Chlamydomonas reinhardtii: CHLRE_13g591501v5
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Entry
CHLRE_13g591501v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cre03016
]
CHLRE_13g591501v5
Enzymes [BR:
cre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CHLRE_13g591501v5
Transfer RNA biogenesis [BR:
cre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHLRE_13g591501v5
Prokaryotic type
CHLRE_13g591501v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
5718650
NCBI-ProteinID:
XP_042917747
UniProt:
A0A2K3D160
LinkDB
All DBs
Position
13:4099666..4105087
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AA seq
557 aa
AA seq
DB search
MLRCGRGCLRQACGRGRSGAARSTPVLRGSLCVQWRGHGPVPSLAAAAGVPAIHRVQQCS
KHHSHGRVGPLAVRREDRCQLALGRVLHPGGVGAHHTGSAAASGNSSSSSSGRCCRASTA
AAAAATAGREACWSGRNSVGDGWPQSRQVRVAADSSCGCSSSAASSSGSSSSSRHGGAVG
SSTRQQQGRGQWVAARGSSTAAAPAAATATAGGSPPADAAAAATSPSPPPVVSPATSAQA
AISFSRETAEGLGRLGKLSYRLILAYDGTDYCGWQLQPAAPTVQAKLEAALGTVLREDRG
VLGVRAAGRTDSGVHARGQVVQFNCDRELPVDKLAYKLNAVLPPDIRVMGVRRTAPDFSV
TCSPIGKTYHYNITNSEAHDPLRHRYAYHVRKPLDLAGMRAAAALLVGTHDFTQFSNIGE
EGGRPRKRNPVKTLRRMDVVELDPAAFPGGVRIEVEGNGFLYKMVRHISGVLVAVGERKL
PPGIVSEMLEVGDNAPPGRHGTYRGYNVAPARGLTLHEVMYDPRVDDPTVLLYPELRHDE
HGRLLESIPDALRSDEE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggtgcgggcgcggctgtctgcggcaagcttgcgggcgcggcaggagcggcgct
gctcgctcgactcctgtgctacgtggctctctttgcgtgcaatggcgcgggcatgggcct
gtacctagcctcgctgcagcggcaggcgtccctgcgatccaccgtgtacagcaatgcagc
aaacatcatagccacgggcgtgttgggccgcttgctgtacggagagaggataggtgccag
ctggctcttgggcgtgtgctgcatcctggtggggttggtgctcatcacacaggcagcgcc
gccgccagcggcaatagcagcagtagcagcagcggccgctgctgccgcgccagcacagcc
gcagcagcagcagcaaccgcaggccgggaagcatgctggtcagggcgcaacagcgtcggg
gatggatggccgcaaagccggcaagtcagagtagcggctgacagctcctgcggctgcagc
agtagcgccgccagcagcagtggcagcagtagcagcagcaggcatgggggagctgttggc
agtagcacgcgacagcagcaggggcgagggcagtgggtcgctgcgcggggctcctccaca
gcggctgcgcctgccgccgcaaccgcaacagcgggcggctctccgccggcggacgccgca
gctgccgccacctccccctcacccccgcccgtcgtgtcgcctgctacgtccgcccaggcc
gcgatcagcttcagccgcgagaccgccgaggggctaggccggctgggcaagctgagctac
cggctcatcctggcctacgacggcaccgactactgcggctggcagctgcagccggcggcg
cccaccgtgcaggcaaagctggaggcggcgctgggcacggtgctgcgtgaggatcgcgga
gtgctgggtgtgcgggcggcggggcggaccgactcgggcgtgcacgcgcgcggccaggtg
gtccagttcaactgcgaccgcgagctgccggtggacaagctggcctacaagctgaacgcc
gtgctaccgcccgacatacgcgtgatgggggtgcggcgcacggcgcccgatttcagcgtc
acgtgcagccccatcggcaagacgtaccactacaacatcaccaactcggaggcgcacgac
ccgctgcggcaccgctacgcctaccacgtgcgcaagccgctggacctggccggtatgcgg
gcggcggcggcgctgctggtgggaacacacgacttcacgcagttcagcaacattggcgag
gagggcgggcggccccgcaaacgcaacccggtcaagacgctgcggcgaatggatgtggtg
gagctggaccccgcggccttcccggggggagtgcgcatcgaggtggagggcaacggtttc
ctgtacaagatggtgcgccacatctccggcgtgctggtggcggtgggcgagcgcaagctg
ccgccgggcattgtgtcggagatgctggaggtcggggacaacgcgccgccgggccggcac
ggcacgtaccgtggctacaacgtggcgcccgcccgcggcctgaccctgcacgaggtgatg
tacgacccgcgggtggacgaccccacggttttgctgtaccccgagctccggcacgacgag
cacggccggctgctggagtccatcccggatgcgctgcggtcggatgaggagtag
DBGET
integrated database retrieval system
