Chlamydomonas reinhardtii: CHLRE_17g717800v5
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Entry
CHLRE_17g717800v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14309
nuclear pore complex protein Nup93
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHLRE_17g717800v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_17g717800v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CHLRE_17g717800v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
CAP_N-CM
FliG_C
Motif
Other DBs
NCBI-GeneID:
5729287
NCBI-ProteinID:
XP_042914655
UniProt:
A0A2K3CQ27
LinkDB
All DBs
Position
17:2673001..2682532
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AA seq
952 aa
AA seq
DB search
MATADWNSLLQQSNDLVGQEYNNVPRVERTLPQLQQYADALRSRTNRFRGPAEHAAATRL
LAQQGLDATRLTTEVVALEIVPTIEDVFHADTGNVEEYLQQVEEATLLAAIQEAQQESVA
SFESYMESCMARDWAANKRQLFGLIAPNNLVGAGPGGGGLGGGLGGGPQPLIGRTAGGGL
SFGAPALRLSPKEAAYVEVVKRMATQAAAATGAGGGGASGSGVDVVRDFLKACKDNEDKA
PGQDTHISSVWALLADVLAEAKQRGLAPSAPAGGAAGGGVAGGSGRYVEALAAGARKHLE
RGFKSHVRSTISRYKLAAERGADPDYLREVQAYVQVKFRDRGALDFAAPGGAGMDTSWIQ
LFYALRSGDDAAARRAADRCGELLLAAGGGGGLGGMGGGGLFGAGRAGLGGSSVRPLVDE
WLGGGCRLSERSAQALSREAERLLRDKNGLRHSPKAPYQALVCALLAGDARSMDALGGVL
QALQLPPILSTIEDFMWAKLAVVAGSSGGGAAGGGAAAGAAAAASGGVVAGVQPYSLADL
QADINRWPPQYYSKQSREPLLYVTVLVLSLQLGAALRFLWRDDTAKPYRLDAVHMGLALQ
AEGALAALGAVSDASAASSNSASTSSAAAAASADVATMALAYGRKFLAAGDAATALYYYW
LAAGARGGGLAVKGALLRELLAGGRDFGTLLGGGGAGARGALHALVPDPEERRRLFEGVA
YECQMCAQPEEAVELYLAADRPTAALSLINSQMSAAIAAAADEAAAAAPGGGAMSPAPGS
APAADRLERIARSGRAAAERLTGVRLAPGAPPPAAAAPSAAVAADPAARRELEAFWQLGV
IRDLLVAARRGRHDQALQRLSELPFIPTERSRLDLCVRMSTQLHPAIAERLQDIISTAAD
SIAARRQQVGREAAAGLAGELAVITAYANSMAGARLPQAVYRKLAEAQVFMS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggactggaattcgctgttgcagcaatccaatgacctagtggggcaggag
tacaacaatgtcccccgtgtggagcggacattgcctcaactccagcaatatgccgacgcg
ctccggtcgcgcacgaaccgctttcggggccccgccgagcacgccgcggccacgcgcctg
ctggcgcagcagggtctggatgcgaccaggctgaccactgaggtggtggccctggagatc
gtgcccaccatcgaggacgtgttccacgccgacacgggcaacgtggaggagtacctgcag
caggtggaggaggccacactgctggcggccatacaggaggctcagcaggagtcggtcgcc
tccttcgagtcctacatggagagctgcatggcgcgcgactgggccgccaacaagcgccag
ctgttcggactcattgcgccgaacaacctggtcggcgccgggccgggcggcggcggactg
ggcggcgggctgggcggcggaccgcagccgctgatcggccgcaccgcgggcggtgggctg
tcgttcggcgctccggctctgcggctgtcgcccaaggaggcggcgtacgtggaggtggtg
