Chlamydomonas reinhardtii: CHLRE_13g572700v5
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Entry
CHLRE_13g572700v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K19671
WD repeat-containing protein 19
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cre03037
]
CHLRE_13g572700v5
Cilium and associated proteins [BR:
cre03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
CHLRE_13g572700v5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR19_1st
Beta-prop_WDR19_2nd
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
TPR_IF140-IFT172
ANAPC4_WD40
Beta-prop_THOC3
Beta-prop_EML_2
TPR_IFT122
Beta-prop_EML
TPR_COPA_B
Beta-prop_WDR5
WD40_Prp19
TPR_IFT80_172
Clathrin
Beta-prop_WDR35_TULP_N
Beta-prop_WDR3_1st
Beta-prop_HPS5
EIF3I
Beta-prop_IFT140_1st
Beta-prop_ELP1_1st
TPR_7
TPR_GEMI5
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
KNTC1_N
ARM_TT21_C
TPR_WDR35
WDR55
DZR
Zf_2nd_IFT121
HalC8_like_N
Motif
Other DBs
NCBI-GeneID:
5719170
NCBI-ProteinID:
XP_042917372
LinkDB
All DBs
Position
13
Genome browser
AA seq
1367 aa
AA seq
DB search
MKKLFGVGPDLLGDGKVLFEWSPKGNFLAAAGSKRKVNIFDRNGRLYDEVHFPPAEYPNP
DGRACAAAQMQWDPAGEQLAILPAGNTHVFIWLAGNKEVQKIESEFKTQEFSCMAWSRNG
MYLGVATVKGNVMMYNARERKKTPLVGKHTKKIVAAAWNKDNIMALAGQDKTVTLTDGVT
GDTIKTFHLKDVPMDLCVSDKKEDGYSRREENTYSLNINRKTLYIMQCTAEGDRPLELAF
LDTYGPIMKHSWFGDGYILLGYKNGYVAVVSSHSREISEEVHSGKYLDTLTDVTYCASLG
RVAMAGANCVRVLDANADYNEIKGDAVDLDANQAIEKVGWTKDGQVLTVGTHNGYMHSFL
ASLPMVYDFHGTRVLYLTSLLEMTLLDVSRRQTVARIELENEPAFCGLGPSHAAVGMNNQ
AAFYSLGEKVGKVVQRREYLGTITAIKLNETQAAVLTGGHVVVHPISVEAGHAPDELDVV
IPGPGQPANITCVALTPTFVITGSRTGTLSYYLSPDVTPVNEFRHDDGGIVRLFPQATGA
RLVFEDDKGALHLFNPVNDHVVAVPYTGRAETVMWDTSDTNVMVIGDGTALHSFLYVPVS
LTGPQVQDLGKQAVPATHTPLTVCNGVVGCRLKSGAMDNVTLESHKMLQPGDAVARAAPA
KRFAAALKLYKLRDAVECAKQLRQVESWRTLALAALDVLDIDTAINAYREIGDASMVLSL
ERVRQHEDRNLLSAHIMVLLEKDYGQAQELFLRSSVPRAALEMRMDLKHWTDALKLAEQL
DPDAIATICKEHGAMLEMTGEYSNAKSHYQQALDALAVSVGPAQPDLEAACKAGIARTTL
QLGDLRQGRQLAMQLNSQTLFKECALILEGLQQLTEAAEMYERAGQFERAASIYIQTKNF
AAAAPLMARISSSKLQLQFAKAKEAEGRWQEAAAAYEAAGDMDAVVRLCLERLSQPQRAY
AIVRKTQSVEAANQLSRFCLQSQDFGGAVEFLLMAGQMDQAFDIAMGHNEMDTFARIVAA
SAKPVDYQRIAQYYESRGEYDKAADMWSKCDQAPRAVQLYLKVGTNPALEKAVQVVEQTR
SHQLGVLVLDYVNEEKDGTTRDEFRFKLNIAMGQFAEAARDALEMARFEQEEGNYRVAHD
