Corynebacterium rouxii: FRC0190_01567
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Entry
FRC0190_01567 CDS
T06840
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
crf
Corynebacterium rouxii
Pathway
crf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FRC0190_01567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crf03400
]
FRC0190_01567
Enzymes [BR:
crf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FRC0190_01567
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FRC0190_01567
DNA repair and recombination proteins [BR:
crf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FRC0190_01567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
AC_1
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
VZH85617
UniProt:
A0A6I8MD07
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All DBs
Position
1:complement(1571488..1572378)
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AA seq
296 aa
AA seq
DB search
MPELPEVEVVRRGLTPFVLGATIIDVAVEHPRSIRTVEGGAGELIGSIQGREITRIGRRG
KFLWFELADHGDSTCGASQQGLLIHLGMSGQMLIKTHDSTLHSHRRIRTTIVRPDAQESY
ELWFVDQRTFGYWAPTTFVETAHGCVPEQITHIARDLLDPQLEREDLARLIRTKNSEIKR
VLLNQEIVSGIGNIYADEMLWAAQIHPQTPASHLSVAQLSNLLEHGQRVMNAALVQGGTS
FDSLYVNVNGQSGYFDVSLHAYGQQGRACDRCGMNIIREKFANRSSHFCPRCQLMR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgccagaagttgaggttgtacgccgcgggcttactccctttgtgcttggc
gcaactatcatcgatgttgctgttgagcatccccgcagcattaggacagttgaaggtggg
gccggcgaactcatagggtcaatacaaggtcgtgagatcactcgtataggtcgccgtggc
aaatttttgtggttcgagctcgcagaccatggcgactctacatgtggagcttcccagcag
gggcttctgattcatttgggtatgagcggccaaatgttgatcaaaacccacgattcgact
ctgcattctcatcgtagaattcgtaccacgattgtccgcccggatgctcaagaaagctat
gagctttggtttgttgatcagcgcacttttggttattgggcgccgaccacatttgtagaa
accgctcacggctgcgttccagaacagatcacccacattgcacgtgatcttttagatcct
caactcgaaagagaagatcttgcgcgattgatccgtacgaaaaatagtgaaattaaaaga
gtcctgcttaaccaagaaattgtctctgggatcggcaatatttacgccgatgagatgttg
tgggctgcgcaaattcatccgcaaactccagcctcgcatttgtctgtcgcacagttaagt
aatttgctcgaacacggtcagcgagtcatgaacgccgctttagttcaaggcggaactagc
ttcgactctctttatgttaacgtcaatgggcaatcgggttattttgatgtatctcttcat
gcctacggtcaacaaggtcgagcgtgcgatcgctgtgggatgaatattatccgtgaaaag
tttgctaaccgctcgagtcatttttgcccacgttgtcagcttatgcgctag
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