Chlamydomonas reinhardtii: CHLRE_24g755347v5 Help Entry CHLRE_24g755347v5 CDS       T01039                                  Name (RefSeq) uncharacterized protein   KO K12815   pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6] Organism cre  Chlamydomonas reinhardtii Pathway cre03040   Spliceosome Brite KEGG Orthology (KO) [BR:cre00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CHLRE_24g755347v5  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cre03041]     CHLRE_24g755347v5 Enzymes [BR:cre01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      CHLRE_24g755347v5 Spliceosome [BR:cre03041]  Complex C   Other components    Step II factors     CHLRE_24g755347v5 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HA2_C OB_NTP_bind Helicase_C DEAD HA2_N AAA_22 Flavi_DEAD AAA_19 nSTAND3 AAA_30 SLFN-g3_helicase ATPase AAA_7 Microtub_bd NB-ARC AAA_16 T2SSE ABC_tran SRP54 PhoH AAA_24 Motif Other DBs NCBI-GeneID:  5727815 NCBI-ProteinID:  XP_042914117 UniProt:  A0A2K3CN31 LinkDB All DBs Position Unknown AA seq 1334 aa AA seqDB search MADRLDPPADSEEAGGLLVRPERPVFKAPAPRTSMLGLDKLAAQKRAELAERESKRVKLS YEEDPDASNPQATATATATATASGGGGGGGSSSTMPPPGGERRFRGQRTETPSHPGGVNS AALESLAEHKERQRQRERSGLYASTSAGDRGDRGGDRDGDRGGDRGGRERDGGRERDGGR GDREGGRDSRDRDGRDSRDRGGGSSNHNNSNSNNVHNDDELQRSDARFQQHLERYRQDRD RGGGGGGGGGGGSSRDRGRDERGRDGSSSGGGGGGRDSRDHRDRDGGDRGRDGDRGRGRD YGGGGGGGGGGRDRDGRPGGGSGARRSDWDNTTPVRRGAGGDDEWALTPVVASGRAGADP SRPGGSSRPGAPRSSHASGGWGAGGDTPLPAAAVPAGGAAVPSGRSGAGGGGGGGGGAGG FGRVQFDTAPSPALTPSWKSSSWNRQGGGAGGGGGGKGGRGPVERSPDLRPEGEEAPPPG ADEFDEVYAREREDEERQMERDWYDQEEFGGGTDDHGTSRFVGDEALFERRTADLQRRVR KDGSTMSLAATRRANELDKAMNAWEENRLLTSGVVRLKEVSLDFNDEDEARVLLLVHDTK PPFLEGKVVNNKQADIVLPLKDPTSDMAVIARKGSGLVKEVREKKEKNKSRQRFWEVAGS KMAEITGLTDAEAQAAAEAEAARKAEDGGDGEDGEGSYKQANQFKNHMKKNEANSDFSRN KTLEQQRRSLPVYGVRDELLQVIRENQVVVVVGETGSGKTTQMTQYLHEDGYTKYGTIGC TQPRRVAAMSVAKRVSEEMGVELGDQVGYSIRFEDCTSDKTIIKYMTDGVLLRETLINED VDNYSVVVMDEAHERSLNTDVLFGILKRVVARRRDFKLIVTSATLDAQKFSDFFGSVPIF IIPGRTFPVDVLWSRTVQEDYVEAAVKQAVTIHLRDPPGDILIFMTGQEEIEATCFSLAE RLEHMRSGGSEIPELLILPIYSQLPSDLQAKIFDKAEEGVRKVIVSTNIAETSLTVDGIL YVIDTGYVKMKVYNPKMGMDALQVFPISQAAAGQRSGRAGRTGPGTCYRLYTESAFRHEM LTMNVPEIQRTNLANVVLLLKSLKVNDLLEFGFMDPPPRDNIVNSMYNLWTLGALDNTGG LTHLGRQMVEFPLDPPLAKMLLMGAQLGCSNEVLTVVSMLSVPPVFFRPPDRAEESDAAR EKFFVPESDHLTLLHVYNQWKNNGYRGDWCDRHYLQSKGLRKAKEVRQQLADIMQQCGLQ LTSAGSDWDIVRKAICSAYFQNAAKFKSVGEYVNARTGMPCHLHPSSALYGLGFTPDYIV YHELVFTTKEYMQL NT seq 4005 nt NT seq  +upstreamnt  +downstreamnt atggcggatcgcctggacccgcctgccgactcggaggaggcaggcgggctgctggtgcgc ccggagcgcccggtcttcaaggccccggcgccccggacctccatgctaggcctggacaag ttggcggctcagaagcgggcggagctggcggagcgcgagagcaagcgcgtgaagctgtcc tacgaggaggacccggacgccagcaacccacaagcgactgctactgctactgctactgct actgccagcgggggcggcggcggcggcggcagtagcagcaccatgccgccgcctggcggc gagcggcgcttccgcggccagcgcacagagacgccgtcacacccgggcggcgtcaactcg gcggcgctggagtctctggcggagcataaggagcgccagcggcagcgcgagcgcagcggt ctgtacgcctccacctcggcaggagaccggggagacaggggcggagacagggacggagac aggggcggagacaggggcggcagggagcgggatggaggcagggagcgggatggaggcagg ggagaccgggagggcggccgcgacagcagggacagggacggcagggacagccgggaccgt ggcggcggcagtagcaaccacaacaacagcaacagcaacaacgtccataacgacgacgag ctgcagcgctcggacgcgcgcttccagcagcacctggagcgataccgccaggaccgagac cgcggcggcggcggcggcggcggcggcggtggcggcagtagcagggaccgggggcgggac gagcgcgggcgcgacggcagtagcagcggcggcggcggcggcggccgcgacagccgagac