KEGG   Chlamydomonas reinhardtii: CHLRE_12g538500v5
Entry
CHLRE_12g538500v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CHLRE_12g538500v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cre03009]
    CHLRE_12g538500v5
Ribosome biogenesis [BR:cre03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    CHLRE_12g538500v5
SSDB
Motif
Pfam: Utp12 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR5 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd DSE1_N
Other DBs
NCBI-GeneID: 5718445
NCBI-ProteinID: XP_042918791
UniProt: A0A2K3D5C1
LinkDB
Position
12:6491528..6496549
AA seq 724 aa
MLPGSASHGLVSSFSPGGDQFALSGPDGRIRVYETGSGRLLVSLGGPSDTAKANGGPAAN
GHLVENNTCIAWVVTKEKGKKKQAVGVRGVAVGTAAGDVKFYDVQLGELKWKAVDAVQGG
VKSLVFSAGQGVILATGANCSLVSVGVEDGAVKKRFEASKYPITAIALAPDGKHVFGGGS
TMQLWDVTSEERAAKYTGHPTEVRAVAFVPGQPHAISAATGERHVAVWDVPPAKKSKKQH
PAVTTLSLEEPAVAVDAACVSEGETFSVGAVSEGGEAYVWVCHRDSAGGGDADGGDATGG
SRASLACQLVMRLRVGDGSAAKGSHAGKDEEILGVQFQPGPSGPSLLVARGTSAKPAFET
LAVPLEAGADVVVSLRPVGGVLLQANQKGAAAAASAPGAQDKSVQPRPKQAPTSGASVTL
LGTDNIGAPVLSRAAAEAAAASGRKRGAEDDEDMSTAAAAGVEEEEVPDLPEGDVPLGER
VAALEARSLGTAGAAAEEAGTSGAAGAASSMPGGSAKADSLSVLLTQAIRSNDRALLERC
LATSSTTVIANTVARIVPMDAALFLKAAVDRLVSKPNRAVQLVPWIRAVLHHHTAYLMSA
PGVQPALTSLFQAIDSRVRLHDPLLRLYGRLGLVLHHTRTDKAAAGPERPGPEVEYVDDL
EEEPAAEDPFAPAPVSDDEDDEDDEDESGSEDEDGEAKFDAMLADGPQGSDDDEDLDSFL
DDDD
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgctgcctggctctgcaagccacgggctggtttctagtttttcaccgggaggggaccag
ttcgctctttctgggcccgatggacgcattcgtgtgtatgagacaggctctgggcggctc
ttggtgtcgctaggagggccgtcagatacggcgaaagcaaatggagggccagctgcaaac
gggcatttggtggagaataacacatgcatcgcctgggttgtcaccaaggagaaagggaag
aagaagcaggccgtcggtgtgcgcggtgtcgcagttgggacggccgccggcgacgtgaag
ttctatgacgtgcagctaggcgagcttaaatggaaggcagtggacgctgtccaagggggc
gtcaaatcgctggttttctcggccggtcagggcgttatccttgcaactggagccaactgc
tcgctggtgtcggtcggcgtggaggatggcgcggtgaagaagcggttcgaggcgagcaag
tacccgattacggccatcgccctggcgccagatggcaagcacgtcttcgggggcggttcc
accatgcagctttgggacgtgacctcggaggagcgggcggccaagtacactgggcacccg
accgaagtgcgcgccgtggcctttgtgccgggtcagccgcacgccatctccgcggcgaca
ggcgagcggcacgtggcggtgtgggacgtgccgcccgccaagaagtccaaaaagcagcac
ccggccgtcaccacgctcagcctggaggagccggcggtggccgtggacgcggcgtgcgtg
tcggagggggaaacgttcagcgtgggcgcggtgtcggagggcggcgaggcatacgtgtgg
gtttgccaccgcgactcggcgggcggcggcgacgcggatggtggggacgctacaggcggg
agccgggccagcctggcgtgtcagctggtgatgcggctgcgggtgggcgacggcagcgcc
gccaaggggtcacatgcgggcaaggatgaagagattctaggagtgcaattccaaccaggg
ccttccggtccgtcgctgctggtcgcgcgggggacgtcggcgaagcccgcgtttgagaca
ctggccgtgcccttagaagcgggcgccgacgttgtggtgtccctccgccccgtcggcggc
gtgctgctgcaggccaaccagaagggcgcggcggcggcggcgtccgcgcccggcgcgcag
gacaagtctgtgcagccgcggccaaagcaggcgcccaccagcggcgcgagcgtgacgctg
ctgggcactgacaacatcggcgcgccggtgctgtctcgcgcggcagcggaggcggcggct
gcctcgggccggaaacgcggcgccgaggacgacgaggacatgagcacagcagcagcagcg
ggagtggaggaggaggaggtgccggacctgccggagggcgacgtgccgctcggggagcgc
gtggcggcgctggaggcgcggtcactggggacggcgggcgctgcggcggaggaggcgggc
accagcggcgccgccggcgcggcgtcgtccatgcctggcggcagcgccaaggcggactcg
ctgtcggtgctgctgacgcaggccatccgcagcaacgaccgcgcgctgctggagcgctgc
ctggccaccagcagcaccaccgtcatcgccaacaccgtggcgcgcatcgtgcccatggac
gcggcgctgttcctcaaagctgccgtggaccggctcgtgtccaagcccaaccgcgcggtg
cagctggtgccctggatccgggccgtgctgcaccaccacaccgcctacctcatgtcggcg
cccggcgtgcagccggcgctcaccagcctgttccaggccattgactcgcgcgtgcggctg
cacgacccgctgctgcgcctgtacgggcggctggggcttgtgctacaccacacgcggacg
gacaaggcggcagcggggccggagcggccagggccagaggtggagtacgtggacgacctg
gaggaggagcccgcggccgaggaccccttcgcgcccgcacccgtgtcagatgacgaggat
gacgaggacgatgaggacgagtcggggtcggaggacgaggacggcgaggccaagttcgat
gccatgctggcggacggaccgcagggcagcgatgacgacgaagacctggacagcttcctt
gatgacgatgactga

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