Chlamydomonas reinhardtii: CHLRE_12g548000v5
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Entry
CHLRE_12g548000v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHLRE_12g548000v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_12g548000v5
Ribosome biogenesis [BR:
cre03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CHLRE_12g548000v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_EF3_N
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
5719616
NCBI-ProteinID:
XP_042919062
UniProt:
A0A2K3D6D3
LinkDB
All DBs
Position
12:complement(8494748..8506113)
Genome browser
AA seq
2536 aa
AA seq
DB search
MASALAQQLQALQKQRQPALAPALKKGKPSLLFDAQKAADVDLQTIYDLSTQGLEELVRL
EPRFRPFRESLFSRASLDINPELQTAEFLSRLDESIGSFCLLLTNHFLAPPAFKALEYLI
RRYKANERNVDALLTAALPYHATNEFVRLVQTLALGPPGSLWGWLAKMQTSGASLPRDLL
AQRAANDKQLLIFICKAAGRLGGGAAATTGAEGAGAAASGGALAGFASRTYLSFYAVVLC
EVLAVLRSVGEEALATLLPHLLAGLGPGAVQDYRAATLMAVAELCSRATLGRDFVKVLLN
TMLKHTEIVSEHIRTALLVMAHMAVTQPHIRTLSDKTLKYLSALPNFVGELAALSQRPNI
RLAPLLQLLCRSMAAALSAASASGGAARRAEADLLALAHGGALRGEPAHALASALLEAGG
AAKAEASVRTSCQKVLRVLDQRYPETTDAAVNAFLEPLREQRRKAAAAAAASAAPADADD
DASKRKKRQKTDGAAKKAASTKKTAAGSDDDEDEEDEAGGTAETAEAAAAALAPEDRARF
EFVRATFAAGGYSAPCGGTMMTLAAALAAPQAAVRRMALQQLDSDLAAPSGSKKGKAAAG
GTAAAEAPEASEARAALTAAALERLRDDDLSVVTAALGLSCLKALPPAALLDALTPLSHK
LGTYLYGAAKLPQLRAARKAARKAAELLGHAGAAAVGSAAVVQAAALQLAALLLPSGRDP
RIAVEAARAAAGMKQHVPIFAGLAAALPELEAAAKGPAADGAAAAGGKSSKGGKKKGASS
EEAAEDGGKKLSKKAQRAAAAAAVARGIVAALAKTVTTDPAARSRELSELVAASAADAAA
GGAAAAAAMRAQQVALLAAHAAAAAASPTTAAAAHTSTPAKASKAASGSSTTMPLLRAAV
GLAEALLPAAAAAAAGVSTSDGLDWFAAFAERVAAADGLPTAALLPALSSDPSGSHEALV
LGSLRANLARLPEAAAAASAAHVDGGSARQVLTHLAALRGGAAALQDLPSLVVTRSVGPG
AARGGFLAAIYAAPSAEASTPVQLKVLALHVQAALVSAGAADVSSWLPTLLVALAAPEAA
VRTAACDVLAPLAQLLSSGKASAGKVMSASSAAALCSGLLAHRAAICRDADATAALLRST
VTGSAAAATPEAASAATPSKRGKAAPKTAADGAAGTTGAPLALSPGATAEVATFLASSLS
EAAADAVGTATALAILACLLSPASPSTAASMTAPPAELFAAASSFLGTVAAALRERPAAA
TAAHAAAVSQVLRLYTPAAAAAHADRVGQLAEVAELLPAAVAATSSAASDALAAARLAAV
SCITPALFATLPPVGNAVRELFAVLLGRYESDPDEAVRAAARASLEAVPLSAQLIIPLLE
PAAAAPPPAAATVAAPTPAKKKSKKADGAAADAAAAPAPPAPTPIDPAALRDAVVALELL
QWRSGITAAATLVPALQALLRRLLPVVGSIATTLRSSAEDEDEAADADQDQAASDAADGG
KSSLAGYAATLTLQALTALAAPAAAVDGGAFDLALAVSAAREAPDAAVRNAALSLLAALA