caccgcgaccgcgacggcggcgacaggggccgcgatggcgaccggggtcgggggcgggat tacggcggcggtggcggcggcggcggcggcggcagggaccgtgatggccggccgggcggc ggcagcggcgcgcggcgcagcgattgggacaacacgacgccggtgcggcgcggcgcgggc ggcgacgatgagtgggcgctgacgccggtggtggcgtcggggcgggcgggtgcggacccg tcacgccccggcggctcctcccgcccaggcgcgccgcgctcctcccacgccagcggcggc tggggcgccggtggcgacacgccactgcccgccgccgccgtacccgccggcggcgccgcc gtgccgtccggccgcagcggcgcgggcggcggcggcggcggcggcgggggtgccgggggt tttgggcgtgtgcagtttgacacggcgcccagcccggcgctcacgccgtcgtggaagagc agtagctggaaccggcagggcggcggcgcgggcggcggcggcggcggcaagggcgggcgg gggccggtggagcggtcgcccgacctgcggcccgagggcgaggaggccccgccgcccggc gcggacgagttcgacgaggtgtatgcgcgcgagcgcgaggacgaggagcggcagatggag cgcgactggtacgaccaggaggagtttggcggcggcacggacgaccacggcacctcgcgc ttcgtgggagacgaggcgttgttcgagcgccgcaccgccgacctgcagcgccgcgtgcgc aaggacggcagcaccatgtcgctggccgccacccgccgagccaacgagctggacaaggcc atgaacgcatgggaggagaaccgactgctcacgtcgggtgtggtgcggctcaaggaggtg tctctggacttcaacgacgaggacgaggcacgtgtgttgctgctggtgcacgacaccaag ccgcccttcctggagggcaaggtggtcaacaacaagcaggccgacatcgtgctgccgctc aaggaccccacctccgacatggccgtcatcgcgcgcaagggcagcgggctggtcaaggag gtccgcgagaagaaggagaagaataagagccggcagcgcttctgggaggtcgcaggctcc aaaatggctgagatcacgggcctcaccgacgccgaggcgcaggcggcggcggaggcggag gcggcgcgcaaggccgaggacggcggcgacggcgaggacggcgagggcagctacaagcag gccaaccagttcaagaatcacatgaagaagaacgaggccaactcggacttcagtcgtaac aagacgctggagcagcagcgccgcagcctgcccgtttacggcgtgcgggacgagctgttg caggtgatccgtgagaaccaggttgtggtggtggtgggcgagaccggcagcggcaagacc acacagatgacgcagtacctgcatgaggacggatacaccaagtacggcaccatcggctgc actcagccccgccgcgtggccgccatgagtgtggccaagcgcgtcagcgaggagatgggc gtggagctgggggaccaggtgggctactccatccgcttcgaggactgcacctccgacaag accatcatcaagtacatgaccgacggcgtgctgctgcgcgagaccctgatcaacgaggac gtggacaactacagtgtggtggtgatggacgaggcgcacgagcgctccctcaacacagac gtactgttcggcatcctcaagcgcgtggtggcgaggaggcgtgacttcaagctgatcgtc acctccgccaccctggacgcccagaagttctccgactttttcggctccgtgcccatcttc atcatcccaggccgcaccttcccggtggacgtgctgtggagccgcacggtgcaggaggac tatgtggaggcggcggtgaagcaggcggtcaccatccacctgcgagacccgcccggggac atcctcatcttcatgacgggccaggaggagattgaggccacctgcttcagcctggcggag cggctggagcacatgcgcagcggcggtagcgagatccccgagctcctcatcctgcccatc tactcgcagcttccgtcggacctgcaggccaagatcttcgacaaggcggaggagggcgta cgcaaggtcatcgtgtccaccaacatcgcggagacgtcgctcaccgtggacggcatcctg tacgtcattgacaccggctacgtcaagatgaaggtgtacaaccccaagatgggcatggac gcgctgcaggtattccccatcagccaggcggcggcggggcagcgcagcggtcgcgcgggc cgcaccggccccggcacctgctaccgcctgtacaccgagagcgcgttcaggcacgagatg ctaaccatgaacgtgcccgagatccagcgcaccaacctggccaatgtggtgctgctgctc aagagcctcaaggtgaacgacctgttggagtttgggttcatggacccgccgccgcgtgac aacatcgtcaactccatgtacaacctgtggacactgggggcgctggacaacacaggcggg ctgacgcaccttggccgccagatggtggagttcccgctggacccgccgttggccaagatg ctgctcatgggcgcacagctgggatgcagcaacgaggtgctaactgtggtgtccatgctg tccgtgccgcccgtgttcttccgcccgcccgaccgagccgaggagtccgacgccgcacgc gagaagttcttcgtgccggagtccgaccacctcacactgctgcacgtgtacaaccagtgg aagaacaacgggtacaggggcgactggtgtgaccggcactacctgcagtccaagggcctg cgcaaggccaaggaggtgcgtcagcagctggcggacatcatgcagcagtgcgggctgcag ctcacctccgccggcagcgactgggacatcgtgcgcaaggccatctgctcggcgtacttc cagaacgccgccaagttcaagtctgtgggcgagtacgtgaacgcgcgcaccggcatgccc tgccacctgcaccccagctctgccctgtacgggctgggcttcactcccgactacatcgtg taccacgagctggtgttcaccaccaaggagtacatgcagctttag

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