Chlamydomonas reinhardtii: CHLRE_14g624500v5
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Entry
CHLRE_14g624500v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12590
exosome complex component RRP46
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHLRE_14g624500v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_14g624500v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CHLRE_14g624500v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
5718307
NCBI-ProteinID:
XP_001692824
UniProt:
A0A2K3CY88
LinkDB
All DBs
Position
14:2413363..2415832
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AA seq
263 aa
AA seq
DB search
MDLDKAGPGPGSARSRGRLPAQLRTLVCERAVLDRADGSAKWTQEGSSVLAAVYGPRQAK
LQKEDAERAVVEVVFKPRAGLQGHEDRSLELEIRGILEGVIPLGMFPRTSVMVVLQVLQD
DGGALSCALNAAAAALVDAGVPLNSMFSSVSCVLTSDRRLVLDPDALEEQAAAARFCFTY
PHHFDLTTAVPAAATGATTASPGADDASATAVVGESVLGSRCVGAFSGDELLDAAALCRR
GCERVATFARLSLAKSLQAAGGA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggacttggacaaggccgggccaggaccagggtctgcgcgctcgaggggtcggctgccg
gcgcagttgaggacgctcgtgtgcgaaagggcagtgctggaccgagcggatggttccgcc
aagtggacgcaggagggcagcagcgtgctggccgcggtgtatgggccacggcaagcaaag
ctacagaaggaggacgcggaaagggccgtcgtagaagtggtcttcaagccccgggcgggg
ttacaaggccacgaggaccggtcgttagagctcgaaattcgcggcatcctggagggcgtt
atcccgctgggcatgttcccccgcaccagcgtaatggtagtgctgcaggtgctccaggat
gacggcggggcgctatcgtgcgcgctcaatgcggcagcggcagcgctggtggacgcgggc
gtgcccctcaactccatgttctcctcggtcagctgcgtgctgacgtcagacaggcggctg
gtcctggacccggacgcgttggaagagcaggccgccgccgcgcgcttctgtttcacctac
ccgcaccacttcgacctgaccacggcggtgccagccgccgccaccggcgccaccacagcc
tcgccaggtgccgatgacgcctcggcgactgcggtggtgggcgagtcggttctgggcagt
cgctgtgtgggcgccttcagcggcgacgagcttctggatgccgcggcgctgtgccggcgt
ggctgcgagcgcgtggcgacgtttgcccggctcagcctcgccaagagcctacaggcggcg
ggaggcgcgtaa
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