Chlamydomonas reinhardtii: CHLRE_12g542800v5
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Entry
CHLRE_12g542800v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHLRE_12g542800v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cre03021
]
CHLRE_12g542800v5
Enzymes [BR:
cre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHLRE_12g542800v5
Transcription machinery [BR:
cre03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CHLRE_12g542800v5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_5
Baculo_Y142
Motif
Other DBs
NCBI-GeneID:
5719529
NCBI-ProteinID:
XP_042919169
UniProt:
A0A2K3D6S1
LinkDB
All DBs
Position
12:complement(9089220..9101435)
Genome browser
AA seq
1226 aa
AA seq
DB search
MTAAAEGGAKEAGKDAEPMQVDGADGPGPDGMEAVGGDEALAEALYGDPTRLTEPIKTVN
DKFALLPAFLKVRGLVKQHLDSFNYLLNSELRKIVAANEKVTCDTDPNFYLKYTNIYVGG
PSVDEDMVQVGTTPQQCRLRDATYSAPITVDIEYTRGKEIVVKRGRGGVGAVSIGRMPLM
LRCDRCVLYNKNEAQLAQLGECPLDPGGYFIVRGTEKVILIQEQLSKNRIIIDTDSHNEV
MASVTSSTHERKSKTNIVFSKGKIYLKHNAFQDDVNIFVVLKAMGCESDQEAVQAVVGGG
FGAKLVPAPAGAAGAAGGGGKGSVIAPDAASGEGAAALAALLVPSVQEAKGLGVFTQMQA
LDYLGGKLKASPKFGGGDQKRRKSKVDEARDVLAHVVLCHVPVPRYQFAQKIAYVAVMVR
RMLYAVLDPACIDDRDYYGNKRLELAGGLLSLLFEDLFKRLNSDIKRQADAVLSKANRAT
QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ
FEKTRKVSGPRALHPSQWGMLCPADTPEGESCGLVKNLALMTHVTTDEEEGPLIRLLVML
GTEPITAIAPAEMHGHGGALVFLNGTLVGVHRRPHRLVREARELRRAGHLGEFVHVHLQG
DACYISCDGGRVCRPLIICDAGVPRVRQEHITKLRSGEWGFPDFLARGLLEYLDVNEENV
SLIALYEKDCNKLTTHLEIEPFTIMGVVSGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYN
QMSRMDSLLYLLVYPQRPLLTSRTIELVGFDKLGAGQNASVAVMSYSGYDIEDAIVMNKY
SLDRGFGRCIVLKKYGASLRKYANRASDRIVAPLPLPGQKAVAPRFRLLDRDGIACVGDY
ILPGDVYINMQRPSNTRDPLPAANMPDAFYRPSPMSWKSTPAMAGERCIVDKVQITANDE
SHYSIKVLIRHTRRPELGDKFSSRHGQKGVVGNIVRQEDFPFSERGVCPDLIMNPHGFPS
RMTVGKMIELLGSKAAVSCGRFHYGTAFGEPSNLADKVEDISATLVRHGFSYSGKDFLTS
GITGEPLEAYIFMGPVYYQKLKHMVLDKMHARARGPRVVLTRQPTEGRSRDGGLRLGEME
RDCLIAYGASMLLLERLMISSDQFEVHVDARSGLLGWWDAHRNCPVSPVDRTSDNMATIK
IPYACKLLFQELQSMNIIPRLRLADL
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggcggcggagggcggggcgaaggaggcgggcaaggacgcggagcccatgcag
gtggacggggcagatggccccggccctgatggcatggaggcggtcggcggggatgaggct
ctggcagaggctctgtacggcgaccccacacgcctcacagagcccattaagactgtgaat
gacaagttcgcgctgctgcctgcgttcctcaaggtccgcggcctggtgaagcagcacctg
gactcgttcaactacctgctcaacagcgagttgcgcaagattgtggcggccaacgagaag
gtcacgtgcgacacagaccccaacttctatctcaagtacaccaacatctacgtgggcggg
cccagtgtggacgaagacatggtgcaggtgggcaccacgccgcagcagtgccggctgcgt
gacgccacctactcggcgcccatcactgtggacatcgagtacacgcgcggcaaggagatc
gtggtcaagcgcggccgcggcggcgtgggcgcggtcagcatcggccgcatgccgctcatg
ctgcgctgcgacaggtgtgtgctgtacaacaaaaatgaggcacagctggcgcagctgggc
gagtgcccgctggacccgggcggatacttcatcgtgcgcggcacggagaaggtgattctg
atccaggagcagctgagcaagaaccgcatcatcatcgacaccgacagccacaatgaggtg
atggcgtccgtgacctcctccacgcacgagcgcaagtccaagaccaacatcgtgttcagc
aagggcaagatctacctcaagcacaacgccttccaggacgacgtcaacatcttcgtggtg
