Chlamydomonas reinhardtii: CHLRE_12g542950v5
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Entry
CHLRE_12g542950v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14308
nuclear pore complex protein Nup54
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHLRE_12g542950v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_12g542950v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CHLRE_12g542950v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
5719533
NCBI-ProteinID:
XP_042919167
UniProt:
A0A2K3D6R8
LinkDB
All DBs
Position
12:complement(9068010..9072475)
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AA seq
467 aa
AA seq
DB search
MASPFSFGAAPAAPPASPFGFSTANAAAAAPNTAPAAGTTGGLFGVSSTPAGGFSFGTAA
AAAPTATPAFGTTAFGATAAAPVFGATTSTFGAPAATPSLFGTAPTQGFGATTTATPSLF
GATAAPATGTSAFNFGSAPAAGTTNTGLFGAPAAATTAANIFGQPAQQPGQQANMFGAAA
QPQLPGLDPSGLTQDDAVRALTRLAAAYTPSSADYRFQTLFASVVERPEQRVKPAGHVDE
NRWRAALAAVKGPDNPQKLWPVAANGFRDLNTRSRMQAEAVAQNANRLRELQDRAAGMSR
RTTGEFRSRVEALQRQHTDLSHKLLHVMRCVDALESRLALSAGYNAQQSRQQVAELGRQL
GRLEEAVAPASAAAGLERRLEAVAAAARMRAGSAESSGGVASVKLDERSQAQLFAVLRDH
AEAVRQLQGVLKADELDVEVLKRLVAAGPAGPGGVGAELAGAAMGVM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcccttctcgttcggcgctgcaccggcagcaccacctgccagccctttcggc
ttctccacggcgaatgcagctgctgcagccccaaacacggcaccagccgctggcacgacg
ggcgggctctttggtgtgagctccactcctgcgggcggattcagctttggtacagcagca
gccgcggcaccgactgcaacacctgccttcggaaccacggccttcggtgctacagcggcg
gcgccggtctttggggccacaacgtcgacctttggagcgccggcggcgactccgtccctg
tttggcaccgcgccaacccaaggcttcggagcaaccaccactgcgacgccgtcgctgttt
ggcgccactgcggcgcccgcgaccggcactagtgccttcaactttggctcggcgccggcc
gcgggcacgaccaacactggactgttcggcgcgcccgctgccgccaccacggcagcaaac
atcttcggtcagccagcgcagcagccggggcaacaagccaacatgttcggggccgcggcc
cagccgcagctgccggggctcgaccccagcggcctcacacaggatgacgctgtgcgcgcg
ctgacgcgcctggccgccgcctacacgccctccagcgccgactaccgcttccagacgctg
ttcgccagcgtggtggagcgcccggagcagcgcgtcaagccggcggggcacgtggacgag
aaccgctggcgcgcggcgctggccgccgtcaaggggcccgacaacccgcagaagctgtgg
ccggtggccgccaacggcttccgcgacctcaacacgcgcagccgcatgcaggcagaggcc
gtggcgcagaacgccaaccgcctgcgggagctgcaggaccgcgccgccggcatgtcccgc
cgcaccaccggcgagttccgctcgcgtgtagaagcgctgcagcggcagcacaccgacctc
agccacaagctgctgcacgtgatgcgctgcgtggatgcactggagagccgtctggcgctg
tcggcgggctacaacgcgcagcagtccaggcaacaggtggcagagctgggccggcagctg
gggcggctggaggaggccgtggcgccggcctcagcggcggcggggctggagcgccggctc
gaggcagtcgcggctgcggcgcgcatgcgcgctggaagcgccgagtcctcgggcggcgtt
gcgtcggtgaagctggatgagcgctcgcaggcgcagctgttcgcggtgctgcgcgaccac
gctgaggccgtgcgccagctgcagggtgtgctcaaggccgacgagctggacgtggaggtg
ctcaagcgcctggtggcggcggggccggcagggccgggcggcgtgggtgccgagctggcg
ggcgccgccatgggcgtcatgtga
DBGET
integrated database retrieval system