aagcgcatggccacgcaggcggcggcggccacgggcgcgggcggcggcggcgccagcggc
tcgggcgtggacgtggtgcgggacttcctcaaggcgtgcaaggacaatgaggacaaggcc
cccggccaggacacgcacatctccagcgtgtgggcgctgctggcggacgtgctggcggag
gccaaacagcgcggcctggcgccctcggcaccggcaggcggcgcggcgggcggtggcgtg
gcgggcggcagtgggcgctatgtggaggcgctggcggcgggcgcacgcaagcacctggag
cgcggcttcaagtcgcacgtgcgctccaccatcagccgctacaagctggcggcggagcgc
ggcgccgaccccgactacctgcgggaggtgcaggcatacgtgcaggtcaagttccgtgac
cgcggcgcgctggacttcgcggccccgggcggcgccggcatggatacctcctggatccag
ctcttctacgccctgcgctccggcgacgacgccgccgcgcgccgcgccgccgaccgctgc
ggcgagctgctgctggcggcaggcggcggcggcgggctgggcggcatgggcggcggcggc
ttgttcggcgcgggccgggcggggctgggcggcagcagcgtgcggccgttggtggacgag
tggctgggcggcggctgccggctgtcggagaggtcggcccaggctctgtcgcgcgaggcg
gagcggctgctccgcgacaagaacggactgcgccacagccccaaggcgccctaccaggcg
ctggtgtgtgcgctgctggccggcgatgcccgctccatggacgcgctgggcggcgtgctg
caggcgctgcagctgccgcccatcctgtccaccattgaggacttcatgtgggccaagctg
gccgtggtggcgggtagcagcggcggcggcgcggcaggtggcggcgccgccgctggcgcg
gctgctgctgcttcgggcggtgtggtggcgggcgtgcagccttacagccttgcggacctg
caggcagacatcaaccgctggccgccgcagtactacagcaagcagagccgcgagccgctg
ctgtacgtgacggtgctggttctgagcctgcagctgggcgcggcgctgcgcttcctgtgg
cgtgacgacaccgccaagccctaccgcctggacgcggtgcacatggggctggcgctgcag
gcggagggcgcgctggcggcactgggcgccgtgtccgatgcctccgccgcctcctccaac
tccgcctccacctcctccgccgcggccgccgcctcggccgacgtggctacaatggcgctc
gcctacggccgcaagttcctggccgcgggcgacgccgccacggcgctgtactactactgg
ctggcggcgggggcgcgcggcggcggactggcggtcaagggcgccctgctgcgtgagctg
ctggcgggcggccgcgacttcggcacgctgctgggcggcggcggcgcgggggcgcgcggg
gcgctgcacgcgctggtgcccgaccccgaggagcgccggcgcctgttcgagggcgtagcg
tacgagtgccagatgtgcgcccagcccgaggaggcggtggagctgtacctggccgccgac
cgacccaccgccgcgctgtcgctcatcaacagccagatgagcgccgccattgcggcggcg
gcggacgaggcggcggcggcggcgccaggcggcggagccatgtcgccggcaccgggctcg
gcgcccgcggcggatcggctggagcgcatcgcgcgcagcggccgcgccgccgccgagcgc
ctcacgggtgtacggctggcgcccggcgcgccgccgcccgccgccgccgcgccgtctgcg
gccgtggcggctgacccggcggctcgacgcgagctggaggcgttctggcagctgggcgtg
atccgcgacctgctggtggcggcgcggagggggcggcacgaccaggctctgcagcggctg
agcgagctgcccttcatccccaccgagcgctcccgcctggacctgtgcgtgcgcatgagc
acacagctgcacccagccatcgcggagcggctgcaggacatcatatccaccgccgccgac
agcatcgcggcccggcggcagcaggtggggcgcgaggcggctgcgggcctggcgggcgag
ctggcggtcatcaccgcctacgccaacagcatggcgggcgcgcggctgccgcaggccgtg
taccgcaagctggcggaggcgcaggtgttcatgtcgtaa
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