KEGG   Chlamydomonas reinhardtii: CHLRE_12g542800v5
Entry
CHLRE_12g542800v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CHLRE_12g542800v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cre03021]
    CHLRE_12g542800v5
Enzymes [BR:cre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CHLRE_12g542800v5
Transcription machinery [BR:cre03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     CHLRE_12g542800v5
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 Baculo_Y142
Other DBs
NCBI-GeneID: 5719529
NCBI-ProteinID: XP_042919169
UniProt: A0A2K3D6S1
LinkDB
Position
12:complement(9089220..9101435)
AA seq 1226 aa
MTAAAEGGAKEAGKDAEPMQVDGADGPGPDGMEAVGGDEALAEALYGDPTRLTEPIKTVN
DKFALLPAFLKVRGLVKQHLDSFNYLLNSELRKIVAANEKVTCDTDPNFYLKYTNIYVGG
PSVDEDMVQVGTTPQQCRLRDATYSAPITVDIEYTRGKEIVVKRGRGGVGAVSIGRMPLM
LRCDRCVLYNKNEAQLAQLGECPLDPGGYFIVRGTEKVILIQEQLSKNRIIIDTDSHNEV
MASVTSSTHERKSKTNIVFSKGKIYLKHNAFQDDVNIFVVLKAMGCESDQEAVQAVVGGG
FGAKLVPAPAGAAGAAGGGGKGSVIAPDAASGEGAAALAALLVPSVQEAKGLGVFTQMQA
LDYLGGKLKASPKFGGGDQKRRKSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVR
RMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRAT
QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ
FEKTRKVSGPRALHPSQWGMLCPADTPEGESCGLVKNLALMTHVTTDEEEGPLIRLLVML
GTEPITAIAPAEMHGHGGALVFLNGTLVGVHRRPHRLVREARELRRAGHLGEFVHVHLQG
DACYISCDGGRVCRPLIICDAGVPRVRQEHITKLRSGEWGFPDFLARGLLEYLDVNEENV
SLIALYEKDCNKLTTHLEIEPFTIMGVVSGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYN
QMSRMDSLLYLLVYPQRPLLTSRTIELVGFDKLGAGQNASVAVMSYSGYDIEDAIVMNKY
SLDRGFGRCIVLKKYGASLRKYANRASDRIVAPLPLPGQKAVAPRFRLLDRDGIACVGDY
ILPGDVYINMQRPSNTRDPLPAANMPDAFYRPSPMSWKSTPAMAGERCIVDKVQITANDE
SHYSIKVLIRHTRRPELGDKFSSRHGQKGVVGNIVRQEDFPFSERGVCPDLIMNPHGFPS
RMTVGKMIELLGSKAAVSCGRFHYGTAFGEPSNLADKVEDISATLVRHGFSYSGKDFLTS
GITGEPLEAYIFMGPVYYQKLKHMVLDKMHARARGPRVVLTRQPTEGRSRDGGLRLGEME
RDCLIAYGASMLLLERLMISSDQFEVHVDARSGLLGWWDAHRNCPVSPVDRTSDNMATIK
IPYACKLLFQELQSMNIIPRLRLADL
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgacagcggcggcggagggcggggcgaaggaggcgggcaaggacgcggagcccatgcag
gtggacggggcagatggccccggccctgatggcatggaggcggtcggcggggatgaggct
ctggcagaggctctgtacggcgaccccacacgcctcacagagcccattaagactgtgaat
gacaagttcgcgctgctgcctgcgttcctcaaggtccgcggcctggtgaagcagcacctg
gactcgttcaactacctgctcaacagcgagttgcgcaagattgtggcggccaacgagaag
gtcacgtgcgacacagaccccaacttctatctcaagtacaccaacatctacgtgggcggg
cccagtgtggacgaagacatggtgcaggtgggcaccacgccgcagcagtgccggctgcgt
gacgccacctactcggcgcccatcactgtggacatcgagtacacgcgcggcaaggagatc
gtggtcaagcgcggccgcggcggcgtgggcgcggtcagcatcggccgcatgccgctcatg
ctgcgctgcgacaggtgtgtgctgtacaacaaaaatgaggcacagctggcgcagctgggc
gagtgcccgctggacccgggcggatacttcatcgtgcgcggcacggagaaggtgattctg
atccaggagcagctgagcaagaaccgcatcatcatcgacaccgacagccacaatgaggtg
atggcgtccgtgacctcctccacgcacgagcgcaagtccaagaccaacatcgtgttcagc
aagggcaagatctacctcaagcacaacgccttccaggacgacgtcaacatcttcgtggtg
ctcaaagccatgggctgcgagagcgaccaggaggcggtgcaggcggtggtgggaggcggc
