Chlamydomonas reinhardtii: CHLRE_13g575900v5
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Entry
CHLRE_13g575900v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K27103
serrate RNA effector molecule
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_13g575900v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
CHLRE_13g575900v5
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
5719231
NCBI-ProteinID:
XP_042917431
UniProt:
A0A2K3D001
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Position
13:complement(1896142..1901577)
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AA seq
673 aa
AA seq
DB search
MYGRDHRGPPPPPPRGGGGPGGDWGGDRGYRGEDRRRPRSPPPHMHERDRYNRGRSPPPS
GKRMRRDGPYDGRDYDAPYNGRGSPDYDRRPPSPRHDDREMFERRASVGRDRPEEEKRPM
TFKEFMLHKVPDDAAPDVAHRMFQEYLVEYYGSAIKAEFEQNKDSDMFKYQFDPRNFAKV
VASRAEEAQDSAKHVAADLASGTLDPAHEAFAQGMYDLAPKIEKPADKPAAAPKEGEKAA
PPPAEDAGPKFAPNTCWSAERVAHDLELSRRLIRKLDAEKSIAENPLLPKLATAPSLGDA
GKDGGEDGDKPEAGAKPEGGADGEGGAAEAGEGAAAAAAPEAAAPEAEPPIVVDDSNYQE
SVGKLDLQLHWLWKVHGVDYYAGIELNEQDWPYRLNCCRLIRGPKPEEGEGEDEATAKAD
REKLGRQVDETWNRRISLGDPIEAKCMKARIEDELDKWIESQVTMVADNKWGSKLSNKLF
VGKKYVIKHIKTKHQDKLAVERERILDQLYFDNFRQWKEDEERRRVEEEQHAGEGAPEGE
GAVVESESGYAGRGRGRGGMGMRGRGRMGRGMMGRGPMMGMEGPLMMPMPMAPMFMPPGP
MGPFMPILPGPMPLMPPGPMPLRGRGPMRGRGRGMGPGRGMGGPPKLDPRGMREYFDLDH
PANNRAVLDYGDL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtagagatcataggggcccgcctcccccgcccccgcgcggtggcggtggacca
ggcggagactggggaggagacagaggctatcgcggagaggaccggcgccggcctcgtagc
ccgccgcctcacatgcacgagcgtgatcgatacaaccgtggtcgcagcccaccgccgtcc
ggaaagcgcatgcgccgcgacggaccctacgacggccgcgactacgacgcaccctacaac
gggcgaggcagcccggactatgaccgccggcctccctcgccgaggcacgatgaccgagag
atgtttgagcggcgcgcgtcggtggggcgtgacaggcccgaagaggagaagcgtcccatg
acctttaaggagtttatgctgcacaaggtgccggacgacgccgcgcccgacgtggcgcac
cgcatgttccaggagtacctggtggagtattacggcagcgccatcaaggccgagttcgag
cagaacaaggacagcgacatgttcaagtaccagttcgacccgcgcaacttcgccaaggtg
gtggccagccgcgcggaggaggcgcaggacagcgccaagcacgtggccgcggatctggcc
tcgggcaccctggaccccgcacacgaggccttcgcccagggcatgtacgaccttgccccc
aagattgagaagccagcggacaagccagcggcggcgcccaaggagggcgagaaggcggcg
ccgccaccggcagaagacgcggggcccaagttcgcgcccaacacctgctggagcgcggag
cgagtggcgcacgacctggagctcagccgccggctcatccgcaagctggatgccgagaaa
agcattgcggagaacccgctgctgcccaagctggcgacggcgccctccctgggcgacgct
ggcaaggacggcggcgaggacggcgacaagcctgaggccggcgccaagcctgagggcggt
gcagatggcgaaggcggcgcggcggaggctggcgagggcgctgccgcagcggctgcaccg
gaggcggcagcgccggaggcggagccgcccatcgtggtggatgactcgaactaccaggag
agcgtgggcaagctggacctgcagctgcactggctgtggaaggtgcacggcgtggactac
tacgccggcattgagctgaacgagcaggactggccgtaccgcctgaactgctgccgcctc
atccgcggccccaagcctgaggagggtgagggcgaggacgaggcgacggccaaggccgac
cgcgagaagctgggccggcaggtggacgagacgtggaaccgccgcatctcgctgggtgac
cccatcgaggccaagtgcatgaaggcgcggattgaggacgagctggacaaatggatcgag
tcgcaggtcaccatggtcgccgataacaagtggggctctaagctgagcaacaagctgttt
gtgggcaagaagtatgtgatcaagcacatcaagaccaagcaccaggacaagctggccgtc
gagcgcgagcggatcctggaccagctctacttcgacaacttccgccagtggaaggaggac
gaggagcgccgccgtgtggaggaggagcagcacgcgggcgagggggcgccggagggcgag
ggcgcggtggtggagagcgagagcggctacgccggccgcggccgcgggcggggcggcatg
gggatgcgcggccgcgggcgcatgggtcgcggcatgatgggccgcggccccatgatgggc
atggaggggcccctcatgatgcccatgcccatggcccccatgtttatgccgccaggcccc
atgggccccttcatgcccatcctgcccggccccatgcccctgatgccgcccggccccatg
cccctgcgcggccgcggccccatgcgcggccgcgggcgcggcatgggtcccggccgcggc
atgggcgggccgcccaagctggacccccgcggaatgcgcgagtactttgacctggaccac
cccgccaacaaccgcgcggtgctggactacggagacctgtag
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