KEGG   Chlamydomonas reinhardtii: CHLRE_13g583250v5
Entry
CHLRE_13g583250v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K15361  WD repeat-containing protein 48
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    CHLRE_13g583250v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_13g583250v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     CHLRE_13g583250v5
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML_2 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_DCAF12 Beta-prop_EML Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_SCAP WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_VPS8 WD_LRWD1 Beta-prop_HPS5 WD40_like
Other DBs
NCBI-GeneID: 5719354
NCBI-ProteinID: XP_042917587
UniProt: A0A2K3D0I6
LinkDB
Position
13:2840074..2852139
AA seq 814 aa
MYSNGVPPRRKERKVQVVFPHPDVEKHCAGVESLLLPSVPNHKLLFTASRDSTVRRWDVA
GPEPVLEAVFAGHADWVNDLALIGDLLITCSNDQTVRLWKAGSDNGQHLHTLSYHSDYVT
CLAAAPARSLVVSAGLRAEIFLLNIETGKHSQLYPGSSSTTGSGGGGGGHSEDGHGGAGA
ASATSPTASVSPHGGGGGGGGCFSPHAAGPGHLGGLGGNTPVGGHGAGGGLGGMGAGGGG
GGGGEKDQPGSVYALALNPAGTLIAAGTSEALVRLLDPRTGRKITKLRGHQDTVRALLVN
ADGSTIISGASDGTIKLWDVGMQRCVQTYNLHSDSVWSLLSPDDSFATIYSAGRDGALYR
TRTQHRTSELLAVEDRPVTALALDPEGEPLGPGGVPSVAVWTSTPASSVHKWLVPRDPGS
AAAAGGDGGRSFSVSSRTHGLSSHMRNRMSLEANRQPLVRSPAAVIAGVPALEAHEVLAD
RRHVLTRDSRGHVELWDVLTGAKVQSYGKVDMDAKRRELWEARSVPAWFSADTRLGCLCI
SLEPGSAFAAEEYAQQLEYSGVPDDCKVNYGKLVLDCVFAKWRYKLAAGMSAGAPPPPPP
GHLFPLPGPDGSLPPPAPGTSAYYPDIWPKYWQVGALPAVMCSRHDGQRWRRLINAFDGG
EAEPGEVPTWVGDVVLRGANVTPKEAKCAFVLLPMEGSNLPSLMQSKLNAPRILQVHKVA
HYCCSKLQELNIALEVRPIYLRRPPAAAPDLADEPGVPPRPVLELTCNGVLVPFEMSLAT
VKKFIWKKSDDLIFNYKIRDPAHPAPMPQLAPSS
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgtactcgaacggagtccctccgcggagaaaggagaggaaggtgcaagtggtctttccg
cacccggatgttgaaaagcactgcgctggcgtggagtcgctgctccttccctccgtaccc
aaccataaactcttgttcacagcatctcgcgactccaccgtccggagatgggacgtggcg
ggtccggagccggtgctggaggcggtgtttgctggccacgccgactgggtgaatgacctg
gcgctcattggggacctgctcatcacctgtagcaatgaccagaccgtgcggctgtggaag
gccggcagcgacaacggccagcacctgcacacgctgtcgtaccactcggactacgtcacc
tgcctggcggccgcgccggcgcgcagcctggtggtgtcggcgggactgcgggccgagata
ttcctgctcaacatagagacgggcaagcactcgcaactctacccgggctcctcctcaacc
accggcagcggcggcggcggcggcggacacagcgaagacggccacggcggcgccggcgcc
gcctccgccaccagccccaccgccagcgtctccccgcatggcggcggcggcggcggcggc
ggctgcttcagcccacacgcggccggaccgggtcacttgggtggtttgggcggcaacacg
ccggtcggcgggcacggcgccggcggcggcttgggcgggatgggcgcgggcggcgggggc
gggggcggtggggagaaggaccaacccggcagtgtgtatgcgctggcgctgaatccggcc
ggcacgctgattgccgcgggcaccagcgaggcgctggtgcggctgctggacccgcgcaca
ggcaggaagatcacaaagctgagggggcaccaggacactgtgcgggcgctgctggtgaac
gccgacggcagcaccatcatcagcggcgccagcgacggcaccatcaagctgtgggacgtg
ggcatgcagcgctgcgtgcagacctataacctacacagcgacagtgtgtggtcgctgctg
tcccccgacgactccttcgccaccatctacagcgccggaagggacggggcgctgtaccgc
acacgcacacagcaccgcacctctgagttgttggctgtggaggaccggcccgttaccgcc
ctggcgctggacccggagggggagccgctgggccccggcggtgtgcccagtgtggcggtg
tggacctccacgcccgcctcctccgtgcacaagtggctggtgccgcgcgacccgggctcg
gcggcggcggcgggcggcgacggcgggcgcagcttctcggtgtcctcccgcacgcacggc
ctgagctcccacatgcgcaaccgcatgtccctggaggccaaccgccagccactggtgcgc
agccccgcagcggtcattgccggagtgccagcgctggaggctcacgaggtgctggcggac
cggcgccacgtgctcacacgcgacagccgcggccacgtggagctgtgggacgtgctcacc
ggggccaaggtccagtcgtacggcaaggtggacatggacgccaagcgtcgcgagctgtgg
gaggcgcgctccgtgcccgcctggttctccgccgacacgcggctgggctgcctgtgcatc
agcctggagccgggcagcgccttcgcggcggaggagtacgcgcagcagctcgagtacagc
ggcgtgccggacgactgcaaggtcaactacggcaagctggtcctggactgcgttttcgcc
aagtggaggtacaagctggcggcgggcatgtctgccggcgcgccgcccccgccgccaccg
ggccacctgttcccgctgcccggccccgacggctccctgccgccgccggcccccggcacc
tccgcctactaccccgacatatggcccaagtactggcaggtcggggcgttgcccgcggtc
atgtgctcgcggcacgacggccagcgctggcggcggctgatcaacgcctttgacggcgga
gaggcggagccgggcgaggtgcccacgtgggtgggtgacgtggtgcttcgcggcgccaat
gtgacgcccaaggaagccaagtgcgccttcgtgctactgcccatggagggctccaacctg
ccaagcctcatgcagtccaaactcaacgcgccgcgcatcctgcaggtgcacaaagtggcg
cactactgctgcagcaagttgcaggagttgaacatcgcgctggaggtgcgccccatctac
ctgcgccgcccgccggccgccgcgcccgaccttgcggacgagccgggtgtgccgccgcgg
ccggtgctggagctgacatgcaacggcgtgctggtgccatttgagatgagtctggccacc
gtgaagaagttcatttggaagaagagcgacgacctcatcttcaactacaagattcgggac
ccggcgcaccccgcgcccatgccccagctcgcacccagcagctga

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