Chlamydomonas reinhardtii: CHLRE_12g533000v5
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Entry
CHLRE_12g533000v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_12g533000v5
Enzymes [BR:
cre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CHLRE_12g533000v5
DNA repair and recombination proteins [BR:
cre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CHLRE_12g533000v5
Prokaryotic type
CHLRE_12g533000v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
66055656
NCBI-ProteinID:
XP_042918692
LinkDB
All DBs
Position
12:complement(5739609..5747364)
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AA seq
612 aa
AA seq
DB search
MSSKRKATEAPAAGEDGAAGPSSKKQAAASASAAAAAAGAGSAAAGGALVNPKRVRVLKP
GSIGKGPVVYWMSRDQRLADNWALLHAIEAAQGAAGSSQVAVAFNLVPAFLGAGARQFGF
MLRGLRQLAPRLEARGIKFYLLKGDPAHTLPQLVSGLGAGLLVTDYSPLRLGRTWRDQVC
SALGSVPVHEVDAHNVVPVWAASEKREVGARTLRPKIHKALPEFLREFPEVPTLPAWTPA
VAPEAVDWDGLISEVLSRGADVPEVEWCTPGEEAALEALTGPRGFLSPARLSLYDTKRND
PATPSALSGLSPYLHFGQLAPQRAALEAAKHRAKYKAAVESYLEELVVRRELADNFCHYC
PTYDSLEAAAEWARDSLDKHRTDKREFLYTRDQLECGATHDELWNAAQLEMVHVGKMHGF
MRMYWAKKILEWTQGPEQAIEWAIYLNDRYELDGRDPGGYTGVLWSMAGVHDMGWAERAV
FGKIRYMNYNGCKRKFDIKAYVAYVSKAVAEAKAKGRAAKLPSAAAAGASGAAAAGATAA
AAAAAAPGPSGAQAAKAAKAKAEPKEAKPKAAKAAAKAKGPKDEKAAAAGAKRKAAKPAK
SASSGEEGSDDE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaagcgcaaagccacggaggcgccggccgcgggcgaggacggcgccgcgggc
ccttccagcaagaagcaggcagctgcgtcggcctctgctgctgccgctgcggcgggcgct
ggctcggccgctgccggcggggcgctagtgaaccccaagcgcgtgcgggtgctcaagccc
ggcagcattggaaaggggcccgtcgtgtactggatgtctcgcgaccagcgcctggcggac
aactgggcgctgctgcacgccatcgaggcggcgcagggcgcggcgggcagcagccaggtg
gcggtggccttcaacctggtgcctgccttcctgggtgcgggcgcgcggcagttcggcttc
atgctgcgcgggctgcggcagctggcgccgcggctggaggcgcgcggcatcaagttctac
ctgctcaagggcgacccggcccacaccctgccgcagctggtgtcgggcctgggcgcgggc
ctgctggtgaccgactactcaccgctgcgcctgggccgcacctggagggaccaggtgtgc
tcggctctgggctctgtgccggtgcatgaggtggacgcccacaatgtggtgccggtgtgg
gccgccagcgagaagcgggaggtgggggcacgcacgctgcggcccaagatccacaaggcg
ctgcccgagttcctccgcgagttccccgaggtgcccacgctgcccgcctggactccggct
gtggcgccggaggctgtggactgggacggcctgatctcggaggtgctgtcgcgcggggcg
gacgtcccagaggtggagtggtgcacgccaggcgaggaggcggcgctggaggcgctgacc
ggtccgcgcggctttctgtccccagcgcgcctgtcgctgtacgacaccaagcgcaacgac
cccgccaccccctccgcgctgtctggcctgtcgccctacctgcactttgggcagctggcg
ccgcagcgggcggccctggaggcggccaagcaccgagccaagtacaaggctgcagtggag
tcgtacctggaggagctggtggtgcggcgcgagctggccgacaacttctgccactactgc
cccacatacgacagcctggaggcggcggcggagtgggcgcgcgacagcctggacaagcac
cggaccgacaagcgggagttcctgtacacccgcgatcagctggagtgcggcgccactcac
gacgagctgtggaacgcggctcagctggagatggtgcacgtgggcaagatgcacggcttc
atgcgcatgtactgggccaagaagatcctggagtggacccaggggccggagcaggccatc
gagtgggccatctacctgaacgaccgctacgagctggacggccgcgacccgggcggctac
acgggcgtactgtggagcatggcgggcgtgcacgacatgggctgggctgagcgggctgtg
ttcggcaagatccgctacatgaactacaacggctgcaagaggaagttcgacatcaaggcg
tacgtggcctacgtcagcaaagcggtggcggaggccaaagccaagggccgagccgccaag
ctgccttccgccgccgccgccggtgcttccggtgccgcggcggcgggggccacggcggcg
gcggcggcggcggcagcgcctgggccaagcggcgcgcaagcggcaaaggcggcgaaggcg
aaggcggagcccaaagaggcgaagccgaaggcggcgaaggcggcggccaaggcaaagggc
cctaaggacgagaaggcggcggcggcgggtgccaagcgcaaagcggccaagccggccaag
tcggcgtcttccggtgaggagggctcggatgacgagtag
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