Chlamydomonas reinhardtii: CHLRE_16g651000v5
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Entry
CHLRE_16g651000v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K07466
replication factor A1
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03030
DNA replication
cre03420
Nucleotide excision repair
cre03430
Mismatch repair
cre03440
Homologous recombination
cre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHLRE_16g651000v5
03420 Nucleotide excision repair
CHLRE_16g651000v5
03430 Mismatch repair
CHLRE_16g651000v5
03440 Homologous recombination
CHLRE_16g651000v5
03460 Fanconi anemia pathway
CHLRE_16g651000v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cre03000
]
CHLRE_16g651000v5
03032 DNA replication proteins [BR:
cre03032
]
CHLRE_16g651000v5
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_16g651000v5
Transcription factors [BR:
cre03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
CHLRE_16g651000v5
DNA replication proteins [BR:
cre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
CHLRE_16g651000v5
DNA repair and recombination proteins [BR:
cre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
CHLRE_16g651000v5
MMR (mismatch excision repair)
CHLRE_16g651000v5
DSBR (double strand breaks repair)
HR (homologous recombination)
CHLRE_16g651000v5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
DUF223
tRNA_anti-codon
DUF8448
Motif
Other DBs
NCBI-GeneID:
5723800
NCBI-ProteinID:
XP_001698157
UniProt:
A8J9G7
LinkDB
All DBs
Position
16:complement(1231701..1237827)
Genome browser
AA seq
647 aa
AA seq
DB search
MAATATLTSGDVARIKSKEDFANGVVLRVSELQEVGGKKHKCMLSDGNNSIRGVLASQFA
DLVASGELSNGCLIKITAFVTNTIGSDDVVLATDLSVVSPGTGIVKMEVDNALNARNSTP
EAAGKPQAKSSTADPDAKENSTPGPDFKSSKTPGPGLSPVSFFSPAPTPTGAGIKTAPTP
PSTMGVSDRKNHHKIAQLHPYETNWCIRAKVDRKAPLRALPSKPDVKVMTVDLVDETGTA
IQGTFWRGPAERMSEQLVEGKVYVFHKFKVKPADKKYVTVKNEYQIDFTDTTDVSEAADQ
DSSAMTTAVEVTPIEQLPRRIGQRAPVDVMGVVLALGSYGTVKRKADNSELPRREVTIGD
QSGKSVAITLWGDMSSTTAQQLEGMEGRAVLQVTGCRVTDYNGCSLSTLSKSVASINPET
PAAQQMMLWYKTSEMNPDRFTAVGADLVMARGSQGGSQGGAGGVPARERYFSLKDVSGLT
AETEALANDKAIFQNVTACVAMINNDDKNIFYLANPENGRKVVDQGGGRFWSEADSKVVE
KPEHRYLLSVRLADHTGETNVQLFGKEAEAVMGMRADELAALKEAGGEGFAGALKAAQWK
PWQVVVMSKAREYNGNRSVRHSAYKVENIDWVSESSRLVTLIAKYGN
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaccgcaaccttgacgtcgggtgatgtggctcgcatcaagtcgaaggaagat
tttgccaatggcgtggtgttacgggtatcggagctgcaggaggttggtgggaagaagcat
aaatgcatgctgtccgacggcaacaactctattcgcggagtgctggcctcgcagttcgcg
gacctggtcgcgtccggcgagctctctaatggctgcctcattaagataacagcatttgtg
accaacaccatcggcagcgatgatgtggtgctggccacggacctgtcggtggtgtcgcca
ggcaccggcatcgtaaagatggaggtggacaacgcgctgaacgcccgcaactccacgccc
gaggccgcgggcaagcctcaggccaagtctagcacggctgaccctgacgccaaggagaac
agcacgcctgggccggacttcaagtccagcaagacgccggggcccggcctgagccccgtg
tcattcttctcgccggcgcccacccccaccggcgccggcatcaagaccgcgcccacgccg
cccagcaccatgggtgtcagcgaccgcaaaaaccaccacaagattgcgcagctgcacccc
tacgagacaaactggtgcatccgcgccaaggtggatcgcaaggcgccgctgcgcgcgctc
ccctccaagcccgacgtcaaggtcatgacggtggacctggtggacgagacgggcacggcg
atccagggcaccttctggcgcggcccggctgagcgcatgagcgagcagctggtggagggc
aaggtgtatgtgttccacaagttcaaggtgaagcccgccgacaagaagtacgtcaccgtc
aagaacgagtaccagatcgacttcactgacaccacggacgtgtcggaggcggccgaccag
gacagtagcgctatgaccaccgctgtggaggtcacgcccatcgagcagcttccgcgccgc
atcggccagcgcgcgcccgtggacgtgatgggcgtggttctggctctgggcagctacggc
accgtgaagcgcaaggccgacaacagcgagctgccgcgccgcgaggtcaccatcggagac
cagagcggcaagagcgtggccatcacgctgtggggcgacatgtccagcaccaccgcgcag
cagctggagggcatggagggccgcgccgtgctgcaggtgactggctgccgcgtgacggac
tacaacggctgctcgctgtcaacgctgtccaagtcggtcgccagcatcaaccccgagacg
ccggcggcgcagcagatgatgctgtggtacaagacgtccgagatgaaccccgaccgcttc
acggcggtgggtgcggacctggtgatggcgcgcggcagccagggtggcagccagggcggc
gcgggtggcgtgccggcgcgcgagcgctacttctcgctcaaggacgtgagcggtcttacg
gcggagaccgaggcgctggccaacgacaaggccatcttccagaacgtgacggcgtgcgtg
gccatgatcaacaatgacgacaagaacattttctacctcgctaaccccgagaacggccgc
aaggtggtggaccagggcggcggccgcttctggagcgaggcggacagcaaggtggtcgag
aagcccgagcaccgctacctgctgtcagtgcgcctggcagaccacacgggggagaccaac
gtgcagctgtttggaaaggaggcggaggcggtgatgggcatgcgcgccgacgagctggcg
gcgctgaaggaggcgggcggcgagggctttgccggcgcgctcaaggcggcgcagtggaag
ccgtggcaggtggtggtcatgagcaaggcccgcgagtacaacggcaaccgcagcgtgcgg
cactcggcctacaaggtggaaaacatcgactgggtatccgaatccagccgcctggtcacc
ctcattgcaaagtacggcaactga
DBGET
integrated database retrieval system