KLFGTVKQLEALNTKPPGELLRALMLLHSYTLVKSLIAINDHTTAARMLVRVARNISKFP
KHIVPILTSTVIECHRANLKKTAFEYASMLMRPEYRDQVAVKYKKKIELMVRKPEKDPEE
LEEPLADCPFCNMPGPETELQCISCQNILPFDLATGKRMVLSDWAECPGCKFPASASQFI
RIISAEGRCPMCNDPVDLAHVRKVQDPLTKIKQQQAQQTNASGGGAS
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctctttggagttggaccggacctcctaggcgacggcaaagtgctcttcgaa
tggagtcccaaggggaatttcctagccgcggcgggcagcaagaggaaggtcaacattttc
gaccggaacgggcgcctctatgacgaggtgcacttcccgcctgcggagtacccgaaccca
gacgggagagcatgcgcagcggcgcaaatgcagtgggaccctgccggcgagcagctggct
atcctgccggcgggcaacacgcatgtatttatttggctggccgggaacaaggaggtgcag
aagatcgagtctgagttcaagacccaggagttctcctgtatggcctggtcgcgcaacggc
atgtacctgggcgtggccacggtgaagggcaacgtcatgatgtacaatgcccgggagcgg
aagaagacgccgctggtgggcaagcacacgaagaagattgtggctgccgcctggaacaag
gacaacatcatggcgctggcggggcaggacaagaccgtcacgctgacggacggcgtcacg
ggcgacaccatcaaaactttccacctcaaggacgtgcccatggacctgtgcgtgtctgac
aagaaggaggacggctactcgcggcgagaggagaacacctactcgctcaacatcaatcgg
aaaacgctgtacatcatgcagtgcactgccgagggcgaccggccgctggagctggcgttc
ctggacacctacggccccatcatgaagcacagctggttcggcgacggctacattctgctg
ggctacaagaacggctacgtggcggtggtgtccagtcacagccgcgagatcagcgaggag
gtgcactccgggaagtacctggacacgttgacggacgtgacctactgcgccagcctgggc
cgcgtggccatggcgggcgccaactgcgtgcgtgtgctggacgccaacgccgactacaac
gagatcaagggcgacgcggtggacctggacgcaaaccaggccatcgagaaggtcggctgg
accaaggacggccaggtgctgacggtgggcacgcacaatggctacatgcattcgttcctg
gcctcgctacccatggtgtacgacttccacggcacccgcgtgctgtacctgaccagcttg
ctggagatgacgctgctggacgtgagccggcgccagaccgtggcgcgcattgagctggag
aacgagccggcgttctgcgggctgggcccctcacacgcggcggtgggcatgaacaaccag
gccgcgttctacagcctgggcgagaaggtgggcaaggtggtgcagcggcgcgagtacctg
ggcaccatcaccgccatcaagctcaacgagacgcaggctgcggtgctgacgggcggccac
gtggtggtgcaccccatcagcgtggaggcgggccacgcccccgacgagctggacgtggtc
atcccgggccccggccagcccgccaacatcacgtgcgtggcgctcacgcccaccttcgtc
atcaccggcagccgcaccggcacgctgtcgtactacctcagcccggacgtgacgcctgtc
aacgagttccgccacgacgacggcggcatcgtgcggctgttccctcaggccacgggcgcg
cggctggtgttcgaggacgacaagggcgcgctgcacctgttcaaccccgtgaacgaccac
gtggtggccgtgccgtacaccggccgcgccgagacggtgatgtgggacacgtccgacacc
aacgtcatggtcattggcgacggcaccgcgctgcactccttcctctacgtgcccgtcagc
ctgacgggcccgcaggtgcaggacctgggcaagcaggcggtgccggccacccacacgccg
ctaacggtgtgcaacggggtggtgggctgccgcctcaagtccggcgccatggacaatgtg
