVLKYVVDGAAEAVPSGQTPQDAGFEAARGFAQYLAVKTLHLDVWDGDSLLQVGT ASVDLQPLLRQGRDFAELLVEVPILDQAAVAPSLQGQTFMEAAYNQNTAQNEPKASIISK GSLVLRALNLGRESRNTDARLPEFDDAHNKPSKKRVRAKPAWEIPASPIAKELAGTAAAV PLPPGLQNEYLPDPLGGRTSVAFGGGGLMPPGEDLKLRILEQSSRKSARVQQYRRLASAV EDAVPGAQDLRESSAFTQREDHFRRVQKQLLVDVASARSRRKHEFILEQLRKSMVTRRIV KPAFGEVLVYEFEFQNPYSHEQTFELRINKPAEVTVLSRLEDYRALRAANARFLGVVSQP VGPLEQEIMSGNRIYLQAHERITLPFRLQSFEPPEAYKYSVQTPEAQANHSMTARARAAD MATRSPGAPHHRAAGGNNAGANVGNDGLPSGHVVAVELISTKDDVPVSVLELEIVPRPII IDRTFRYYQPERQLLRTNIKLRNLPGAAASYLANAPGALRNVTAACSNPDVILGVGSGAL ALGPDRDEVYVKYKIGAAPEVAHFYVLLYMDRLMARPVEVWQVFVHALRKVDMRAMIGQT SQASVVVRGAVSRRVASFTSHPDELLVSPDSFVLVGGALTELLLSFRPVAVGVKDIKVNI VDSETHELVYALLVSAEAQGPLITRTFEVELPVGTVANKKITYTNPYQHFRTFTLRSNQP WLVHFTPPRLQMPAGATRPVGLTFDARAATPGIVDALMFVNDDEDKTEECLKIRVRIYK NT seq 5760 nt NT seq  +upstreamnt  +downstreamnt atggagcgctttgggctggaagaggatattgcagagcaactgccggggccggcgcgagga ggatttgcgccgcagggctcacactttgctggtgaggcgagccttggtggtggcatcccg ccggcacggggccctcgccccgccggcgggttgctggttgatagggccctcacggcacag ctgcctccacctggccgcggaggcgtgggcggtggtggtggcggcattggcgggtttggg ctagcagcagagacggacaactacacgaccgcagaggacgcggacccagtctttgacact cagccacgcgcccggcgcccgggcgtgccggcaacgggcagcaagtcgcgcttggggcca ggcccgcttcctccgcctggccgggagcttgatgcagggcctgtcggcgataacttccgg cggcagcagccgccgccggccatgtggccctcagatgacctcgggcccggcccagggccg ccagaggatgccgctgaccgctatgcacgggagcgcgcggagaggttgctcagccgccag actgcagcccgtgttgcgccgcagcaggttgaccggcaaattaacatcatgagcgcccag ccacccaaacagatggacatggaccgcgcggcgctgaccatccagcgccattaccgcggc taccggacgcgcaagaacctgccgcccgaggcgcaggtgttccagcgggcacgggggacg cagcaatacctgggcatgggcggagctgcgccggcggcgcacgcaacgggcttccagggt cctacacccgatcagaatatgatgaatcgcgtacgcttccaggaggggacttacctggag ccgcgccgggggctgcctgcggtgacggtaatcgacatcgacaagatgcccaagtacggt atcctagcggcaccgctgccgcgtgcagagcgccgcgccggcaccttcatcgagtacgat cgggagcagcagacattcgtgaagaaccgtgacctgctgcgtgaggcgctggagcacaag cgcggctacctcgagaaccgacccgcgctgcagtggtccgagtttacggagcgccagaag caccgctatgtgccaatcgtgcccgacgccaaccgccgcgcgctgccagagaccaagggc taccgcctgcgcatcctgcgcgtcagcgacctacccatcaacaccaccttcgacggccgt acgtttgagttccagctcagcgtgtcgctgtacgacgagggctacggcaccttctacggc aacacctgctacagcttgtctgacacttacgaccgcggccgcgcacagcaacgcaacgcc atcgacctggacatgagctttgacgtgtactaccacacaacggtctcggacccgcgctgc