SRMPEAALSHVLQVLAVVHQSAALADDEHSRAVGATALSAVVPAWVGAGRRPAALWEQVV
GSLPGLPPHRRLDLLLALMRALPQVEQGLSDGLLVMLQHAAAPSATPSTPAAAAAAKTPK
KAGKKGAAAAPETPAGEAGAAPPPSVWLPELASQVALQVELPVRLGCCARVMQLALAESG
RKAHTALPRVVVAFVTAQLKLKVALSAATAAHRRPEADPALETACRSLMTASLAQMQLLQ
PTSTSAPGTAAATTNSRAVLAASRGLYALFGALQGVMAPDAYLQALLTLAEHPADKVKRR
ALKLFTDKVRGVRGEIADQVELPHRVREAKLRQAADAAGRACAMLPPLLAASGDAAASPL
TRQLALVALAAIATEFGQAQAAALLAGVPAVLAATKDSHAAIRASALAAVAAFVRALGPK
LVPVLPSTVAAAVAAADSAWGRLARAGTAADAAMSDADDEDEAAGAVTDSDDEEDGDSDD
EGDGKTQKKRRSKASSDADDAALELSSALASLNALVESLGGFLSPHLAAVLAILLNPRVL
ACRVAGCDQFAASIRSALPGAIPARLLLPALFERLQPCIDAAADCAGAAAAAAPAVALLD
MVGAAAAAMEAKVAAQYADALFNFLLRALDVRQRRPAALVAHSDAAIDAVEAAATRALVA
LTMKLSEARFKPMFLRLLEWASTVSVPEGSAEPSYLGRMVALYGAVNALTDRLRSVLVPY
FRYLLDSAIAHLGGDDGAAAGAARRGKKKQKRASAAAALAEAEAAAAAADGADDQAAAQV
KLAWLLRLRIIRALHRCCLHDTVSFIDAERFARLHPALLSQLEAEPPAAALPLLLSPAHA
DADLSAYLRLGSATRSYTAADGAAATSGPLGAAAVGCLLALAVAANSDALWKPLNHGALM
LTRSSEPRVRALALEVVAQLVDRLREEYLVLLPESLPFLSELLEDVDAGVASRVRQVVTQ
LEEISGEKLDEYLKIA
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagctctcgcgcagcagttgcaggcgctgcagaagcagcgccagccggcattg
gccccggcgctgaagaagggcaagccgtcgctgctgttcgacgcccagaaggcggctgat
gtcgatctacaaacaatctacgatctgtcgacgcaaggtctggaggagctggtccgcttg
gagccgcgctttcgtcccttccgcgagagcctgttcagccgggcctcgttggacatcaac
ccggagctgcagacggccgagttcctgtcgcggcttgacgagtcaatcggcagtttctgc
ctgctgctgacgaaccatttcctggcgccgcccgcctttaaagcactggagtacctaatc
cgccgctacaaggccaacgagcgcaacgtcgacgcgctgctgacggccgcgctgccctac
cacgccaccaacgagttcgtgcggctggtgcagacgctggcgctggggccgcccggcagc
ctgtggggttggctagccaagatgcagaccagcggcgcctcgctgcctcgcgacctactc
gcgcagcgcgctgccaacgacaagcagctcctcatatttatctgcaaggccgcgggccgc
cttggcggcggcgcagccgccaccaccggcgccgaaggtgccggcgccgccgcctccggc
ggcgcgctggctggcttcgccagccgcacctacctgtcgttctacgcggtggtgctgtgc
gaggtgctggcggtgctgcgttctgtgggcgaggaggcgctggcgacgctgctgccgcac
ctgctggcggggctggggccgggcgcggtgcaggactatcgggccgccaccctgatggcg
gtggcggagctgtgcagccgggccacactgggccgcgacttcgtcaaggtgctcctgaac
acgatgctgaagcacacggagattgtgtcggagcacatccgcactgcgctgctcgtgatg
gcgcacatggccgtcacgcagccgcacatccgtaccctctccgacaagacactcaagtac
ctgtcggcgctgcccaactttgtcggcgagctggcggctctctcacagcggcccaacatc
cgcctggcgccgctgctgcagctgctgtgccgctccatggccgccgcactctcggccgcc
