Chlamydomonas reinhardtii: CHLRE_16g672753v5
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Entry
CHLRE_16g672753v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03022
Basal transcription factors
cre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHLRE_16g672753v5
09124 Replication and repair
03420 Nucleotide excision repair
CHLRE_16g672753v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cre03021
]
CHLRE_16g672753v5
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_16g672753v5
Transcription machinery [BR:
cre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CHLRE_16g672753v5
DNA repair and recombination proteins [BR:
cre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CHLRE_16g672753v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
Strep_pep
DUF2096
HXXSHH
Ferritin
Motif
Other DBs
NCBI-GeneID:
5724826
NCBI-ProteinID:
XP_001699216
UniProt:
A8JBD7
LinkDB
All DBs
Position
16:complement(3470671..3473238)
Genome browser
AA seq
179 aa
AA seq
DB search
MEIDLEKELKVRRRILAIYNKDRDDFDSKEKFDDYLEEVEDIIWRLSNNVDIERTEAQVR
RYRSANQEQINSKSARQANMGADLHAAALDAIALAAVAAAKAAAPSMTGGLPMILPKLAQ
DYSALLEGGREVKYDSKVLAKSGSTAAAAGGWSASVWQSRLSKEAFSSLLWRYAELTPT
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgacctagaaaaggagctgaaagtgcgccgtcgtatattggccatatacaac
aaggaccgggatgactttgacagcaaggagaagttcgatgactacctggaagaagtggag
gacatcatttggcggctgtccaacaatgtggatatcgagcgcaccgaggcgcaagtgcgc
agataccgctcagcaaaccaggagcaaataaattccaagagcgcacgccaggcgaacatg
ggtgccgacctgcatgcggcggctctggatgcgatcgcactggcagctgttgccgcggcg
aaggctgctgcaccgtccatgacgggcggcctgcccatgattttacccaagctggcgcag
gactactctgcccttctggagggcgggcgggaggtgaagtacgactccaaggtgctggcc
aagtcaggctcgacagcggccgcagctggcggctggagcgcgagtgtgtggcaatcccgt
ctgtcgaaggaggctttttcgtcgctcctatggaggtatgctgagcttacaccgacatga
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