atggccgtggtggaggtgatcatgctcgagcgcatgctggacggcgtggtgaaggggcag tactcgctgggctgggcactgctgccgctgttcagggtgtcgcagcaccccgcaccgccg ggcgcgccggtgacgggcagcatccagctggacagcaacgttgggcggccgctgtcggcg ccactgatggcgggcacgccgcgctacctgcttttccgcaacgtgtacaacgaggagctg cggccgcccaaggtggtgcccaacgcctctatcctgttccaggccgaggtgtaccccgcc atggagccctacatcccgctgctgcccgagaacttcctggtcacctacagcgacgtggtg cccggcttgcgccgcttctccgccgccggcttgctgtccaccaccaccaagacggtcatc tccacgctggcctcgccaatgctcagccccacctacagcatcatgctgcggcggctgcag ctggcgctgccctcgcgcatccacgacctgctcatggggctggacgcgcgccacggcatg gtgaccggctacgtgccgccacccgacagcgccgcggccatggcacctatctaccaggcg ccgtccactggcacactgacgtacgcgattcgagtgtcggtacacaacggccgcacattc gtcgggcccgcctacgagctgactgaccttacgcaccttgacgtgccggggtggaaggtg ctgcaggtgcccacgccgcaccccgtgttcgactacgtgatggcggacgcgctggtgacc attgtggtggagctcatggccacgccgccacaggctcccccgccgcctggcatggcgccg ctgcagttcctggtgggctacgcggcctttgtgccgttctgtgaaatccgcgaggatggc gccgccgcgcacgtggcggtgggggtgcaccgctacccgctggcgccgcctgacccggcg cgcccggtgctgctgcgcgaccagccgccgctcaactggcgcgccatgctgggtgacatg atgaccatggaggtgccggacccgctggtggagttccagctgtttgagacggcgcgcacg cccatcctgccgccgctcaagaaggtgttcgcggtgatcgaggcgcagcgcgaggaggag gcgcttatgggcgacctgccgctggaggtgctgctgcaacaggtgccagtgcccgaggag atcttcccgccgccggagatcaacgaggtggacccgtccgcgcgcgagccgccgccccag gtgctggacttcgacgggccgccgctggagcgtgtgccgtccatggacatgctgccgcgc aacttcagccgccacagcatgggtgcgggcgcgggcttcccgccagagctgcaggagctg accattgccatgcagcggcagctagagctgctcaccagggccgtggacgagctgaaggac gagcgcaagtccatgcgcaattcgttcattgctctggcagaccggccgccgccggacgac tacggcgccaacgcggcggcgcaggtgcagcggtactacgatgcgcagcgggccaagcgg gccagcatgcagcccacgcccgaggagttgcagcgcttcctggacatggagcccacccgc aacttcggcgacacctctgccttcagcggggcgcaggcgcctgacggcaagctgcccggc accgcgccgtcgcgcgtgctgctgcagcagctgcacgacgcgggcatgatcgacgctctg ccggcggatgtgcaggccatcctgcggcgcaagggcccgccgcgcggcccctcgcccgtg cccatcgacctggccatcgaggcgcgcgacccgcgtgtggccagcgacgtggtgctgcag ttcctggcgttccggcaccacgaccacctcaacgcgcccgccaacctcaagagcctgtac ctgaccttccagttttaccacttcccgcccaccaccagcgacatggcctacctggttccg gtgcgcctggaggacgacgccgtggacagcacctgcgtgctggtgccggccgacccggcg cgcaagggcgcgggcctggtgcttaagtacgtggtggacggcgcggcggaggcggtgccc agcggccagacgccgcaggacgccggcttcgaggcagcgcgcggcttcgcacagtacctg gccgtgaagacgctgcacctggatgtgtgggacggcgactcgctgctacaggtcggcact