agcgccagtggcggcgccgcccgccgggccgaggccgaccttttggcgctggcacacggc
ggcgcgctgcgtggcgagcccgcgcatgcgctggcgagtgcgctgctggaggctggcgga
gctgcgaaggccgaggcgtcggtgcggacgagctgccagaaggtcctgcgggtactggac
caacgctaccccgagaccaccgatgccgccgtcaacgccttcctcgagcctctccgcgag
cagcgccgcaaggcggcagccgccgccgccgcatccgccgcccctgctgacgcggacgac
gacgccagcaagcgcaagaagcgacagaagactgacggcgccgccaagaaggctgcaagc
accaagaagaccgccgccggctccgatgatgacgaggacgaagaggacgaggccggcggc
accgccgagacggccgaggccgccgctgcggcgctggcgccggaggaccgcgcgcgcttc
gagttcgtgcgcgccacctttgcggccggcggctactcggcgccgtgcggcggcaccatg
atgacactggcggcagcgctggcggcgccgcaggcggcggtccgccgcatggcactgcag
cagcttgactctgacttggcggcgccgtcaggctccaagaagggcaaggctgctgctggc
ggcactgctgctgctgaagcaccggaggcctcggaggcgcgcgctgcgctgacggcggcg
gcgctggagcggctgcgcgatgacgacctgagcgtcgtgacggcggccctgggcctgtcg
tgtctcaaggcgctgccgccggccgcgctgctggacgctctgacgccgctgagccacaag
ctcggcacctacctgtacggagccgccaagctgccgcagctgcgcgctgcccgcaaggcg
gcgcgcaaggcggcagagctgctggggcacgcgggcgccgccgccgtgggctctgccgct
gtcgtgcaggcggcggcgctgcagctggcggcgctgctgctgcccagcggccgcgacccc
cgcattgcggtggaggcggcgcgcgccgccgccggtatgaaacagcacgtgccgatcttt
gccggcctggcggcggcgctgccggagttggaagcggctgccaagggcccggctgcggac
ggcgctgccgcggccggcggcaagtcgagcaagggtggcaagaagaagggtgccagctcc
gaggaggccgccgaggacggcggcaagaagttgtctaagaaggcccagcgcgccgccgcc
gccgctgctgtggcacgcggcattgtcgctgccctggccaagactgtcaccaccgacccc
gccgctcgctcgcgtgagctgtcagagctcgtggcggcgtcggcggccgacgccgctgct
ggcggcgcggccgccgccgctgcgatgcgggcccagcaggttgcccttctggctgcgcac
gccgccgctgccgccgccagccccaccaccgccgctgccgcgcacacctctactcctgcc
aaggcgtccaaggccgcaagcggcagcagcaccacaatgccgctgctccgtgctgccgtt
ggcctggcggaggctctgctgcccgccgccgcggcggccgccgccggcgtctctaccagc
gacggcctggactggttcgccgccttcgccgagcgcgttgccgccgccgacggcctgcca
accgccgccctactgcccgcgctttcctccgacccttccggctcccacgaggcccttgtc
ctgggcagcctgcgcgccaacctggctcgcttgccagaggccgccgctgctgcctctgcc
gcgcatgtggacggcggcagtgcccgccaggtgctgactcatctggcggcgctgcgcggt
ggcgccgccgcgctgcaagacctgccgtctctggtcgtcacccgctccgtcggccctggc
gccgctcgtggcggcttcctcgccgccatctacgccgctccctcggccgaggcgtcgaca
ccggtgcagctcaaggtcctggcgctacacgtccaggcggcgctggtgtctgccggcgcc
gctgacgtcagcagctggctgccgacgctgctggtggcgctagcggcgccggaggcggct
gtgcgcaccgccgcctgtgacgtcctggcgccgctggcacagctgctgtcaagcggcaag