acgctggagagccacaagatgctgcagcccggcgacgccgtggcgcgcgctgcgcccgcc
aagcgcttcgcggcggcactcaagctgtacaagctgcgcgacgcggtggagtgcgccaag
cagctgcggcaggttgaatcgtggcgcacgctggctctggcggctctggacgtgttggac
atcgacaccgccatcaacgcctaccgcgagatcggcgacgccagcatggtgctgtcgctg
gagcgcgtgcgccaacacgaggaccgcaacctgctgtccgcgcacatcatggtgcttctg
gagaaggactacggccaggcgcaggagctgttcttgcgatcctcggtgccgcgcgcggcg
ctggagatgcgcatggatctgaagcactggacggacgcgctcaagctggcggagcagctg
gaccccgacgccatcgccaccatctgcaaggagcatggagccatgctggagatgacgggc
gagtacagtaacgccaagtcgcactaccagcaggcgctggacgcgctggcggtgagcgtg
ggcccggcgcagcccgatctggaggcggcgtgcaaggccggcatcgcgcgcaccacgctg
cagctgggcgacctgcgccagggccgccagctggccatgcagctcaactcgcagacgctg
ttcaaggagtgcgccctcatcctggagggcctgcagcagctcacggaggcggccgagatg
tacgagcgggctggccagttcgagcgcgccgccagcatctacatccagaccaagaacttc
gccgcggccgcgccgctcatggcccgcatcagctcctccaagctgcagctgcagttcgcc
aaggccaaggaggccgagggccgctggcaggaggccgccgccgcctacgaggccgccggc
gacatggacgcggtggtgcggctgtgcctggagcggctgagccaaccgcagcgcgcctac
gccattgtgcgcaagacgcagagcgtggaggccgccaaccagctcagccgcttctgcctg
cagagccaggactttggcggcgccgtggagttcctgctcatggcgggccagatggaccag
gcgttcgacatcgcgatggggcacaacgagatggacacgtttgcgcgcatcgtggcggcg
tccgccaagcccgtggactaccagcgcatcgcgcagtactacgagagccgcggcgagtac
gacaaggcggcggacatgtggagcaagtgcgaccaggcgccgcgcgccgtgcagctgtac
ctcaaggtgggcacgaacccggctctggagaaggcggtgcaggtggtggagcagacgcgc
agccaccagctaggcgtgctggtgctggactacgtgaacgaggagaaggacggcaccacg
cgcgacgagttccgcttcaagctcaacatcgccatgggccagttcgcggaggcggcgcgc
gatgcgctggagatggcgcgcttcgagcaggaggagggcaactacagggtggcccacgac
aagctgttcggcacggtgaagcagctggaggcgctcaacaccaagccgcccggcgagctg
ctgcgcgcgctcatgctgctgcacagctacacgctggtcaagtcgctcatcgccatcaac
gaccacaccaccgcggcgcgtatgctcgtgcgcgtggcgcgcaacatctcgaagttcccc
aagcacatcgtgcccatcctcacctccaccgtcatcgagtgccaccgcgccaacctcaag
aagacggccttcgagtatgcgtccatgctcatgcggcccgagtacagggaccaggtggcg
gtcaagtacaagaagaagatcgagctcatggtgcggaagccggagaaggaccccgaggag
ctggaggagccgctggcggactgccccttctgcaacatgcccggccccgagaccgagctg
cagtgcatcagctgccagaacatcctgcccttcgacctcgccaccggcaagcgcatggtt
ctgtcggactgggcggagtgcccgggctgcaagttccccgcttcggcctcgcagttcatc
cgcatcatcagcgccgagggccgctgccccatgtgcaacgaccccgtggacctggcgcac
gtgcgcaaggtgcaggacccgctcaccaagatcaagcagcagcaggcgcagcagaccaac
gcctcaggtggcggcgcgtcgtaa
DBGET
integrated database retrieval system