gcgtcagtcgacttgcagccgctgctgcggcagggccgcgacttcgctgagctgctggtg gaggtgcccatcctggaccaggcggcggtggcgccctcgctgcagggccagactttcatg gaggcggcgtacaaccagaacacagctcaaaacgagcccaaggcatcaatcatctccaag ggctcactagtgctgcgtgcgctcaacctgggccgcgagagccgcaacacggacgcacgg ctgcccgagttcgacgacgctcacaacaagccgtcgaagaagcgcgtgcgtgccaaaccc gcttgggagattcccgcctcgcccatcgccaaggagctggcgggaacggcagccgccgtg ccgctgccaccggggctgcaaaacgagtacctgcccgacccgttgggcggccggaccagt gtcgccttcggcggtggcggcctcatgccgcccggcgaggacctcaagctgcgcatcttg gagcagagctcgcgcaagagcgcacgcgtacagcagtaccgccgccttgcgtcggccgtt gaggacgccgtcccaggggcacaggacttgcgtgagtcgtcggcattcacgcagcgggag gatcacttccggcgcgtgcagaagcagctgctggtggacgtggcatcagcgcgcagccgc cgcaagcacgagttcatcctggagcagctgcgcaagagcatggtgacgcgacgcatcgtc aagcccgcattcggcgaggtcctggtgtacgagttcgagttccagaacccctacagccac gagcagacgtttgagctgcgcattaacaagccggccgaggtgacggtgctgtcgcgactg gaggactaccgcgctctgcgggccgccaacgcgcgcttcctgggcgtggtgtcgcagccg gtggggccgctggagcaggagatcatgagcggcaaccgcatctacctgcaggcgcacgag cggatcacgctgcccttcaggctgcagtccttcgagcccccggaggcctacaagtactcg gtgcagacaccggaggctcaggccaaccactccatgacggcacgcgcacgcgcggccgac atggccacacgcagtccgggtgcaccgcatcacagggcggcgggcggcaacaatgccggg gctaacgtgggcaacgacgggctgccctcggggcacgtggtggcggtggagctcatcagc accaaggacgacgtgccggtgtcggtgctggagctggagattgtgccgcggcccatcatc atcgaccgcaccttccggtactaccagccggagcggcagctgctgcgcaccaacatcaaa ttgcgcaacctcccgggcgccgccgcctcctacctggccaacgcaccgggggcgctgcgc aacgtgacggcggcgtgcagcaatcctgacgtcatcctgggcgttgggagcggcgcgctg gcgctggggccagaccgcgacgaggtgtacgtcaagtacaagatcggcgccgcgcctgag gtggcgcacttctacgtgctgctgtacatggaccgcctcatggcgcggccggtggaggtg tggcaggtgttcgtgcacgcgctgcgcaaggtggacatgcgggccatgatcgggcagacc agccaggccagcgtggtggtgcgcggcgcggtgtcgcggcgcgtggcgtccttcacgtct caccccgacgagctgctggtgtcgcccgactcgttcgtgctggtgggcggcgcgctgacg gaactgctgctgagcttccggccggtggctgtgggtgtcaaggacatcaaggtcaacatc gtggacagtgagacgcacgagctggtatacgcgctgctggtgtcggcggaggcgcagggg ccgctcatcacacggacgtttgaggtggagctgcccgtgggcactgtggccaacaagaag atcacctacaccaacccctaccagcacttccgcaccttcacgctgcgctcgaaccagccc tggctcgtgcacttcacgccgccgcggctgcagatgcccgcgggcgccacacggcccgtg ggcctcacgttcgacgcgcgcgccgccacgccgggcatcgtggacgcgctcatgttcgtg aatgatgacgaggacaagacggaggagtgcctcaagatccgtgtgcgcatttataagtag

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