gcctctgccggcaaggtgatgtcggcgtcctcggccgcggcactctgcagcggtctcctc
gcacaccgcgccgccatctgccgcgacgccgatgcgacggcggcacttctgcggagcacc
gtgaccggctcggccgccgccgccactcctgaggcagcatctgccgccacgccaagcaag
cgcggcaaggccgcccccaagaccgccgccgacggcgccgctggcaccaccggggcgccg
ctggcgctgagccccggtgccaccgctgaagtggccaccttccttgcgtccagcctctcc
gaggccgcagctgatgccgtcggcaccgccactgcgctcgccatcctcgcgtgcctgctc
tcgccagcttcgccctctaccgccgcgtctatgacggctccgccggccgagctcttcgcc
gctgccagctcattcctgggcacggtggccgcggcgctccgcgagcgccccgccgccgcc
accgccgcccacgccgccgctgtgtctcaggttctccgcctctacacgcccgctgccgcc
gccgcccacgccgaccgcgtcggacagcttgcagaggtcgcagagctactgccggccgcc
gtcgcggctacgtccagcgccgccagtgacgcgctggcggcggctcgcctggccgccgta
agctgcattacgccggcactcttcgccacgctgccgccggtcggcaacgcggtgcgtgag
ctctttgcggtgctgctaggtcgctacgagagcgaccccgacgaggccgtccgcgccgcc
gcccgcgcctcgctggaggccgtgcccctgtcggcgcagctcatcattccgctgctcgag
cccgccgccgccgcgccccctcccgctgccgccaccgttgctgcccccacgcctgccaag
aagaagagcaagaaggctgacggcgcggcggctgacgccgccgccgcacctgcgcctccg
gcgccgactccgattgaccccgcggcgctccgtgacgccgtggttgcgctggagctgctg
cagtggcgctcgggcatcactgcggctgcgacgctggtgccggcgctgcaggcgctgctg
cggcgtctcctgcctgtggtcggcagcattgccacgacgctccgctcctccgcagaggac
gaggacgaggccgccgatgccgaccaggaccaggcggcctccgatgctgctgacggcggc
aagtcctctttggccggctacgccgccacgctgacgctgcaggcgctgacggcactggcg
gcgccggcggcggccgttgacggcggtgcctttgacctggctttggcggtgtcggcggca
cgcgaggctcccgacgcggcggtgcgcaacgcggcgctgtcgctgttggcggcgctggcg
tctcgcatgccggaggcggcgctgtcgcacgtgctgcaggtcttggctgtggtgcaccag
tcggccgcactcgccgacgacgagcacagccgcgcagtgggcgccacggctctgtcggca
gtggtgccggcctgggtgggcgccggccgccggcccgcggcgctgtgggagcaggtggta
ggctcgctgcccggcctgccgccgcaccgccgcctggacttgctgctggccctgatgcga
gctctgcctcaggtcgagcagggtctgtcagacggtctgctggtcatgctgcagcacgcg
gctgctccctccgccaccccctccacccccgccgccgccgctgccgccaagacgccaaag
aaggccggcaagaagggcgccgcagctgcccccgagacgccggctggggaggctggcgct
gcgccgccgccctccgtgtggcttccggagttggcttcgcaggtcgcgctgcaggtggag
ctgcctgtgcgcctgggctgctgcgcgcgtgtgatgcagctggcgctggccgagtccggc
cgcaaggcgcacacggccctgccgcgcgtcgtggtggccttcgtcaccgcacagctcaag
ctcaaggtcgcgctgtccgctgccacggccgcccaccgccgccccgaggccgaccccgcc
ctggagacggcctgccgctccctcatgaccgcctccctggcccagatgcagctgctccag
cccacctccacctcggccccaggcaccgccgcagccaccaccaactcgcgcgccgtgctg
gccgccagccgcggcctgtatgcgctgtttggggcgctgcagggcgtcatggcgcccgac
