Chlamydomonas reinhardtii: CHLRE_12g538750v5
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Entry
CHLRE_12g538750v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHLRE_12g538750v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_12g538750v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CHLRE_12g538750v5
mRNA degradation factors
5'-3' decay
Lsm complex
CHLRE_12g538750v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
5718440
NCBI-ProteinID:
XP_001692854
UniProt:
A8IVB1
LinkDB
All DBs
Position
12:complement(6516480..6517887)
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AA seq
126 aa
AA seq
DB search
MASLQEVPLPGTALAEELDQRLLVVLRDGRKLLGTLRSFDQFANLVIEGAVERIIVGEQF
GDIPMGLQIIRAENVVLLGRVDEAIDAPEGLTRIPAAQIKEAQKGEKELNKLKSTIRARM
DFLDLD
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcactccaagaagttcccttgcctggaacggcgctagcggaggagctggatcag
cggctgttggtagttttgcgcgatgggcgcaaattgctcggcacgctccggtcctttgac
cagttcgcaaacctcgtcattgaaggagctgtggagcggattattgttggagagcagttc
ggcgacatccctatgggcctgcaaattatccgcgcggagaatgtggtgctgctggggaga
gtggacgaggcgatagacgccccggagggcctcacgcgcatacctgccgcgcaaatcaag
gaggcacagaagggggagaaggagctgaacaagctgaagagcacgatacgtgcgcggatg
gacttcctggacctggactga
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