Chlamydomonas reinhardtii: CHLRE_17g713900v5
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Entry
CHLRE_17g713900v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K08266
target of rapamycin complex subunit LST8
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre04136
Autophagy - other
cre04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
CHLRE_17g713900v5
04136 Autophagy - other
CHLRE_17g713900v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cre04131
]
CHLRE_17g713900v5
Membrane trafficking [BR:
cre04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
CHLRE_17g713900v5
mTORC2 complex
CHLRE_17g713900v5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Gbeta
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
DSE1_N
Beta-prop_WDR36-Utp21_1st
CFAP251_N
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
ASA1
Beta-prop_Vps41
NBCH_WD40
PAC11
Beta-prop_SPT8
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_IFT140_2nd
Beta-prop_WDR19_1st
Beta-prop_ACSF4
SHKBP1_KCTD3_C
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
VID27
Peptidase_C78
TPMT
Motif
Other DBs
NCBI-GeneID:
5725956
NCBI-ProteinID:
XP_001700456
UniProt:
A8JDD2
LinkDB
All DBs
Position
17
Genome browser
AA seq
315 aa
AA seq
DB search
MASSSVVLASAGYDHTIRFWEATSGCCYRTLQYAESQVNKLEITADKTRIAAAGNPQIRV
FDVNSPDPNPLLSYDGHAGNVTAVGFHKDGKWMFTGGEDGTVRVWDTRSPVCQRTYESRA
AVNSVVLHPNQGELISGDQTGHIRVWDLTASACSCELVPEIGTAVRSLTVALDGTMIVAA
NNNGTCYVWRMMRGASLTTHFEPLHKLKAHSNIILKCLISPDCQQLATTSADKTVKLWNL
DGFTLDRTLVGHTRWVWDCVFSVDAAYLVTASSDATARLWDLGSSEAIRTYSGHHKAVVC
CALNDSAIEGRDVDG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctctagcgtagtactagcttcagccggctatgaccacaccattcgattttgg
gaggcgacgagcggctgctgctaccggacgctgcagtatgcggagtcgcaagtgaacaag
ctagaaattaccgctgataagacgcggatagcggcagccggcaacccgcaaatccgggtc
tttgacgtgaattccccggatcccaacccgctgctgtcctacgatggccacgccggcaac
gtgacggcggtgggcttccacaaggacggcaaatggatgttcacaggcggcgaggacggg
acggtgcgcgtgtgggatacgcggtcgccggtgtgccagcgcacctacgagagccgcgcc
gccgtcaactcagtagtgctgcaccccaaccagggcgagctcatatcgggcgaccagacg
gggcacatccgcgtgtgggacctgacagcctccgcctgctcctgcgagcttgtaccggag
atagggacagcggtgcggtcgctgactgtggcgctggacggcaccatgattgtggcggcc
aacaacaacggcacctgctacgtgtggcgcatgatgcgaggtgcctccctgaccacccac
ttcgagccgctgcacaagctcaaagcgcactccaacatcattctcaagtgcctcatatca
cccgactgccagcagctcgccaccaccagcgccgacaagacggtcaagctgtggaacctg
gacggcttcacactggaccgcacgctggtgggccacacgcgctgggtgtgggactgcgtg
tttagcgtggacgcagcctacctggtcacagcctcctcggacgccactgcccgcctgtgg
gacctgggcagcagcgaagccatccgcacctacagcggccaccacaaggcggtggtgtgc
tgcgcgctgaacgactcggcgattgaggggcgcgacgtggacgggtaa
DBGET
integrated database retrieval system