Corynebacterium rouxii: FRC0190_01499
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Entry
FRC0190_01499 CDS
T06840
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
crf
Corynebacterium rouxii
Pathway
crf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRC0190_01499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crf03019
]
FRC0190_01499
Messenger RNA biogenesis [BR:
crf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FRC0190_01499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
VZH85545
UniProt:
A0A6I8MGI1
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All DBs
Position
1:complement(1491769..1493823)
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AA seq
684 aa
AA seq
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MTEPRSRARKVTRKAGPPEAAETPVFQAPDSAATAEPAESAVKNSEKNEKDSSVESSRNN
RGRNTQRGGRNRRGNGSSNRSSQSKNNQSNNRGRRTPVKSMQGADLTQRLPEPPKAPKNG
LRIYALGGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIENKLDKVD
ALVITHGHEDHIGAIPWLLKLRPDMPILASKFTMALIAAKCREHHQRPKLIEVNEKSDIN
RGPFNIRFWAVNHSIPDCLGVAIKTGAGLVIHTGDVKLDQTPPDGRPTDLPALSRFGDEG
VDLLLCESTNATVPGFSGSEAGVAPTLKRLISDAKQRVILASFASNVYRVQAAVDAAVAA
GRKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDAAKMAPHKVVLITTGTQGEPMAAL
SRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVMNMLSQIGATVVTGRDAKVHTSGH
GFAGELLFLYNAARPKNVMPVHGEWRHLRANKELAISTGVEEDRVVLAQNGVVVDLVDGR
ARVVGQMQVGHLYVDGVTMGDIDAEVLEERTSLGEGGLIAITAVIDSRTARLLERPTVQA
KGFSEDAVAMMPEVTELVEKTMNDLAAEGENDPYRMVQQLRRRVSRFVEQKWRRKPMIMP
TVIPTTSATIDIDDADVRASRESQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacctcgtagccgtgcgcgcaaggttacccgtaaagctggtcctccggaagct
gcagagacgccagttttccaagcacctgattctgctgcaacggctgagccggcagaatct
gccgtaaagaactccgaaaagaatgaaaaagattcttctgtggagtcctcacgaaacaac
cgcggacgcaacactcaacgcggtggtcgtaatcgtcgtggtaatggttcttctaaccgt
tcttcacaatcgaagaacaaccagtccaacaacagaggacgacgcacccctgtgaagtca
atgcagggtgctgatcttacgcagaggctgcctgagccacctaaggctccgaagaacggc
ctacgtatttatgccctaggtggcatttctgagattggtcgtaatatgaccgtcttcgaa
tacaacaatcgtttgctgatcgttgactgtggtgttctgttcccatcttcgggtgagccg
ggagtggaccttatccttccggattttggaccgatcgagaataagctcgacaaagttgat
gctttggtaatcactcacggtcacgaagatcacattggcgcaatcccatggctgctaaag
ctgcgtccggatatgcctattctggcttccaagttcactatggcattgattgctgcaaag
tgtcgtgagcaccatcagcgtccaaagctaattgaagtaaacgagaagtcggatatcaac
cgcggtccgttcaacatccgattctgggcggtaaaccactcgattcctgattgcctcggc
gttgctattaagacaggcgctggtttagttatccatactggcgacgtaaagcttgatcag
accccgccagatggtcgtccaaccgacttgccggcactttctcgtttcggtgatgagggc
gtggatttgcttctttgtgagtcaaccaatgcaacagttccgggattctctggttctgaa
gcaggcgttgctccaactttgaagcgcctgatcagtgatgcaaagcagcgtgttatcttg
gcatcgtttgcatcgaacgtctaccgtgttcaggcagccgttgatgctgctgttgctgca
ggtcgtaaggtagcgttcaatggtcgctccatgattcgaaatatggaaatcgccgagaag
atgggctatttgaaagcacctcgcggcaccattgtcagcatggatgatgcagccaagatg
gctccacacaaggttgtactaatcacgactggtacacaaggtgaacctatggctgctttg
tcgcgtatggcacgtcgtgagcatcggcagatcaccgttcgcgatggtgatttgatcatc
ctgtcgtcttctttggttcctggtaacgaggaagctgttttcggcgtaatgaatatgctg
tcccagattggtgcgaccgtagtaactggccgtgatgccaaggtgcacacgtcgggacac
ggattcgctggcgagttgctgttcctctacaacgctgctcgtccaaagaacgtcatgccg
gttcacggcgaatggcgacacctgcgggctaacaaggaactagccatttctaccggtgtc
gaggaagaccgagtcgtactagctcaaaacggtgttgtggttgacctcgttgatggtcgc
gctcgtgttgtcggtcagatgcaggttggacatctttatgttgatggtgtgaccatgggt
gatattgatgctgaggttttggaggagcgtacttccttgggtgaaggcggcttgatcgct
attaccgcagtgattgattcgcgaactgcccgattgcttgagcgtccgacagttcaagcc
aagggattctctgaggatgccgtcgcgatgatgccagaggtgactgagctggttgaaaag
acgatgaatgatctggccgcagaaggtgaaaatgatccatatcgtatggttcagcagctg
cgccgtcgtgtttcgcgattcgtcgagcagaagtggcgccgtaagccaatgattatgcca
acggtcatcccaactacgtcagcgaccatcgatatcgatgatgctgatgttcgtgcaagc
cgcgaaagccagtag
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