gcctacctgcaggcgctgctcacgctggctgagcaccccgccgacaaggtcaagcgccgc
gcgctcaagctcttcaccgacaaggtccgcggcgtgcgcggcgagattgccgaccaagtc
gagctgcctcaccgggtgcgggaagccaagctgcggcaggcggctgacgccgccggccgc
gcctgcgccatgctgccgccgctgctggccgccagcggcgacgcggccgcgtcgccgctg
acgcggcagctggcgctggtggccctggcggccatcgctaccgagttcgggcaggcgcag
gcggcggcgctgctggccggcgtgccggcggtgctggcagcgaccaaggactcgcacgcc
gccattcgcgccagtgcgctggcggcggtggcggcgtttgtgcgcgcgcttgggcccaag
ctggtgcctgtgctgccgtcgaccgtggccgccgctgtggcggcggcggactctgcctgg
ggccgcctcgcccgcgccggcacggctgctgacgccgccatgtcggatgcagatgatgag
gacgaggccgctggcgccgtcaccgactcggacgacgaggaggacggagacagcgatgac
gaaggtgacggcaagacgcagaagaagcggaggagcaaggccagcagcgacgccgacgat
gcggcgctggagctgagcagcgccctggccagcctcaacgcgctggtcgagagcctgggc
ggcttcctgtcgccacacctggccgcggtgctggccatcctgctcaacccgcgcgtgctc
gcctgccgcgtggccggctgcgaccagttcgccgccagcatccgctccgccctgcccggc
gccatccccgcgcgcctgcttctgcccgccctctttgagcggctgcagccctgcattgac
gccgccgccgactgcgccggcgccgccgccgcagcggcgcccgccgtggcgctgctggac
atggtgggcgccgccgccgccgccatggaggccaaggtggcggcgcagtacgcggacgcg
ctgttcaacttcctgctgcgcgcgctcgacgtacggcagcgccgcccggcggcgctggtc
gcgcacagcgacgctgcgattgacgccgtggaggccgccgccacccgcgccctcgtggcg
ctgaccatgaagctaagcgaggcccggttcaagcccatgttcctacgcctgctggagtgg
gccagcaccgtgtcggttccggagggcagcgccgagccgtcgtacctgggccgcatggtg
gcgctgtacggcgcggtcaacgcgttgaccgaccggctgcgctccgtactggtgccgtac
ttccggtacctgctggactcggcgatcgcgcacttgggcggcgacgacggcgcagccgcc
ggcgcagcccgccgcggcaagaagaagcagaagcgcgcctccgccgccgccgcgctggcg
gaggctgaggcggcggccgccgctgccgacggcgccgacgaccaggcggcagcgcaggtc
aagctggcgtggctgctgcgcctgcgcatcattcgcgcgctgcaccgctgctgcctgcac
gacaccgtgagcttcatcgacgcggagcgctttgctcgcctgcaccccgcgctgctgtcc
cagctcgaggcggagccgccggcggccgctctgccgctgctgctgtcgcccgcccatgcc
gatgccgacctctccgcctacctgcgcctgggctccgccacgcgctcctacaccgccgcc
gacggcgccgccgccacctcgggcccgctgggcgccgcggccgtgggctgcctgctggcg
ctggcggtcgccgccaacagcgatgcgctgtggaagccgctcaaccacggcgcgcttatg
ctcacgcgcagcagcgagccacgcgtgcgcgcgctggcgctggaggtggtggcgcagctg
gtggaccggctgcgtgaggagtacctggtgctgctgccggagagcctgcccttcctcagc
gagctgctggaggacgtggacgcgggcgtggcgtcgcgggtgcggcaggttgtgacgcag
ctggaggagatcagcggcgagaagctggacgagtatcttaagattgcgtaa
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