KEGG   Chlamydomonas reinhardtii: CHLRE_13g565550v5
Entry
CHLRE_13g565550v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03020  RNA polymerase
cre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CHLRE_13g565550v5
  09124 Replication and repair
   03420 Nucleotide excision repair
    CHLRE_13g565550v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cre03021]
    CHLRE_13g565550v5
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_13g565550v5
Transcription machinery [BR:cre03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     CHLRE_13g565550v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CHLRE_13g565550v5
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L
Other DBs
NCBI-GeneID: 5719044
NCBI-ProteinID: XP_001693682
UniProt: A8HRP7
LinkDB
Position
13:complement(588641..590072)
AA seq 115 aa
MNQPDRYVQFVLPEGERKVKYKADTKLKDAGTFTFRSEDHTIGNLLRMQLHADKSTVFAG
YRIPHPLEPVMVVKVQTNGTKSCEDAMMHALEDLANEYHIMLEEFDQAVSAASMH
NT seq 348 nt   +upstreamnt  +downstreamnt
atgaaccaaccggaccgttacgtacagttcgtgctcccagagggagagcggaaagtcaag
tacaaggcggacaccaagctgaaggatgcgggcacgttcacctttcgctcagaggaccat
accattggcaacctgctgcgcatgcagctgcacgcagacaagtcgaccgtcttcgcgggc
taccggataccccaccccttggagccggtgatggtggtcaaggtgcagaccaacggcacc
aagagctgcgaggacgccatgatgcacgcgctggaggacctggccaatgagtaccacatc
atgctagaggagtttgaccaggctgtgtcggcagccagcatgcactga

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