Chlamydomonas reinhardtii: CHLRE_12g538500v5
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Entry
CHLRE_12g538500v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHLRE_12g538500v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_12g538500v5
Ribosome biogenesis [BR:
cre03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CHLRE_12g538500v5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
DSE1_N
Motif
Other DBs
NCBI-GeneID:
5718445
NCBI-ProteinID:
XP_042918791
UniProt:
A0A2K3D5C1
LinkDB
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Position
12:6491528..6496549
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AA seq
724 aa
AA seq
DB search
MLPGSASHGLVSSFSPGGDQFALSGPDGRIRVYETGSGRLLVSLGGPSDTAKANGGPAAN
GHLVENNTCIAWVVTKEKGKKKQAVGVRGVAVGTAAGDVKFYDVQLGELKWKAVDAVQGG
VKSLVFSAGQGVILATGANCSLVSVGVEDGAVKKRFEASKYPITAIALAPDGKHVFGGGS
TMQLWDVTSEERAAKYTGHPTEVRAVAFVPGQPHAISAATGERHVAVWDVPPAKKSKKQH
PAVTTLSLEEPAVAVDAACVSEGETFSVGAVSEGGEAYVWVCHRDSAGGGDADGGDATGG
SRASLACQLVMRLRVGDGSAAKGSHAGKDEEILGVQFQPGPSGPSLLVARGTSAKPAFET
LAVPLEAGADVVVSLRPVGGVLLQANQKGAAAAASAPGAQDKSVQPRPKQAPTSGASVTL
LGTDNIGAPVLSRAAAEAAAASGRKRGAEDDEDMSTAAAAGVEEEEVPDLPEGDVPLGER
VAALEARSLGTAGAAAEEAGTSGAAGAASSMPGGSAKADSLSVLLTQAIRSNDRALLERC
LATSSTTVIANTVARIVPMDAALFLKAAVDRLVSKPNRAVQLVPWIRAVLHHHTAYLMSA
PGVQPALTSLFQAIDSRVRLHDPLLRLYGRLGLVLHHTRTDKAAAGPERPGPEVEYVDDL
EEEPAAEDPFAPAPVSDDEDDEDDEDESGSEDEDGEAKFDAMLADGPQGSDDDEDLDSFL
DDDD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctggctctgcaagccacgggctggtttctagtttttcaccgggaggggaccag
ttcgctctttctgggcccgatggacgcattcgtgtgtatgagacaggctctgggcggctc
ttggtgtcgctaggagggccgtcagatacggcgaaagcaaatggagggccagctgcaaac
gggcatttggtggagaataacacatgcatcgcctgggttgtcaccaaggagaaagggaag
aagaagcaggccgtcggtgtgcgcggtgtcgcagttgggacggccgccggcgacgtgaag
ttctatgacgtgcagctaggcgagcttaaatggaaggcagtggacgctgtccaagggggc
gtcaaatcgctggttttctcggccggtcagggcgttatccttgcaactggagccaactgc
tcgctggtgtcggtcggcgtggaggatggcgcggtgaagaagcggttcgaggcgagcaag
tacccgattacggccatcgccctggcgccagatggcaagcacgtcttcgggggcggttcc
accatgcagctttgggacgtgacctcggaggagcgggcggccaagtacactgggcacccg
accgaagtgcgcgccgtggcctttgtgccgggtcagccgcacgccatctccgcggcgaca
ggcgagcggcacgtggcggtgtgggacgtgccgcccgccaagaagtccaaaaagcagcac
ccggccgtcaccacgctcagcctggaggagccggcggtggccgtggacgcggcgtgcgtg
tcggagggggaaacgttcagcgtgggcgcggtgtcggagggcggcgaggcatacgtgtgg
gtttgccaccgcgactcggcgggcggcggcgacgcggatggtggggacgctacaggcggg
agccgggccagcctggcgtgtcagctggtgatgcggctgcgggtgggcgacggcagcgcc
gccaaggggtcacatgcgggcaaggatgaagagattctaggagtgcaattccaaccaggg
ccttccggtccgtcgctgctggtcgcgcgggggacgtcggcgaagcccgcgtttgagaca
ctggccgtgcccttagaagcgggcgccgacgttgtggtgtccctccgccccgtcggcggc
gtgctgctgcaggccaaccagaagggcgcggcggcggcggcgtccgcgcccggcgcgcag
gacaagtctgtgcagccgcggccaaagcaggcgcccaccagcggcgcgagcgtgacgctg
ctgggcactgacaacatcggcgcgccggtgctgtctcgcgcggcagcggaggcggcggct
gcctcgggccggaaacgcggcgccgaggacgacgaggacatgagcacagcagcagcagcg
ggagtggaggaggaggaggtgccggacctgccggagggcgacgtgccgctcggggagcgc
gtggcggcgctggaggcgcggtcactggggacggcgggcgctgcggcggaggaggcgggc
accagcggcgccgccggcgcggcgtcgtccatgcctggcggcagcgccaaggcggactcg
ctgtcggtgctgctgacgcaggccatccgcagcaacgaccgcgcgctgctggagcgctgc
ctggccaccagcagcaccaccgtcatcgccaacaccgtggcgcgcatcgtgcccatggac
gcggcgctgttcctcaaagctgccgtggaccggctcgtgtccaagcccaaccgcgcggtg
cagctggtgccctggatccgggccgtgctgcaccaccacaccgcctacctcatgtcggcg
cccggcgtgcagccggcgctcaccagcctgttccaggccattgactcgcgcgtgcggctg
cacgacccgctgctgcgcctgtacgggcggctggggcttgtgctacaccacacgcggacg
gacaaggcggcagcggggccggagcggccagggccagaggtggagtacgtggacgacctg
gaggaggagcccgcggccgaggaccccttcgcgcccgcacccgtgtcagatgacgaggat
gacgaggacgatgaggacgagtcggggtcggaggacgaggacggcgaggccaagttcgat
gccatgctggcggacggaccgcagggcagcgatgacgacgaagacctggacagcttcctt
gatgacgatgactga
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