KEGG   Chlamydomonas reinhardtii: CHLRE_16g679950v5
Entry
CHLRE_16g679950v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K10756  replication factor C subunit 3/5
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03030  DNA replication
cre03410  Base excision repair
cre03420  Nucleotide excision repair
cre03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHLRE_16g679950v5
   03410 Base excision repair
    CHLRE_16g679950v5
   03420 Nucleotide excision repair
    CHLRE_16g679950v5
   03430 Mismatch repair
    CHLRE_16g679950v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cre03032]
    CHLRE_16g679950v5
   03036 Chromosome and associated proteins [BR:cre03036]
    CHLRE_16g679950v5
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_16g679950v5
DNA replication proteins [BR:cre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CHLRE_16g679950v5
  DNA Replication Termination Factors
   ELG1-RFC complex
    CHLRE_16g679950v5
Chromosome and associated proteins [BR:cre03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CHLRE_16g679950v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CHLRE_16g679950v5
  Check point factors
   HRAD17(Rad24)-RFC complex
    CHLRE_16g679950v5
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 RuvB_N Sigma54_activ_2 AAA_5 Rep_fac_C AAA_16 AAA_22 Mg_chelatase DUF815 AAA_11 nSTAND3 RsgA_GTPase AAA_23 AAA_29 ABC_tran
Other DBs
NCBI-GeneID: 5721546
NCBI-ProteinID: XP_001695879
UniProt: A8J3U8
LinkDB
Position
16:complement(5583241..5588513)
AA seq 356 aa
MPLWVDKYRPNSFDKFVVHKDIADNLKKLVATGDFPHTLFYGPPGAGKKTLVMALLRAIY
GAGVEKVRVETKPWKIDLPSRKLEVELTTLSSNHHLELNPADVGSNDRYVVQEIIKEMAR
SRPMGADGSRGFKVLVLNEVDRLSKEAQQGLRRTMEKYSSACRLIMVCSNVSKVMEPVRS
RCLCVRVAAPSDAQVMEVLQGVAKKENLVLPEAFAARVVDYAGRNLRRALLCLEVCRAQQ
YPFGDSQEPQRADWELYIAEVAKNIMDEQSPKQLYLVRSKLYELLANCVPPELIMRQLTF
ELLKRMDDEIKLETVSYAAQFEQRLQEGAKAIFHLEAFVARVMSNVKTYLVSCGLA
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcccctatgggtggacaagtatcgcccgaactcgtttgacaagttcgtcgtgcacaag
gatatcgcggacaacctcaaaaagctggtggcgacgggggactttccacacacgttattc
tatgggcccccgggagctggcaagaagacgctggtgatggcgcttctaagagccatctac
ggcgcaggcgtggagaaggtccgcgtggagacgaaaccatggaagattgatctgcccagc
cgcaagctggaggtggagctgaccacgctgtcgtcaaaccaccatttggagctcaacccc
gcggatgtgggcagcaacgaccgatacgtggtgcaggagatcatcaaggagatggcgcgc
agtcggccgatgggcgcggacggcagccgcgggttcaaggtcctggtgctgaacgaggtg
gaccggctgtccaaggaggcgcagcagggcctgcgccgcaccatggagaagtacagcagc
gcctgcaggctgatcatggtgtgcagcaacgtgtccaaggtgatggagccagtgcgctcc
cgctgcctgtgcgtgcgcgtggcggcacccagcgacgcgcaggtgatggaggtgctccag
ggcgtggccaagaaggagaacctggtgctgccggaggcctttgcggcgcgggtggtggac
tacgccggccgcaacctgcgcagggcgctgctgtgcctggaggtgtgccgcgcgcagcag
taccccttcggcgacagccaagagccgcagcgggcggactgggagctgtacattgccgag
gtggccaaaaacattatggatgagcagagccccaagcagctctacctagtccgcagcaag
ctgtacgagctgctggccaactgcgtgccgcccgagctcatcatgcgccagctcaccttc
gagctgcttaaacgaatggacgacgaaatcaagctggagacggtgtcatatgcggcccag
tttgagcagcggctgcaggagggcgccaaggccatcttccacctggaggccttcgtggcg
cgggtcatgagcaacgtcaagacgtacctggtctcgtgcggcctggcctag

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