Chlamydomonas reinhardtii: ChreCp033 Help Entry ChreCp033         CDS       T01039                                  Symbol rpoA Name (RefSeq) RNA polymerase alpha subunit   KO K03040   DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Organism cre  Chlamydomonas reinhardtii Pathway cre03020   RNA polymerase Brite KEGG Orthology (KO) [BR:cre00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     ChreCp033 (rpoA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cre03021]     ChreCp033 (rpoA)    03400 DNA repair and recombination proteins [BR:cre03400]     ChreCp033 (rpoA) Enzymes [BR:cre01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      ChreCp033 (rpoA) Transcription machinery [BR:cre03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      ChreCp033 (rpoA) DNA repair and recombination proteins [BR:cre03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       ChreCp033 (rpoA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_A_bac RNA_pol_L Motif Other DBs NCBI-GeneID:  2717004 NCBI-ProteinID:  NP_958389 UniProt:  Q8HUH2 LinkDB All DBs Position CP Genome browser AA seq 550 aa AA seqDB search MTIYPNLKKIMTKTQSTDFFIACKESRIENNTNFYGCFYLGPFDESLSQTLANDLRRTLL SELTGLAITSIEIEGVLHKFSTLTGMKEPVLDLICNLQNIVLRKETISSTNMNYRATKKT YIGFLSVNGPRVIKAADLKLPAGLQCVDPNQYIATLAEDGFLNMKFNINEGKNYIKQKPY NLDVTTLKKRNILLQNFKNKIGLTALKNKQLMSTTMEGKPLLSNSDNLRFKKSFKRMLTS PNQSLKNKTSLGHDTVSNPIPLDAVFMPVTKINCIIEENNVYSDFSTDPSLEFSTHLVPS LTTQTNLRQESTHKFVNKANSLLQENNLFRSEKVYLPNIYIPEGEGDALSLKGVSPYSDF KTFLSTLNYNSLYQTSLFLNQSLGQNKLLPWQANTLFFDVTNFADSQSNDVNMNMDLAGD KTSVQKIHSTGISNTDAQLNKLSLTKIKSFLGSSDKLQNKTYQSFLQPKYASSNLRTLLT QRSLQKNQSVFMHSFLDDQAKHKELTSNTLRANKFQVMKTVVSIPPKTFKTNPINTFHNQ SLTFEYARKF NT seq 1653 nt NT seq  +upstreamnt  +downstreamnt atgacaatttatccaaatttaaaaaaaatcatgacgaaaactcaaagtacagattttttt attgcctgtaaagaatcacgtattgaaaataatactaatttttatggttgtttttatcta ggaccgtttgacgaaagtttaagtcaaacgttagctaatgatttaagacgtacactttta tcagaattaactggtttagctataacatctattgaaattgaaggcgtactacataaattt tcgactttaaccggtatgaaagaaccggttttagatttaatttgtaatctacaaaatatt gtgttacgtaaagaaacaattagttcaacaaatatgaattatcgagcaacaaaaaaaaca tatattggttttttaagtgtaaatggcccacgtgtaattaaagccgctgacttaaaacta ccagcaggtttacaatgtgtagatcctaatcaatatattgcaacattagctgaggatggt tttttaaatatgaaatttaacattaacgaaggaaaaaattatattaaacaaaaaccttat aatttagatgtgacaactttaaaaaaacgcaatattttacttcaaaattttaaaaataaa attggtttaacagctttaaaaaataaacaattaatgtctactactatggaaggtaaacct ctattgagcaattcagataatttacgttttaaaaaaagctttaaacgtatgttaacaagt ccaaaccaaagtttaaaaaacaaaacctctttaggccatgatacagtaagtaatccaatt cctttagatgctgtttttatgcctgtaaccaaaattaattgtattattgaagaaaataat gtgtattcagattttagtactgacccatctttagagttttctacccatttagttccttcg cttacaactcaaacaaatctacgacaagaaagtacgcataaattcgttaacaaagcaaat tcacttttacaagaaaataatctatttaggtctgaaaaagtttacttacccaatatttat attcccgaaggggaaggggacgctctttcacttaaaggtgtatcaccatatagtgatttt aaaacatttttatctacattaaattataattccttatatcaaacttctttatttttaaat caatcgttaggtcaaaataagttattaccatggcaagccaatactttattttttgatgta acaaattttgcagattcgcaatctaatgacgtaaacatgaatatggatttagcaggagac aaaacctctgttcaaaagatacactcaacaggcatttcaaatactgatgcacaattaaat aaattgtcattaacaaaaattaaatcttttttaggtagttctgataaattacaaaataaa acatatcaatcttttttacaacctaaatatgctagtagcaatttacgcacgttacttact caacgtagtttacaaaaaaatcaatccgtttttatgcattcttttttagacgatcaagct aaacataaagaattaactagtaatacccttcgtgccaataaatttcaagtaatgaaaacg gttgttagcattccaccaaaaaccttcaaaacaaatcctattaatactttccataatcaa agtcttacttttgaatatgcaagaaaattttaa

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