Chlamydomonas reinhardtii: CHLRE_16g680117v5
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Entry
CHLRE_16g680117v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cre04121
]
CHLRE_16g680117v5
Enzymes [BR:
cre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CHLRE_16g680117v5
Ubiquitin system [BR:
cre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
CHLRE_16g680117v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf_RING_Vps8
zf-ANAPC11
Prok-RING_4
zf-HC5HC2H_2
zf-RING_Vps41
zf-RING_16
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
5724493
NCBI-ProteinID:
XP_042916239
UniProt:
A0A2K3CVY2
LinkDB
All DBs
Position
16:7108706..7113607
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AA seq
628 aa
AA seq
DB search
MTPSYALDPLPDIPADFGPDIPDEGIDGFLRSADPEDACTPLTFEDFDTPWIALIARQQQ
PHATNCTFDVKVMNAQAAGALAAIVYDDVYESLIIMSKPKGHPDPLIPAVFVSQKAGIIM
RKLMTLDVIRVRITPLSNVAWLSMLMSAFLGLLALGVVLATFYVMRSWSMWITGMHHRGM
ATNGVPAGPGGQHPGAAPRPPQQQDHGLPPDALRQLPVIVYEPPASKARTSATPSGEPSL
AASRSASLRPSGCWGPGGALEEEEDELEEQVQAQARDGVRAALMGSAAEARAARRGRDLE
QGCGEGAGACWEEEQEVMEQEQEEEEDRASRSSSDSGQCGALAAAVSGMRTPRPPGAHAG
ETKRTCAICLENYEEGEKIRVLPCAHRFHMTCVDQWLGNRRFCPVCKHDASLPLPQSQLP
AGAAGSSSANGAGGQRGGAGGGQVLNGWTLLMQGFMELMRPPRFPVRILQQVEAVQAQAQ
RQASGAPAGGGQPQPPPQQQQQQRGRRGRQQRRDRTELQEPLLLRGHQVEQLADIEAPRP
QPATSAGAAAVATAASGQGPINIPTPPAGAAAHGGTGAGAAGAAPRAASRAGPAARVRAV
LAGLLGQTAQAEPAVPGAAPQPQFPSTL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccagctacgcgttggaccccctgcccgacattcctgcggacttcggccccgat
atcccagatgaggggattgacgggttcttaaggtccgcggaccccgaggatgcgtgcacg
ccgctgacgtttgaggacttcgacacgccgtggattgccctgattgcgcggcagcagcaa
ccgcacgcgaccaactgtacctttgacgtcaaggtgatgaacgctcaggcggcgggcgcg
cttgctgccattgtgtacgatgacgtgtacgagagcctcatcatcatgtccaagcccaag
ggccacccggacccgctgatcccggcggtgtttgtgtcccagaaggccggcatcatcatg
cgcaagctcatgacgttggacgtcatccgcgtgcgcatcacgccgctgagcaacgtggcc
tggctgtccatgctcatgagcgccttcctggggttgctggcgctgggggtcgtgctggcc
acgttctacgtcatgcgctcatggagcatgtggatcacgggtatgcatcatcggggtatg
gccaccaacggcgtgccggccggccccggcggccagcacccaggcgccgcgccgcggccg
cctcagcagcaggaccacgggctgccgccggacgcgctgcggcagctgcccgtcatcgtg
tacgagccgccagcctccaaggcgcgcacctcggcgaccccctcgggcgagcccagcctc
gcggcctcgcgctccgcctcgctgcgtcccagcggctgctggggcccgggtggcgccctc
gaggaggaggaggacgagctggaggagcaggtgcaggcgcaggcgcgagacggtgtgagg
gctgcgttgatgggctcggcggccgaggcgcgggctgcgcggcggggcagggacctggag
cagggctgcggggagggagctggcgcctgctgggaggaagagcaggaggtcatggagcag
gagcaggaagaagaggaggaccgggcctctcgcagtagcagcgacagcggtcaatgcggc
gcgttggcagcggcggtcagcggcatgcgcacgccgcggccgccgggcgcgcacgcgggc
gagacgaagcgcacgtgcgccatctgccttgagaactacgaggagggcgagaagatccgc
gtgctgccctgcgcgcaccgcttccacatgacctgtgtggaccagtggctgggcaaccgc
cgcttctgccccgtgtgcaagcatgacgcctcgctgccgctgccgcagtcgcagctgccc
gccggcgcggcaggcagcagcagcgccaacggcgccggtgggcagcgcggcggcgccggt
ggcggtcaggtgctgaacggctggacgctgctgatgcagggcttcatggagctcatgcgc
ccgccccggttccccgtgcgcatcctgcagcaggtggaagccgtgcaggcgcaagcacag
cgccaggcctcaggcgcgccggcgggtggaggccagccccagccgccgccgcagcaacag
cagcagcaacgcggtcgccgcgggcggcagcagaggcgtgaccgcaccgagctgcaggag
ccgttgctgctgcgcgggcaccaagtcgagcagctggccgacattgaggcgccgcggccg
cagccagccacatctgctggcgcagctgctgtcgccaccgccgccagcggtcaggggccc
atcaacatacccacgccgcctgcgggtgcggcggcgcacggcggcactggggctggcgct
gcaggggccgcgccgcgcgctgcgagccgtgccggcccagcggcgcgtgtgcgggctgtg
ctagcggggctgttgggccagactgcacaggcggagccggcagtgcctggcgcagcgccg
cagccgcaattcccttcgacactgtga
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