Chlamydomonas reinhardtii: CHLRE_13g574200v5
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Entry
CHLRE_13g574200v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHLRE_13g574200v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_13g574200v5
03016 Transfer RNA biogenesis [BR:
cre03016
]
CHLRE_13g574200v5
Enzymes [BR:
cre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CHLRE_13g574200v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
CHLRE_13g574200v5
Transfer RNA biogenesis [BR:
cre03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
CHLRE_13g574200v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
NTP_transf_2
PAP_assoc
Polbeta
DncV_C
TraH
Motif
Other DBs
NCBI-GeneID:
5719203
NCBI-ProteinID:
XP_042917398
UniProt:
A0A2K3CZW0
LinkDB
All DBs
Position
13:1686831..1691746
Genome browser
AA seq
672 aa
AA seq
DB search
MLPAAAALHSSAMVPSSAAVAPVRLACPTPARSLAPARGPPSSGHCWSSPPAAPAHSGAS
WQQAEMLPGLLRLHVGAAACSRSSALVPAAACCSASWGDGAWSSPVVAAAASSPGSDTSS
CCSTSAASSSAPRTASVRLPRSAGVWLGARAHAAHHRVSVAAPAILGGNRHASMSPLVSG
PAAVSASPSGLPGPSLLPRQGAGLRCLATNVRAGSAPEQQSSAQPLSKKQQKAAAAAAKQ
AAVAQAGGSNGQEAGAADGVPAPVVPPQPSVRYSPLHYNIEEFCQRVVPTEGERRQRQEV
IEAVRGGVRRVWPGARGVELQVFGSFANGLSTWNSDLDLVVTGIYEPDRMTGGYEINDRG
RITAKLRKIAEALNRSKAIDIERQQLIPRARIPILKLWTKARVTVDVSMSDDSGPRAARY
MAQQCRAYPPLKPLVLVLKAYLKACRLNEVNSGGLSSYSLTNMVIAHLQEELKSGHDVSD
LGETLYTFLLRFGEEHDYSSQAVSVASGGIVPKMSLGFAMESARQAAVTMGSYDGAVSWN
ERLCVDCPLTGRDVSNGTFRIDLVRGAFVQAARKLEALARGRRISDTSLNYLQALFDVNR
VLKRQYDPYEPYEDEYLKVIRNSDDEDMPEDDLLVGAGATGDEDDADEQGDYMERRSPAP
ATPSSQQSGRRR
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgctgccagctgcagcagccttgcactcttcggcgatggtacccagcagtgctgccgtt
gccccagtccggcttgcgtgccctacacctgcgcggtcactggcgcctgctcggggacct
ccgtcatccgggcactgctggagcagccctccggccgcaccggcacattccggcgctagc
tggcagcaggcggagatgctgccaggactgctgcgcttgcacgtgggggctgcagcgtgc
agccggtcttccgcccttgtgccggccgcagcgtgctgctccgcatcttggggtgatggt
gcctggagctcacccgtagtggctgccgcagcctcctcccctggatcggacacaagcagc
tgctgctccacatccgcagcttcatcgtcggccccgcggacagcttctgtgcgcctgccg
cgcagtgcgggggtgtggctgggcgcccgcgcgcacgccgcacatcaccgagtctcggtg
gccgcaccggcgattttaggtggcaaccgacacgcatccatgtcgccacttgtgtccgga
ccggcggctgtctcagcttcgccaagcggcctgcctggcccctcgctcttgccgcggcaa
ggcgctgggctccgctgcctcgcaacgaacgtgcgcgccggttctgcaccggagcagcag
tcttcggcgcagccattgtcgaagaagcagcagaaggcggctgccgctgcggcgaagcag
gcggcggtggcacaagcgggtgggagtaacgggcaagaggcgggcgcggcggacggcgtg
ccggcacccgtggtgccgccgcagccgagcgtgcggtactcgccgcttcactacaacatc
gaggagttctgccagcgggtggtgccaacggagggcgagcggcgacagcgtcaggaggtc
atcgaggcagtgcgtggcggcgtgcggcgcgtgtggcctggcgcccgcggtgtggagctg
caggtgtttggctcctttgccaacgggctgtccacgtggaacagcgacctggacttggtg
gtgaccggcatctacgagccggaccgcatgacgggaggctacgagatcaatgaccgcggc
cgcatcacggccaagctgcgcaagattgcggaggcactgaaccgcagcaaggccatcgac
atcgagcgccagcagctcatcccgcgggcgcgcattcccatcctcaagctgtggaccaag
gcgcgtgtgacggtggacgtgagcatgagtgatgacagcgggccccgcgccgcgcgctac
atggcgcagcagtgccgcgcctacccacccctcaagccgctggtgctggtgctgaaggcg
tacctcaaggcctgccgcctgaatgaagttaactccggcggcctttcctcctacagcctc
accaacatggtcatcgcgcacctgcaggaggagctcaagtcgggccacgacgtgagcgac
ctgggtgagacgctgtacaccttcctgctgcggttcggcgaggagcacgactacagctcc
caggcggtgtcggtggccagcggcggcatcgtgcccaagatgtctctgggcttcgccatg
gagagcgctcgtcaggccgctgtcaccatgggctcctacgatggcgccgtcagctggaac
gagcgcctgtgcgtggactgcccgctgacaggccgtgacgtgagcaacggcacgtttcgc
atcgacctggtgcgcggcgctttcgtgcaggcggcgcgcaagctggaggcgctggcccgc
gggcgccgcatcagcgacacctcgctcaactacctgcaggcgctgttcgacgtgaaccgg
gtgcttaagcggcagtacgacccctacgagccgtacgaggacgagtacctcaaggtcatt
cgcaacagcgacgacgaggacatgccagaggatgacctgttggtcggggccggcgccacg
ggtgacgaggacgacgccgatgagcagggggactacatggagcgccgctcgcccgcgccg
gccacgccaagcagccagcagagcggccggcgccggtga
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