KEGG   Chlamydomonas reinhardtii: CHLRE_13g574200v5
Entry
CHLRE_13g574200v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLRE_13g574200v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cre03019]
    CHLRE_13g574200v5
   03016 Transfer RNA biogenesis [BR:cre03016]
    CHLRE_13g574200v5
Enzymes [BR:cre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     CHLRE_13g574200v5
Messenger RNA biogenesis [BR:cre03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     CHLRE_13g574200v5
Transfer RNA biogenesis [BR:cre03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    CHLRE_13g574200v5
SSDB
Motif
Pfam: MTPAP-like_central NTP_transf_2 PAP_assoc Polbeta DncV_C TraH
Other DBs
NCBI-GeneID: 5719203
NCBI-ProteinID: XP_042917398
UniProt: A0A2K3CZW0
LinkDB
Position
13:1686831..1691746
AA seq 672 aa
MLPAAAALHSSAMVPSSAAVAPVRLACPTPARSLAPARGPPSSGHCWSSPPAAPAHSGAS
WQQAEMLPGLLRLHVGAAACSRSSALVPAAACCSASWGDGAWSSPVVAAAASSPGSDTSS
CCSTSAASSSAPRTASVRLPRSAGVWLGARAHAAHHRVSVAAPAILGGNRHASMSPLVSG
PAAVSASPSGLPGPSLLPRQGAGLRCLATNVRAGSAPEQQSSAQPLSKKQQKAAAAAAKQ
AAVAQAGGSNGQEAGAADGVPAPVVPPQPSVRYSPLHYNIEEFCQRVVPTEGERRQRQEV
IEAVRGGVRRVWPGARGVELQVFGSFANGLSTWNSDLDLVVTGIYEPDRMTGGYEINDRG
RITAKLRKIAEALNRSKAIDIERQQLIPRARIPILKLWTKARVTVDVSMSDDSGPRAARY
MAQQCRAYPPLKPLVLVLKAYLKACRLNEVNSGGLSSYSLTNMVIAHLQEELKSGHDVSD
LGETLYTFLLRFGEEHDYSSQAVSVASGGIVPKMSLGFAMESARQAAVTMGSYDGAVSWN
ERLCVDCPLTGRDVSNGTFRIDLVRGAFVQAARKLEALARGRRISDTSLNYLQALFDVNR
VLKRQYDPYEPYEDEYLKVIRNSDDEDMPEDDLLVGAGATGDEDDADEQGDYMERRSPAP
ATPSSQQSGRRR
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgctgccagctgcagcagccttgcactcttcggcgatggtacccagcagtgctgccgtt
gccccagtccggcttgcgtgccctacacctgcgcggtcactggcgcctgctcggggacct
ccgtcatccgggcactgctggagcagccctccggccgcaccggcacattccggcgctagc
tggcagcaggcggagatgctgccaggactgctgcgcttgcacgtgggggctgcagcgtgc
agccggtcttccgcccttgtgccggccgcagcgtgctgctccgcatcttggggtgatggt
gcctggagctcacccgtagtggctgccgcagcctcctcccctggatcggacacaagcagc
tgctgctccacatccgcagcttcatcgtcggccccgcggacagcttctgtgcgcctgccg
cgcagtgcgggggtgtggctgggcgcccgcgcgcacgccgcacatcaccgagtctcggtg
gccgcaccggcgattttaggtggcaaccgacacgcatccatgtcgccacttgtgtccgga
ccggcggctgtctcagcttcgccaagcggcctgcctggcccctcgctcttgccgcggcaa
ggcgctgggctccgctgcctcgcaacgaacgtgcgcgccggttctgcaccggagcagcag
tcttcggcgcagccattgtcgaagaagcagcagaaggcggctgccgctgcggcgaagcag
gcggcggtggcacaagcgggtgggagtaacgggcaagaggcgggcgcggcggacggcgtg
ccggcacccgtggtgccgccgcagccgagcgtgcggtactcgccgcttcactacaacatc
gaggagttctgccagcgggtggtgccaacggagggcgagcggcgacagcgtcaggaggtc
atcgaggcagtgcgtggcggcgtgcggcgcgtgtggcctggcgcccgcggtgtggagctg
caggtgtttggctcctttgccaacgggctgtccacgtggaacagcgacctggacttggtg
gtgaccggcatctacgagccggaccgcatgacgggaggctacgagatcaatgaccgcggc
cgcatcacggccaagctgcgcaagattgcggaggcactgaaccgcagcaaggccatcgac
atcgagcgccagcagctcatcccgcgggcgcgcattcccatcctcaagctgtggaccaag
gcgcgtgtgacggtggacgtgagcatgagtgatgacagcgggccccgcgccgcgcgctac
atggcgcagcagtgccgcgcctacccacccctcaagccgctggtgctggtgctgaaggcg
tacctcaaggcctgccgcctgaatgaagttaactccggcggcctttcctcctacagcctc
accaacatggtcatcgcgcacctgcaggaggagctcaagtcgggccacgacgtgagcgac
ctgggtgagacgctgtacaccttcctgctgcggttcggcgaggagcacgactacagctcc
caggcggtgtcggtggccagcggcggcatcgtgcccaagatgtctctgggcttcgccatg
gagagcgctcgtcaggccgctgtcaccatgggctcctacgatggcgccgtcagctggaac
gagcgcctgtgcgtggactgcccgctgacaggccgtgacgtgagcaacggcacgtttcgc
atcgacctggtgcgcggcgctttcgtgcaggcggcgcgcaagctggaggcgctggcccgc
gggcgccgcatcagcgacacctcgctcaactacctgcaggcgctgttcgacgtgaaccgg
gtgcttaagcggcagtacgacccctacgagccgtacgaggacgagtacctcaaggtcatt
cgcaacagcgacgacgaggacatgccagaggatgacctgttggtcggggccggcgccacg
ggtgacgaggacgacgccgatgagcagggggactacatggagcgccgctcgcccgcgccg
gccacgccaagcagccagcagagcggccggcgccggtga

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