KEGG   Chlamydomonas reinhardtii: CHLRE_12g542950v5
Entry
CHLRE_12g542950v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K14308  nuclear pore complex protein Nup54
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CHLRE_12g542950v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cre03019]
    CHLRE_12g542950v5
Messenger RNA biogenesis [BR:cre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CHLRE_12g542950v5
SSDB
Motif
Pfam: Nup54 Nucleoporin_FG Exonuc_VII_L
Other DBs
NCBI-GeneID: 5719533
NCBI-ProteinID: XP_042919167
UniProt: A0A2K3D6R8
LinkDB
Position
12:complement(9068010..9072475)
AA seq 467 aa
MASPFSFGAAPAAPPASPFGFSTANAAAAAPNTAPAAGTTGGLFGVSSTPAGGFSFGTAA
AAAPTATPAFGTTAFGATAAAPVFGATTSTFGAPAATPSLFGTAPTQGFGATTTATPSLF
GATAAPATGTSAFNFGSAPAAGTTNTGLFGAPAAATTAANIFGQPAQQPGQQANMFGAAA
QPQLPGLDPSGLTQDDAVRALTRLAAAYTPSSADYRFQTLFASVVERPEQRVKPAGHVDE
NRWRAALAAVKGPDNPQKLWPVAANGFRDLNTRSRMQAEAVAQNANRLRELQDRAAGMSR
RTTGEFRSRVEALQRQHTDLSHKLLHVMRCVDALESRLALSAGYNAQQSRQQVAELGRQL
GRLEEAVAPASAAAGLERRLEAVAAAARMRAGSAESSGGVASVKLDERSQAQLFAVLRDH
AEAVRQLQGVLKADELDVEVLKRLVAAGPAGPGGVGAELAGAAMGVM
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggcgtcgcccttctcgttcggcgctgcaccggcagcaccacctgccagccctttcggc
ttctccacggcgaatgcagctgctgcagccccaaacacggcaccagccgctggcacgacg
ggcgggctctttggtgtgagctccactcctgcgggcggattcagctttggtacagcagca
gccgcggcaccgactgcaacacctgccttcggaaccacggccttcggtgctacagcggcg
gcgccggtctttggggccacaacgtcgacctttggagcgccggcggcgactccgtccctg
tttggcaccgcgccaacccaaggcttcggagcaaccaccactgcgacgccgtcgctgttt
ggcgccactgcggcgcccgcgaccggcactagtgccttcaactttggctcggcgccggcc
gcgggcacgaccaacactggactgttcggcgcgcccgctgccgccaccacggcagcaaac
atcttcggtcagccagcgcagcagccggggcaacaagccaacatgttcggggccgcggcc
cagccgcagctgccggggctcgaccccagcggcctcacacaggatgacgctgtgcgcgcg
ctgacgcgcctggccgccgcctacacgccctccagcgccgactaccgcttccagacgctg
ttcgccagcgtggtggagcgcccggagcagcgcgtcaagccggcggggcacgtggacgag
aaccgctggcgcgcggcgctggccgccgtcaaggggcccgacaacccgcagaagctgtgg
ccggtggccgccaacggcttccgcgacctcaacacgcgcagccgcatgcaggcagaggcc
gtggcgcagaacgccaaccgcctgcgggagctgcaggaccgcgccgccggcatgtcccgc
cgcaccaccggcgagttccgctcgcgtgtagaagcgctgcagcggcagcacaccgacctc
agccacaagctgctgcacgtgatgcgctgcgtggatgcactggagagccgtctggcgctg
tcggcgggctacaacgcgcagcagtccaggcaacaggtggcagagctgggccggcagctg
gggcggctggaggaggccgtggcgccggcctcagcggcggcggggctggagcgccggctc
gaggcagtcgcggctgcggcgcgcatgcgcgctggaagcgccgagtcctcgggcggcgtt
gcgtcggtgaagctggatgagcgctcgcaggcgcagctgttcgcggtgctgcgcgaccac
gctgaggccgtgcgccagctgcagggtgtgctcaaggccgacgagctggacgtggaggtg
ctcaagcgcctggtggcggcggggccggcagggccgggcggcgtgggtgccgagctggcg
ggcgccgccatgggcgtcatgtga

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