ctcaaagccatgggctgcgagagcgaccaggaggcggtgcaggcggtggtgggaggcggc
ttcggagccaagctggtgccggcgccggcaggcgccgcgggcgccgcaggcggcggcggc
aagggctcggtgatcgcgccggacgcggccagtggcgagggcgcggcggctctggcggcg
ctgctggtgcccagtgtgcaagaggccaaggggctgggcgtgttcacgcagatgcaggcg
ctggactacctgggcggcaagctcaaggccagccccaagttcggcggtggcgaccagaag
cggcgcaagagcaaggtggacgaggcgcgcgatgtgctggcgcacgtggtgctgtgccac
gtgccggtgccgcgctaccagttcgcgcagaagatcgcctacgtggcggtgatggtgcgg
cgcatgctgtacgccgtgctggacccggcctgcatcgacgaccgcgactactacggcaac
aagcgcctggagctggcgggcggcctgctgtctctgctgtttgaggacctgttcaagcgc
ctcaacagcgacatcaagcgccaggccgacgccgtgctcagcaaggccaaccgggccacg
cagtttgacgtggccaaggccatccgcaccgacaccatcacctacggcctggagtcggcg
ctcagcagcggcaactggatcatccgccgtttccgcatggagcgcaagggagtcacgcag
gtgctgagccggctgtcgttcatcgcggccatgggcatgatgacgcgcatgacgtcgcag
ttcgagaagacgcgcaaggtgtctggccctcgcgcgctgcacccgagccagtggggcatg
ctgtgccccgccgacacgcccgagggcgagtcgtgcggcctggtcaagaacctggcgctc
atgacgcacgtcaccacggacgaggaggaggggccgctgatccggctgctggtgatgctg
ggcacggagcccatcaccgccatcgcgcccgcggagatgcacgggcacggcggcgcgctg
gtattcctgaacggcacgttggtgggagtgcaccgccggccgcacaggctggtccgggag
gccagggagctgcggcgcgctgggcacctgggcgagttcgtgcacgtgcacctgcagggt
gacgcctgctacatctcctgcgacggcggccgcgtgtgccgcccgctcatcatctgtgac
gccggagtgccgcgggtgcgccaggagcacatcaccaagctgcgaagcggcgagtggggc
ttcccggacttcctggcgcggggcctgctggagtacctggacgtgaacgaggagaacgtc
agcctcatcgcgctgtacgagaaggactgcaacaagctcacgacgcacctggagatcgag
ccttttacgatcatgggcgtggtgtcgggcctcatccccttcccccaccacaaccagtcg
ccgcgcaacacctaccagtgcgccatgggcaagcaggccatgggcaacatcgcctacaac
cagatgagccgcatggacagcctgctgtacctgctggtgtacccgcagcggccgctgctc
acctccaggaccatcgagctggtgggcttcgacaagctgggtgcgggccagaacgcctcg
gtggcggtgatgagctacagcgggtacgacattgaggacgccatcgtgatgaacaagtac
agcctggaccgcggcttcggccgctgcatcgtgctcaagaagtacggagccagcctgcgc
aagtacgccaaccgcgcctccgaccgcatcgtggcgccgctgccgctgcccggccagaag
gcggtggcgccgcgcttccggctgctggaccgggacggcatcgcctgcgtgggcgactac
atcctgccgggcgacgtgtacatcaacatgcagcggcccagcaacacgcgcgacccgctg
ccagcagccaacatgcccgacgccttctacaggcccagccccatgtcttggaagtccacc
cccgccatggccggcgagcgctgcatcgtggacaaggtgcagatcaccgccaacgacgag
tcccactactccatcaaggtgctgatccggcacacgcggcggcccgagctgggcgacaag
ttcagcagtcggcacgggcagaagggcgtggtgggcaacatcgtgcggcaggaggacttc
cccttcagcgagcgcggcgtgtgccccgacctcatcatgaacccgcacggcttcccctcg
cgcatgacggtgggcaagatgattgagctgctgggctccaaggcggcggtcagctgcggc
cgcttccactacggcaccgccttcggagagccgtccaacctggccgacaaggtcgaggac
atcagcgccacgctggtgcgccacggcttcagctacagcggcaaggacttcctgaccagc
ggcatcacgggcgagccgctggaggcctacatcttcatggggcccgtctactaccagaag
ctcaagcacatggtgctggacaagatgcacgcaagagcgcgcggcccgcgtgtggtgctc
acgcgccagcccacggagggccgctcgcgcgacggcgggctgcggctgggcgagatggag
cgcgactgcctcatcgcgtacggcgcctccatgctgctgctggagcggctcatgatcagc
tccgaccagttcgaggtgcacgtggacgcgcgcagcggcctgctgggctggtgggacgcg
caccgcaactgcccggtgagccccgtggaccgcaccagcgacaacatggccaccatcaag
atcccctacgcctgcaagctgctgttccaggagctgcagtccatgaacatcatcccgcgg
ctgcggctggcggacctgtag
DBGET
integrated database retrieval system