ttcggagccaagctggtgccggcgccggcaggcgccgcgggcgccgcaggcggcggcggc
aagggctcggtgatcgcgccggacgcggccagtggcgagggcgcggcggctctggcggcg
ctgctggtgcccagtgtgcaagaggccaaggggctgggcgtgttcacgcagatgcaggcg
ctggactacctgggcggcaagctcaaggccagccccaagttcggcggtggcgaccagaag
cggcgcaagagcaaggtggacgaggcgcgcgatgtgctggcgcacgtggtgctgtgccac
gtgccggtgccgcgctaccagttcgcgcagaagatcgcctacgtggcggtgatggtgcgg
cgcatgctgtacgccgtgctggacccggcctgcatcgacgaccgcgactactacggcaac
aagcgcctggagctggcgggcggcctgctgtctctgctgtttgaggacctgttcaagcgc
ctcaacagcgacatcaagcgccaggccgacgccgtgctcagcaaggccaaccgggccacg
cagtttgacgtggccaaggccatccgcaccgacaccatcacctacggcctggagtcggcg
ctcagcagcggcaactggatcatccgccgtttccgcatggagcgcaagggagtcacgcag
gtgctgagccggctgtcgttcatcgcggccatgggcatgatgacgcgcatgacgtcgcag
ttcgagaagacgcgcaaggtgtctggccctcgcgcgctgcacccgagccagtggggcatg
ctgtgccccgccgacacgcccgagggcgagtcgtgcggcctggtcaagaacctggcgctc
atgacgcacgtcaccacggacgaggaggaggggccgctgatccggctgctggtgatgctg
ggcacggagcccatcaccgccatcgcgcccgcggagatgcacgggcacggcggcgcgctg
gtattcctgaacggcacgttggtgggagtgcaccgccggccgcacaggctggtccgggag
gccagggagctgcggcgcgctgggcacctgggcgagttcgtgcacgtgcacctgcagggt
gacgcctgctacatctcctgcgacggcggccgcgtgtgccgcccgctcatcatctgtgac
gccggagtgccgcgggtgcgccaggagcacatcaccaagctgcgaagcggcgagtggggc
ttcccggacttcctggcgcggggcctgctggagtacctggacgtgaacgaggagaacgtc
agcctcatcgcgctgtacgagaaggactgcaacaagctcacgacgcacctggagatcgag
ccttttacgatcatgggcgtggtgtcgggcctcatccccttcccccaccacaaccagtcg
ccgcgcaacacctaccagtgcgccatgggcaagcaggccatgggcaacatcgcctacaac
cagatgagccgcatggacagcctgctgtacctgctggtgtacccgcagcggccgctgctc
acctccaggaccatcgagctggtgggcttcgacaagctgggtgcgggccagaacgcctcg
gtggcggtgatgagctacagcgggtacgacattgaggacgccatcgtgatgaacaagtac
agcctggaccgcggcttcggccgctgcatcgtgctcaagaagtacggagccagcctgcgc
aagtacgccaaccgcgcctccgaccgcatcgtggcgccgctgccgctgcccggccagaag
gcggtggcgccgcgcttccggctgctggaccgggacggcatcgcctgcgtgggcgactac
atcctgccgggcgacgtgtacatcaacatgcagcggcccagcaacacgcgcgacccgctg
ccagcagccaacatgcccgacgccttctacaggcccagccccatgtcttggaagtccacc
cccgccatggccggcgagcgctgcatcgtggacaaggtgcagatcaccgccaacgacgag
tcccactactccatcaaggtgctgatccggcacacgcggcggcccgagctgggcgacaag
ttcagcagtcggcacgggcagaagggcgtggtgggcaacatcgtgcggcaggaggacttc
cccttcagcgagcgcggcgtgtgccccgacctcatcatgaacccgcacggcttcccctcg
cgcatgacggtgggcaagatgattgagctgctgggctccaaggcggcggtcagctgcggc
cgcttccactacggcaccgccttcggagagccgtccaacctggccgacaaggtcgaggac
atcagcgccacgctggtgcgccacggcttcagctacagcggcaaggacttcctgaccagc
ggcatcacgggcgagccgctggaggcctacatcttcatggggcccgtctactaccagaag
ctcaagcacatggtgctggacaagatgcacgcaagagcgcgcggcccgcgtgtggtgctc
acgcgccagcccacggagggccgctcgcgcgacggcgggctgcggctgggcgagatggag
cgcgactgcctcatcgcgtacggcgcctccatgctgctgctggagcggctcatgatcagc
tccgaccagttcgaggtgcacgtggacgcgcgcagcggcctgctgggctggtgggacgcg
caccgcaactgcccggtgagccccgtggaccgcaccagcgacaacatggccaccatcaag
atcccctacgcctgcaagctgctgttccaggagctgcagtccatgaacatcatcccgcgg
ctgcggctggcggacctgtag

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